RNA–Protein interactions for RNA: ENST00000489030.1

USP11-210, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 2

Gene USP11, Length 340 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-210ENST00000489030 CLEC10AQ8IUN9 316 aa13.92□□□□□ -0.18
USP11-210ENST00000489030 LPAR1Q92633 364 aa13.92□□□□□ -0.18
USP11-210ENST00000489030 ZNF512BQ96KM6 892 aaPredicted RBP13.92□□□□□ -0.18
USP11-210ENST00000489030 MOV10L1Q9BXT6 1211 aaKnown RBP13.92□□□□□ -0.18
USP11-210ENST00000489030 RWDD1Q9H446 243 aaPredicted RBP13.92□□□□□ -0.18
USP11-210ENST00000489030 CWC22Q9HCG8 908 aaKnown RBP13.92□□□□□ -0.18
USP11-210ENST00000489030 SERPINB13Q9UIV8 391 aa13.92□□□□□ -0.18
USP11-210ENST00000489030 ATP11BQ9Y2G3 1177 aa13.92□□□□□ -0.18
USP11-210ENST00000489030 PCDHB15Q9Y5E8 787 aa13.92□□□□□ -0.18
USP11-210ENST00000489030 MYH1P12882 1939 aa13.92□□□□□ -0.18
USP11-210ENST00000489030 CYP2D6P10635 497 aa13.91□□□□□ -0.18
USP11-210ENST00000489030 TRIM60Q495X7 471 aa13.91□□□□□ -0.18
USP11-210ENST00000489030 CERKLQ49MI3 558 aaPredicted RBP13.91□□□□□ -0.18
USP11-210ENST00000489030 FAM109BQ6ICB4 259 aaPredicted RBP13.91□□□□□ -0.18
USP11-210ENST00000489030 LBX2Q6XYB7 198 aa13.91□□□□□ -0.18
USP11-210ENST00000489030 RIOK1Q9BRS2 568 aaKnown RBP13.91□□□□□ -0.18
USP11-210ENST00000489030 EHD4Q9H223 541 aa13.91□□□□□ -0.18
USP11-210ENST00000489030 PPP4R2Q9NY27 417 aa13.91□□□□□ -0.18
USP11-210ENST00000489030 LTBP2Q14767 1821 aa13.91□□□□□ -0.18
USP11-210ENST00000489030 EYSQ5T1H1 3165 aa13.9□□□□□ -0.18
USP11-210ENST00000489030 TRIM43BA6NCK2 446 aa13.9□□□□□ -0.18
USP11-210ENST00000489030 DNM1LO00429 736 aa13.9□□□□□ -0.18
USP11-210ENST00000489030 ITGB8P26012 769 aa13.9□□□□□ -0.18
USP11-210ENST00000489030 ADORA2AP29274 412 aa13.9□□□□□ -0.18
USP11-210ENST00000489030 CCNA1P78396 465 aa13.9□□□□□ -0.18
USP11-210ENST00000489030 SLC44A5Q8NCS7 719 aa13.9□□□□□ -0.18
USP11-210ENST00000489030 BADQ92934 168 aa13.9□□□□□ -0.18
USP11-210ENST00000489030 TRIM43Q96BQ3 446 aaPredicted RBP13.9□□□□□ -0.18
USP11-210ENST00000489030 CDX2Q99626 313 aaPredicted RBP13.9□□□□□ -0.18
USP11-210ENST00000489030 LBHD1Q9BQE6 289 aaPredicted RBP13.9□□□□□ -0.18
USP11-210ENST00000489030 TTYH1Q9H313 450 aaPredicted RBP13.9□□□□□ -0.18
USP11-210ENST00000489030 NOP58Q9Y2X3 529 aaKnown RBP13.9□□□□□ -0.18
USP11-210ENST00000489030 TTC28Q96AY4 2481 aa13.9□□□□□ -0.18
USP11-210ENST00000489030 VCANP13611 3396 aa13.89□□□□□ -0.19
USP11-210ENST00000489030 MYCNP04198 464 aaPredicted RBP13.89□□□□□ -0.19
USP11-210ENST00000489030 GABPAQ06546 454 aa13.89□□□□□ -0.19
USP11-210ENST00000489030 HDAC1Q13547 482 aaPredicted RBP13.89□□□□□ -0.19
USP11-210ENST00000489030 SLFNL1Q499Z3 407 aa13.89□□□□□ -0.19
USP11-210ENST00000489030 SLC39A5Q6ZMH5 540 aa13.89□□□□□ -0.19
USP11-210ENST00000489030 SIAH1Q8IUQ4 282 aa13.89□□□□□ -0.19
USP11-210ENST00000489030 SIRT2Q8IXJ6 389 aa13.89□□□□□ -0.19
USP11-210ENST00000489030 FERMT2Q96AC1 680 aa13.89□□□□□ -0.19
USP11-210ENST00000489030 RLFQ13129 1914 aa13.89□□□□□ -0.19
USP11-210ENST00000489030 PRUNE2Q8WUY3 3088 aa13.89□□□□□ -0.19
USP11-210ENST00000489030 GLRX3O76003 335 aaKnown RBP13.88□□□□□ -0.19
USP11-210ENST00000489030 ERCC3P19447 782 aa13.88□□□□□ -0.19
USP11-210ENST00000489030 USP14P54578 494 aa13.88□□□□□ -0.19
USP11-210ENST00000489030 EPHB4P54760 987 aa13.88□□□□□ -0.19
USP11-210ENST00000489030 MYLIPQ8WY64 445 aa13.88□□□□□ -0.19
USP11-210ENST00000489030 DYNLL2Q96FJ2 89 aa13.88□□□□□ -0.19
USP11-210ENST00000489030 CCDC136Q96JN2 1154 aa13.88□□□□□ -0.19
USP11-210ENST00000489030 SEMA6BQ9H3T3 888 aa13.88□□□□□ -0.19
USP11-210ENST00000489030 PRDM5Q9NQX1 630 aaPredicted RBP13.88□□□□□ -0.19
USP11-210ENST00000489030 PDLIM7Q9NR12 457 aa13.88□□□□□ -0.19
USP11-210ENST00000489030 IVNS1ABPQ9Y6Y0 642 aa13.88□□□□□ -0.19
USP11-210ENST00000489030 ADCYAP1R1P41586 468 aa13.87□□□□□ -0.19
USP11-210ENST00000489030 SNX17Q15036 470 aa13.87□□□□□ -0.19
USP11-210ENST00000489030 HSP90AB4PQ58FF6 505 aa13.87□□□□□ -0.19
USP11-210ENST00000489030 FAM47AQ5JRC9 791 aa13.87□□□□□ -0.19
USP11-210ENST00000489030 ZNF697Q5TEC3 545 aa13.87□□□□□ -0.19
USP11-210ENST00000489030 DPP9Q86TI2 863 aa13.87□□□□□ -0.19
USP11-210ENST00000489030 TTC6Q86TZ1 520 aa13.87□□□□□ -0.19
USP11-210ENST00000489030 LENG1Q96BZ8 264 aaPredicted RBP13.87□□□□□ -0.19
USP11-210ENST00000489030 ATG4CQ96DT6 458 aa13.87□□□□□ -0.19
USP11-210ENST00000489030 SPATC1LQ9H0A9 340 aa13.87□□□□□ -0.19
USP11-210ENST00000489030 EXOC6BQ9Y2D4 811 aa13.87□□□□□ -0.19
USP11-210ENST00000489030 GTF3C3Q9Y5Q9 886 aa13.87□□□□□ -0.19
USP11-210ENST00000489030 MPHOSPH10O00566 681 aaKnown RBP13.86□□□□□ -0.19
USP11-210ENST00000489030 MSCO60682 206 aa13.86□□□□□ -0.19
USP11-210ENST00000489030 CHGBP05060 677 aa13.86□□□□□ -0.19
USP11-210ENST00000489030 POLR3DP05423 398 aaPredicted RBP13.86□□□□□ -0.19
USP11-210ENST00000489030 TAL1P17542 331 aaPredicted RBP13.86□□□□□ -0.19
USP11-210ENST00000489030 LRRC41Q15345 812 aa13.86□□□□□ -0.19
USP11-210ENST00000489030 OLFML2BQ68BL8 750 aa13.86□□□□□ -0.19
USP11-210ENST00000489030 SPICE1Q8N0Z3 855 aa13.86□□□□□ -0.19
USP11-210ENST00000489030 MAFAQ8NHW3 353 aaPredicted RBP13.86□□□□□ -0.19
USP11-210ENST00000489030 SDR42E1Q8WUS8 393 aa13.86□□□□□ -0.19
USP11-210ENST00000489030 TANGO6Q9C0B7 1094 aa13.86□□□□□ -0.19
USP11-210ENST00000489030 DCTPP1Q9H773 170 aa13.86□□□□□ -0.19
USP11-210ENST00000489030 CABP5Q9NP86 173 aa13.86□□□□□ -0.19
USP11-210ENST00000489030 A0A0G2JMZ2 1700 aa13.85□□□□□ -0.19
USP11-210ENST00000489030 MAGEB6P1A0A0J9YX57 407 aa13.85□□□□□ -0.19
USP11-210ENST00000489030 SEPT4O43236 478 aa13.85□□□□□ -0.19
USP11-210ENST00000489030 PRKAB2O43741 272 aa13.85□□□□□ -0.19
USP11-210ENST00000489030 IGHDP01880 384 aa13.85□□□□□ -0.19
USP11-210ENST00000489030 AKR1B1P15121 316 aa13.85□□□□□ -0.19
USP11-210ENST00000489030 PDE6AP16499 860 aa13.85□□□□□ -0.19
USP11-210ENST00000489030 DSG3P32926 999 aa13.85□□□□□ -0.19
USP11-210ENST00000489030 COG2Q14746 738 aa13.85□□□□□ -0.19
USP11-210ENST00000489030 SAMD1Q6SPF0 538 aaPredicted RBP13.85□□□□□ -0.19
USP11-210ENST00000489030 AACSQ86V21 672 aa13.85□□□□□ -0.19
USP11-210ENST00000489030 LCORLQ8N3X6 602 aa13.85□□□□□ -0.19
USP11-210ENST00000489030 IL1RAPL2Q9NP60 686 aa13.85□□□□□ -0.19
USP11-210ENST00000489030 MCM9Q9NXL9 1143 aa13.85□□□□□ -0.19
USP11-210ENST00000489030 ZNF236Q9UL36 1845 aa13.85□□□□□ -0.19
USP11-210ENST00000489030 SMCHD1A6NHR9 2005 aa13.85□□□□□ -0.19
USP11-210ENST00000489030 CDH23Q9H251 3354 aa13.84□□□□□ -0.19
USP11-210ENST00000489030 CYP2D7A0A087X1C5 515 aa13.84□□□□□ -0.19
USP11-210ENST00000489030 TCRBV5S4A2TA0A5A2 114 aa13.84□□□□□ -0.19
USP11-210ENST00000489030 KBTBD13C9JR72 458 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 104.5 ms