RNA–Protein interactions for RNA: ENST00000488767.1

PHF1-210, Transcript of PHD finger protein 1, humanhuman

TSL 3

Gene PHF1, Length 849 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-210ENST00000488767 A0A1W2PRG0 241 aa15.26■□□□□ 0.03
PHF1-210ENST00000488767 WDR46O15213 610 aaKnown RBP15.26■□□□□ 0.03
PHF1-210ENST00000488767 FOXP2O15409 715 aa15.26■□□□□ 0.03
PHF1-210ENST00000488767 TTLL1O95922 423 aa15.26■□□□□ 0.03
PHF1-210ENST00000488767 CHMLP26374 656 aa15.26■□□□□ 0.03
PHF1-210ENST00000488767 BMP2KLQ5H9B9 411 aa15.26■□□□□ 0.03
PHF1-210ENST00000488767 RRP12Q5JTH9 1297 aaKnown RBP15.26■□□□□ 0.03
PHF1-210ENST00000488767 CATSPERGQ6ZRH7 1159 aa15.26■□□□□ 0.03
PHF1-210ENST00000488767 MFSD6Q6ZSS7 791 aa15.26■□□□□ 0.03
PHF1-210ENST00000488767 KIAA1211Q6ZU35 1233 aa15.26■□□□□ 0.03
PHF1-210ENST00000488767 GPRC5AQ8NFJ5 357 aa15.26■□□□□ 0.03
PHF1-210ENST00000488767 NEDD1Q8NHV4 660 aa15.26■□□□□ 0.03
PHF1-210ENST00000488767 COA7Q96BR5 231 aa15.26■□□□□ 0.03
PHF1-210ENST00000488767 P2RX7Q99572 595 aaKnown RBP15.26■□□□□ 0.03
PHF1-210ENST00000488767 HOXC10Q9NYD6 342 aa15.26■□□□□ 0.03
PHF1-210ENST00000488767 CLIP2Q9UDT6 1046 aa15.26■□□□□ 0.03
PHF1-210ENST00000488767 SYNPO2Q9UMS6 1093 aa15.26■□□□□ 0.03
PHF1-210ENST00000488767 PLIN4Q96Q06 1357 aa15.25■□□□□ 0.03
PHF1-210ENST00000488767 CCDC85CA6NKD9 419 aa15.25■□□□□ 0.03
PHF1-210ENST00000488767 TNPO2O14787 897 aaKnown RBP15.25■□□□□ 0.03
PHF1-210ENST00000488767 ORC4O43929 436 aa15.25■□□□□ 0.03
PHF1-210ENST00000488767 ECM2O94769 699 aaPredicted RBP15.25■□□□□ 0.03
PHF1-210ENST00000488767 HAND2P61296 217 aa15.25■□□□□ 0.03
PHF1-210ENST00000488767 CCNA1P78396 465 aa15.25■□□□□ 0.03
PHF1-210ENST00000488767 COG2Q14746 738 aa15.25■□□□□ 0.03
PHF1-210ENST00000488767 FAM47AQ5JRC9 791 aa15.25■□□□□ 0.03
PHF1-210ENST00000488767 IFFO2Q5TF58 517 aa15.25■□□□□ 0.03
PHF1-210ENST00000488767 CLEC10AQ8IUN9 316 aa15.25■□□□□ 0.03
PHF1-210ENST00000488767 SPICE1Q8N0Z3 855 aa15.25■□□□□ 0.03
PHF1-210ENST00000488767 CEP95Q96GE4 821 aa15.25■□□□□ 0.03
PHF1-210ENST00000488767 MTMR4Q9NYA4 1195 aa15.25■□□□□ 0.03
PHF1-210ENST00000488767 PTPN22Q9Y2R2 807 aa15.25■□□□□ 0.03
PHF1-210ENST00000488767 CAPN15O75808 1086 aa15.24■□□□□ 0.03
PHF1-210ENST00000488767 FLOT1O75955 427 aa15.24■□□□□ 0.03
PHF1-210ENST00000488767 AKNAD1Q5T1N1 836 aa15.24■□□□□ 0.03
PHF1-210ENST00000488767 NBPF11Q86T75 865 aa15.24■□□□□ 0.03
PHF1-210ENST00000488767 RAET1EQ8TD07 263 aa15.24■□□□□ 0.03
PHF1-210ENST00000488767 ESR2Q92731 530 aa15.24■□□□□ 0.03
PHF1-210ENST00000488767 PAGR1Q9BTK6 254 aa15.24■□□□□ 0.03
PHF1-210ENST00000488767 MORF4L1Q9UBU8 362 aa15.24■□□□□ 0.03
PHF1-210ENST00000488767 STX8Q9UNK0 236 aa15.24■□□□□ 0.03
PHF1-210ENST00000488767 HPS5Q9UPZ3 1129 aa15.24■□□□□ 0.03
PHF1-210ENST00000488767 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.24■□□□□ 0.03
PHF1-210ENST00000488767 MB21D1Q8N884 522 aa15.23■□□□□ 0.03
PHF1-210ENST00000488767 STAG1Q8WVM7 1258 aa15.23■□□□□ 0.03
PHF1-210ENST00000488767 TRIM47Q96LD4 638 aa15.23■□□□□ 0.03
PHF1-210ENST00000488767 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.23■□□□□ 0.03
PHF1-210ENST00000488767 ARHGAP39Q9C0H5 1083 aa15.23■□□□□ 0.03
PHF1-210ENST00000488767 CNNM2Q9H8M5 875 aa15.23■□□□□ 0.03
PHF1-210ENST00000488767 ISY1Q9ULR0 285 aaKnown RBP15.23■□□□□ 0.03
PHF1-210ENST00000488767 RABGAP1Q9Y3P9 1069 aa15.23■□□□□ 0.03
PHF1-210ENST00000488767 U3KPZ7 1027 aaPredicted RBP15.23■□□□□ 0.03
PHF1-210ENST00000488767 MYPNQ86TC9 1320 aa15.22■□□□□ 0.03
PHF1-210ENST00000488767 IGKV6D-41A0A0C4DH26 115 aa15.22■□□□□ 0.03
PHF1-210ENST00000488767 F5H6K3 240 aa15.22■□□□□ 0.03
PHF1-210ENST00000488767 SGSM2O43147 1006 aa15.22■□□□□ 0.03
PHF1-210ENST00000488767 FGRP09769 529 aa15.22■□□□□ 0.03
PHF1-210ENST00000488767 MAPK4P31152 587 aa15.22■□□□□ 0.03
PHF1-210ENST00000488767 ERVK-9P63128 1117 aa15.22■□□□□ 0.03
PHF1-210ENST00000488767 ERVK-24P63145 666 aa15.22■□□□□ 0.03
PHF1-210ENST00000488767 KLRC3Q07444 240 aa15.22■□□□□ 0.03
PHF1-210ENST00000488767 TRDNQ13061 729 aa15.22■□□□□ 0.03
PHF1-210ENST00000488767 SLC9C1Q4G0N8 1177 aa15.22■□□□□ 0.03
PHF1-210ENST00000488767 SAMD1Q6SPF0 538 aaPredicted RBP15.22■□□□□ 0.03
PHF1-210ENST00000488767 IQCA1Q86XH1 822 aa15.22■□□□□ 0.03
PHF1-210ENST00000488767 SIAH1Q8IUQ4 282 aa15.22■□□□□ 0.03
PHF1-210ENST00000488767 MKL1Q969V6 931 aa15.22■□□□□ 0.03
PHF1-210ENST00000488767 SRRDQ9UH36 339 aa15.22■□□□□ 0.03
PHF1-210ENST00000488767 CTDP1Q9Y5B0 961 aaPredicted RBP15.22■□□□□ 0.03
PHF1-210ENST00000488767 CCDC178Q5BJE1 867 aa15.21■□□□□ 0.03
PHF1-210ENST00000488767 LBX2Q6XYB7 198 aa15.21■□□□□ 0.03
PHF1-210ENST00000488767 LRRC47Q8N1G4 583 aaKnown RBP15.21■□□□□ 0.03
PHF1-210ENST00000488767 GMCL1P1Q8NEA9 526 aa15.21■□□□□ 0.03
PHF1-210ENST00000488767 KRT23Q9C075 422 aa15.21■□□□□ 0.03
PHF1-210ENST00000488767 SPDYE16A6NNV3 312 aaPredicted RBP15.2■□□□□ 0.02
PHF1-210ENST00000488767 NDUFB10O96000 172 aa15.2■□□□□ 0.02
PHF1-210ENST00000488767 IKQ13123 557 aaPredicted RBP15.2■□□□□ 0.02
PHF1-210ENST00000488767 FAM83BQ5T0W9 1011 aa15.2■□□□□ 0.02
PHF1-210ENST00000488767 WDR78Q5VTH9 848 aa15.2■□□□□ 0.02
PHF1-210ENST00000488767 RBPJLQ9UBG7 517 aa15.2■□□□□ 0.02
PHF1-210ENST00000488767 PTCH2Q9Y6C5 1203 aa15.2■□□□□ 0.02
PHF1-210ENST00000488767 IVNS1ABPQ9Y6Y0 642 aa15.2■□□□□ 0.02
PHF1-210ENST00000488767 CDC45O75419 566 aa15.19■□□□□ 0.02
PHF1-210ENST00000488767 DSG3P32926 999 aa15.19■□□□□ 0.02
PHF1-210ENST00000488767 SLC1A4P43007 532 aa15.19■□□□□ 0.02
PHF1-210ENST00000488767 PRKCZQ05513 592 aa15.19■□□□□ 0.02
PHF1-210ENST00000488767 SLFN13Q68D06 897 aa15.19■□□□□ 0.02
PHF1-210ENST00000488767 TBC1D10CQ8IV04 446 aa15.19■□□□□ 0.02
PHF1-210ENST00000488767 SOCS4Q8WXH5 440 aa15.19■□□□□ 0.02
PHF1-210ENST00000488767 SLF1Q9BQI6 1058 aa15.19■□□□□ 0.02
PHF1-210ENST00000488767 TXNRD2Q9NNW7 524 aa15.19■□□□□ 0.02
PHF1-210ENST00000488767 INCENPQ9NQS7 918 aa15.19■□□□□ 0.02
PHF1-210ENST00000488767 TCP11L1Q9NUJ3 509 aa15.19■□□□□ 0.02
PHF1-210ENST00000488767 BIN2Q9UBW5 565 aaPredicted RBP15.19■□□□□ 0.02
PHF1-210ENST00000488767 FEM1BQ9UK73 627 aa15.19■□□□□ 0.02
PHF1-210ENST00000488767 GREB1LQ9C091 1923 aaPredicted RBP15.19■□□□□ 0.02
PHF1-210ENST00000488767 TOP1P11387 765 aaKnown RBP15.18■□□□□ 0.02
PHF1-210ENST00000488767 BMP3P12645 472 aa15.18■□□□□ 0.02
PHF1-210ENST00000488767 PLS1Q14651 629 aa15.18■□□□□ 0.02
PHF1-210ENST00000488767 KIAA1755Q5JYT7 1200 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms