RNA–Protein interactions for RNA: ENST00000488627.5

CTDSP1-209, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 1,118 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-209ENST00000488627 ZNF333Q96JL9 665 aa18.99■□□□□ 0.63
CTDSP1-209ENST00000488627 NYAP2Q9P242 653 aa18.99■□□□□ 0.63
CTDSP1-209ENST00000488627 MYPNQ86TC9 1320 aa18.99■□□□□ 0.63
CTDSP1-209ENST00000488627 ZSWIM8A7E2V4 1837 aa18.98■□□□□ 0.63
CTDSP1-209ENST00000488627 SPDYE16A6NNV3 312 aaPredicted RBP18.98■□□□□ 0.63
CTDSP1-209ENST00000488627 TNPO2O14787 897 aaKnown RBP18.98■□□□□ 0.63
CTDSP1-209ENST00000488627 FLT3LGP49771 235 aa18.98■□□□□ 0.63
CTDSP1-209ENST00000488627 CTDSPL2Q05D32 466 aa18.98■□□□□ 0.63
CTDSP1-209ENST00000488627 PDE4BQ07343 736 aa18.98■□□□□ 0.63
CTDSP1-209ENST00000488627 CWC27Q6UX04 472 aaKnown RBP18.98■□□□□ 0.63
CTDSP1-209ENST00000488627 SPICE1Q8N0Z3 855 aa18.98■□□□□ 0.63
CTDSP1-209ENST00000488627 NEDD1Q8NHV4 660 aa18.98■□□□□ 0.63
CTDSP1-209ENST00000488627 SH2D4AQ9H788 454 aa18.98■□□□□ 0.63
CTDSP1-209ENST00000488627 GJD2Q9UKL4 321 aa18.98■□□□□ 0.63
CTDSP1-209ENST00000488627 RABGAP1Q9Y3P9 1069 aa18.98■□□□□ 0.63
CTDSP1-209ENST00000488627 HIP1O00291 1037 aa18.97■□□□□ 0.63
CTDSP1-209ENST00000488627 SLC3A2P08195 630 aaKnown RBP18.97■□□□□ 0.63
CTDSP1-209ENST00000488627 ERVK-9P63128 1117 aa18.97■□□□□ 0.63
CTDSP1-209ENST00000488627 ERVK-24P63145 666 aa18.97■□□□□ 0.63
CTDSP1-209ENST00000488627 ATP2B2Q01814 1243 aa18.97■□□□□ 0.63
CTDSP1-209ENST00000488627 COG2Q14746 738 aa18.97■□□□□ 0.63
CTDSP1-209ENST00000488627 SLC9C1Q4G0N8 1177 aa18.97■□□□□ 0.63
CTDSP1-209ENST00000488627 SH3TC2Q8TF17 1288 aa18.97■□□□□ 0.63
CTDSP1-209ENST00000488627 CEP95Q96GE4 821 aa18.97■□□□□ 0.63
CTDSP1-209ENST00000488627 DIAPH3Q9NSV4 1193 aa18.97■□□□□ 0.63
CTDSP1-209ENST00000488627 MTMR4Q9NYA4 1195 aa18.97■□□□□ 0.63
CTDSP1-209ENST00000488627 ZMYM6O95789 1325 aa18.97■□□□□ 0.63
CTDSP1-209ENST00000488627 CENPFP49454 3210 aa18.96■□□□□ 0.63
CTDSP1-209ENST00000488627 TFAP4Q01664 338 aa18.96■□□□□ 0.63
CTDSP1-209ENST00000488627 IRF5Q13568 498 aa18.96■□□□□ 0.63
CTDSP1-209ENST00000488627 FAM47AQ5JRC9 791 aa18.96■□□□□ 0.63
CTDSP1-209ENST00000488627 RAET1EQ8TD07 263 aa18.96■□□□□ 0.63
CTDSP1-209ENST00000488627 MKL1Q969V6 931 aa18.96■□□□□ 0.63
CTDSP1-209ENST00000488627 COA7Q96BR5 231 aa18.96■□□□□ 0.63
CTDSP1-209ENST00000488627 PAGR1Q9BTK6 254 aa18.96■□□□□ 0.63
CTDSP1-209ENST00000488627 PORCNQ9H237 461 aa18.96■□□□□ 0.63
CTDSP1-209ENST00000488627 IL25Q9H293 177 aa18.96■□□□□ 0.63
CTDSP1-209ENST00000488627 HOXC10Q9NYD6 342 aa18.96■□□□□ 0.63
CTDSP1-209ENST00000488627 BTBD7Q9P203 1132 aa18.96■□□□□ 0.63
CTDSP1-209ENST00000488627 PLIN4Q96Q06 1357 aa18.95■□□□□ 0.62
CTDSP1-209ENST00000488627 WDR46O15213 610 aaKnown RBP18.95■□□□□ 0.62
CTDSP1-209ENST00000488627 NBPF11Q86T75 865 aa18.95■□□□□ 0.62
CTDSP1-209ENST00000488627 NBPF3Q9H094 633 aa18.95■□□□□ 0.62
CTDSP1-209ENST00000488627 CLIP2Q9UDT6 1046 aa18.95■□□□□ 0.62
CTDSP1-209ENST00000488627 ORC4O43929 436 aa18.94■□□□□ 0.62
CTDSP1-209ENST00000488627 TSPY3P0CV98 308 aa18.94■□□□□ 0.62
CTDSP1-209ENST00000488627 TSPY8P0CW00 308 aa18.94■□□□□ 0.62
CTDSP1-209ENST00000488627 GRK4P32298 578 aa18.94■□□□□ 0.62
CTDSP1-209ENST00000488627 DSG3P32926 999 aa18.94■□□□□ 0.62
CTDSP1-209ENST00000488627 MFAP1P55081 439 aaKnown RBP18.94■□□□□ 0.62
CTDSP1-209ENST00000488627 TANGO6Q9C0B7 1094 aa18.94■□□□□ 0.62
CTDSP1-209ENST00000488627 GOPCQ9HD26 462 aa18.94■□□□□ 0.62
CTDSP1-209ENST00000488627 IL17RBQ9NRM6 502 aa18.94■□□□□ 0.62
CTDSP1-209ENST00000488627 POTEFA5A3E0 1075 aa18.93■□□□□ 0.62
CTDSP1-209ENST00000488627 F5H6K3 240 aa18.93■□□□□ 0.62
CTDSP1-209ENST00000488627 TTLL1O95922 423 aa18.93■□□□□ 0.62
CTDSP1-209ENST00000488627 MAPK4P31152 587 aa18.93■□□□□ 0.62
CTDSP1-209ENST00000488627 KLRC3Q07444 240 aa18.93■□□□□ 0.62
CTDSP1-209ENST00000488627 CENPQQ7L2Z9 268 aaPredicted RBP18.93■□□□□ 0.62
CTDSP1-209ENST00000488627 PXYLP1Q8TE99 480 aa18.93■□□□□ 0.62
CTDSP1-209ENST00000488627 FBXO28Q9NVF7 368 aa18.93■□□□□ 0.62
CTDSP1-209ENST00000488627 SYNPO2Q9UMS6 1093 aa18.93■□□□□ 0.62
CTDSP1-209ENST00000488627 ADAMTS5Q9UNA0 930 aa18.93■□□□□ 0.62
CTDSP1-209ENST00000488627 ADCY3O60266 1144 aa18.92■□□□□ 0.62
CTDSP1-209ENST00000488627 FLOT1O75955 427 aa18.92■□□□□ 0.62
CTDSP1-209ENST00000488627 NDUFB10O96000 172 aa18.92■□□□□ 0.62
CTDSP1-209ENST00000488627 CHMLP26374 656 aa18.92■□□□□ 0.62
CTDSP1-209ENST00000488627 NOVP48745 357 aa18.92■□□□□ 0.62
CTDSP1-209ENST00000488627 HAND2P61296 217 aa18.92■□□□□ 0.62
CTDSP1-209ENST00000488627 FAM83BQ5T0W9 1011 aa18.92■□□□□ 0.62
CTDSP1-209ENST00000488627 GPR142Q7Z601 462 aa18.92■□□□□ 0.62
CTDSP1-209ENST00000488627 SLAIN1Q8ND83 568 aa18.92■□□□□ 0.62
CTDSP1-209ENST00000488627 NKX2-3Q8TAU0 364 aa18.92■□□□□ 0.62
CTDSP1-209ENST00000488627 USP6NLQ92738 828 aa18.92■□□□□ 0.62
CTDSP1-209ENST00000488627 ATG4CQ96DT6 458 aa18.92■□□□□ 0.62
CTDSP1-209ENST00000488627 DSCC1Q9BVC3 393 aa18.92■□□□□ 0.62
CTDSP1-209ENST00000488627 GREB1LQ9C091 1923 aaPredicted RBP18.92■□□□□ 0.62
CTDSP1-209ENST00000488627 NMT2O60551 498 aa18.91■□□□□ 0.62
CTDSP1-209ENST00000488627 ELNP15502 786 aa18.91■□□□□ 0.62
CTDSP1-209ENST00000488627 MTFR1Q15390 333 aa18.91■□□□□ 0.62
CTDSP1-209ENST00000488627 MORN1Q5T089 497 aa18.91■□□□□ 0.62
CTDSP1-209ENST00000488627 SKAP1Q86WV1 359 aa18.91■□□□□ 0.62
CTDSP1-209ENST00000488627 TBC1D10CQ8IV04 446 aa18.91■□□□□ 0.62
CTDSP1-209ENST00000488627 NUP88Q99567 741 aaPredicted RBP18.91■□□□□ 0.62
CTDSP1-209ENST00000488627 TSPY2A6NKD2 308 aa18.9■□□□□ 0.62
CTDSP1-209ENST00000488627 RANBP6O60518 1105 aaKnown RBP18.9■□□□□ 0.62
CTDSP1-209ENST00000488627 MYCP01106 439 aaPredicted RBP18.9■□□□□ 0.62
CTDSP1-209ENST00000488627 CCNA1P78396 465 aa18.9■□□□□ 0.62
CTDSP1-209ENST00000488627 PLEKHH3Q7Z736 793 aa18.9■□□□□ 0.62
CTDSP1-209ENST00000488627 LRRC47Q8N1G4 583 aaKnown RBP18.9■□□□□ 0.62
CTDSP1-209ENST00000488627 MB21D1Q8N884 522 aa18.9■□□□□ 0.62
CTDSP1-209ENST00000488627 GMCL1P1Q8NEA9 526 aa18.9■□□□□ 0.62
CTDSP1-209ENST00000488627 STAG1Q8WVM7 1258 aa18.9■□□□□ 0.62
CTDSP1-209ENST00000488627 MOV10L1Q9BXT6 1211 aaKnown RBP18.9■□□□□ 0.62
CTDSP1-209ENST00000488627 AKNAD1Q5T1N1 836 aa18.89■□□□□ 0.61
CTDSP1-209ENST00000488627 NUDT12Q9BQG2 462 aa18.89■□□□□ 0.61
CTDSP1-209ENST00000488627 SPATC1LQ9H0A9 340 aa18.89■□□□□ 0.61
CTDSP1-209ENST00000488627 TCP11L1Q9NUJ3 509 aa18.89■□□□□ 0.61
CTDSP1-209ENST00000488627 PPP1R9AQ9ULJ8 1098 aa18.89■□□□□ 0.61
CTDSP1-209ENST00000488627 BRCA2P51587 3418 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms