RNA–Protein interactions for RNA: ENST00000488623.5

CTNS-206, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3

Gene CTNS, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-206ENST00000488623 MYH4Q9Y623 1939 aa17.66■□□□□ 0.42
CTNS-206ENST00000488623 ITGBL1O95965 494 aaPredicted RBP17.66■□□□□ 0.42
CTNS-206ENST00000488623 DDIT3P35638 169 aa17.66■□□□□ 0.42
CTNS-206ENST00000488623 ATP2B2Q01814 1243 aa17.66■□□□□ 0.42
CTNS-206ENST00000488623 RTN1Q16799 776 aa17.66■□□□□ 0.42
CTNS-206ENST00000488623 CHMP4CQ96CF2 233 aa17.66■□□□□ 0.42
CTNS-206ENST00000488623 LLPHQ9BRT6 129 aaKnown RBP17.66■□□□□ 0.42
CTNS-206ENST00000488623 CREBZFQ9NS37 354 aa17.66■□□□□ 0.42
CTNS-206ENST00000488623 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.66■□□□□ 0.42
CTNS-206ENST00000488623 JAK2O60674 1132 aa17.65■□□□□ 0.42
CTNS-206ENST00000488623 ICA1Q05084 483 aa17.65■□□□□ 0.42
CTNS-206ENST00000488623 PRKG1Q13976 671 aa17.65■□□□□ 0.42
CTNS-206ENST00000488623 NTRK3Q16288 839 aa17.65■□□□□ 0.42
CTNS-206ENST00000488623 LRRC47Q8N1G4 583 aaKnown RBP17.65■□□□□ 0.42
CTNS-206ENST00000488623 NSUN7Q8NE18 718 aaKnown RBP17.65■□□□□ 0.42
CTNS-206ENST00000488623 SMARCC2Q8TAQ2 1214 aa17.65■□□□□ 0.42
CTNS-206ENST00000488623 MAP3K14Q99558 947 aa17.65■□□□□ 0.42
CTNS-206ENST00000488623 CWC22Q9HCG8 908 aaKnown RBP17.65■□□□□ 0.42
CTNS-206ENST00000488623 GINM1Q9NU53 330 aa17.65■□□□□ 0.42
CTNS-206ENST00000488623 SMC3Q9UQE7 1217 aa17.65■□□□□ 0.42
CTNS-206ENST00000488623 ATAD5Q96QE3 1844 aa17.65■□□□□ 0.42
CTNS-206ENST00000488623 A0A1W2PRG0 241 aa17.64■□□□□ 0.41
CTNS-206ENST00000488623 DHX16O60231 1041 aaKnown RBP17.64■□□□□ 0.41
CTNS-206ENST00000488623 ASNSP08243 561 aa17.64■□□□□ 0.41
CTNS-206ENST00000488623 GRM4Q14833 912 aa17.64■□□□□ 0.41
CTNS-206ENST00000488623 PPP2R5BQ15173 497 aa17.64■□□□□ 0.41
CTNS-206ENST00000488623 ACER1Q8TDN7 264 aa17.64■□□□□ 0.41
CTNS-206ENST00000488623 ZKSCAN4Q969J2 545 aaPredicted RBP17.64■□□□□ 0.41
CTNS-206ENST00000488623 WRNIP1Q96S55 665 aa17.64■□□□□ 0.41
CTNS-206ENST00000488623 MTMR7Q9Y216 660 aa17.64■□□□□ 0.41
CTNS-206ENST00000488623 USP17L5A8MUK1 530 aa17.63■□□□□ 0.41
CTNS-206ENST00000488623 CPLX1O14810 134 aa17.63■□□□□ 0.41
CTNS-206ENST00000488623 PPFIA3O75145 1194 aa17.63■□□□□ 0.41
CTNS-206ENST00000488623 GJB2P29033 226 aa17.63■□□□□ 0.41
CTNS-206ENST00000488623 FMR1Q06787 632 aaKnown RBP eCLIP17.63■□□□□ 0.41
CTNS-206ENST00000488623 RASGRP2Q7LDG7 609 aa17.63■□□□□ 0.41
CTNS-206ENST00000488623 CCDC84Q86UT8 332 aaPredicted RBP17.63■□□□□ 0.41
CTNS-206ENST00000488623 SCYL3Q8IZE3 742 aa17.63■□□□□ 0.41
CTNS-206ENST00000488623 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.63■□□□□ 0.41
CTNS-206ENST00000488623 RBM28Q9NW13 759 aaKnown RBP17.63■□□□□ 0.41
CTNS-206ENST00000488623 MAD2L2Q9UI95 211 aa17.63■□□□□ 0.41
CTNS-206ENST00000488623 CCDC196A0A1B0GTZ2 297 aa17.62■□□□□ 0.41
CTNS-206ENST00000488623 PTPDC1A2A3K4 754 aa17.62■□□□□ 0.41
CTNS-206ENST00000488623 PALM3A6NDB9 673 aaPredicted RBP17.62■□□□□ 0.41
CTNS-206ENST00000488623 TRAF5O00463 557 aa17.62■□□□□ 0.41
CTNS-206ENST00000488623 FDPSP14324 419 aaKnown RBP17.62■□□□□ 0.41
CTNS-206ENST00000488623 NF2P35240 595 aa17.62■□□□□ 0.41
CTNS-206ENST00000488623 ECE1P42892 770 aa17.62■□□□□ 0.41
CTNS-206ENST00000488623 MAP3K9P80192 1104 aa17.62■□□□□ 0.41
CTNS-206ENST00000488623 NOL9Q5SY16 702 aaKnown RBP17.62■□□□□ 0.41
CTNS-206ENST00000488623 USP17L2Q6R6M4 530 aa17.62■□□□□ 0.41
CTNS-206ENST00000488623 CMTR1Q8N1G2 835 aaKnown RBP17.62■□□□□ 0.41
CTNS-206ENST00000488623 STAG2Q8N3U4 1231 aa17.62■□□□□ 0.41
CTNS-206ENST00000488623 CTCFLQ8NI51 663 aaPredicted RBP17.62■□□□□ 0.41
CTNS-206ENST00000488623 DDX11Q96FC9 970 aa17.62■□□□□ 0.41
CTNS-206ENST00000488623 ARHGEF10LQ9HCE6 1279 aa17.62■□□□□ 0.41
CTNS-206ENST00000488623 TMEM88BA6NKF7 163 aa17.61■□□□□ 0.41
CTNS-206ENST00000488623 PPP1R12BO60237 982 aaPredicted RBP17.61■□□□□ 0.41
CTNS-206ENST00000488623 PLEKHA8P1O95397 391 aa17.61■□□□□ 0.41
CTNS-206ENST00000488623 SNHG28P0DPA3 235 aa17.61■□□□□ 0.41
CTNS-206ENST00000488623 PDHBP11177 359 aa17.61■□□□□ 0.41
CTNS-206ENST00000488623 IFNAR1P17181 557 aa17.61■□□□□ 0.41
CTNS-206ENST00000488623 KIF5BP33176 963 aa17.61■□□□□ 0.41
CTNS-206ENST00000488623 FUT2Q10981 343 aa17.61■□□□□ 0.41
CTNS-206ENST00000488623 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.61■□□□□ 0.41
CTNS-206ENST00000488623 TMTC3Q6ZXV5 915 aa17.61■□□□□ 0.41
CTNS-206ENST00000488623 MOB2Q70IA6 237 aa17.61■□□□□ 0.41
CTNS-206ENST00000488623 NBPF11Q86T75 865 aa17.61■□□□□ 0.41
CTNS-206ENST00000488623 SRBD1Q8N5C6 995 aaKnown RBP17.61■□□□□ 0.41
CTNS-206ENST00000488623 SYNPO2Q9UMS6 1093 aa17.61■□□□□ 0.41
CTNS-206ENST00000488623 TMX2Q9Y320 296 aa17.61■□□□□ 0.41
CTNS-206ENST00000488623 DOCK1Q14185 1865 aa17.61■□□□□ 0.41
CTNS-206ENST00000488623 F5H6K3 240 aa17.6■□□□□ 0.41
CTNS-206ENST00000488623 PARP1P09874 1014 aaKnown RBP17.6■□□□□ 0.41
CTNS-206ENST00000488623 GOLGA8HP0CJ92 632 aa17.6■□□□□ 0.41
CTNS-206ENST00000488623 PTPRAP18433 802 aa17.6■□□□□ 0.41
CTNS-206ENST00000488623 KLRC3Q07444 240 aa17.6■□□□□ 0.41
CTNS-206ENST00000488623 MAP3K11Q16584 847 aa17.6■□□□□ 0.41
CTNS-206ENST00000488623 KIAA1755Q5JYT7 1200 aa17.6■□□□□ 0.41
CTNS-206ENST00000488623 SLFN13Q68D06 897 aa17.6■□□□□ 0.41
CTNS-206ENST00000488623 CPLX2Q6PUV4 134 aaKnown RBP17.6■□□□□ 0.41
CTNS-206ENST00000488623 CCDC82Q8N4S0 544 aa17.6■□□□□ 0.41
CTNS-206ENST00000488623 GMCL1P1Q8NEA9 526 aa17.6■□□□□ 0.41
CTNS-206ENST00000488623 PHKBQ93100 1093 aa17.6■□□□□ 0.41
CTNS-206ENST00000488623 CDKL5O76039 1030 aa17.59■□□□□ 0.41
CTNS-206ENST00000488623 IREB2P48200 963 aaKnown RBP17.59■□□□□ 0.41
CTNS-206ENST00000488623 HMGN5P82970 282 aaKnown RBP17.59■□□□□ 0.41
CTNS-206ENST00000488623 SSRP1Q08945 709 aaKnown RBP17.59■□□□□ 0.41
CTNS-206ENST00000488623 SLC35G1Q2M3R5 365 aa17.59■□□□□ 0.41
CTNS-206ENST00000488623 WDR18Q9BV38 432 aa17.59■□□□□ 0.41
CTNS-206ENST00000488623 PICK1Q9NRD5 415 aa17.59■□□□□ 0.41
CTNS-206ENST00000488623 ORC3Q9UBD5 711 aaPredicted RBP17.59■□□□□ 0.41
CTNS-206ENST00000488623 FRMPD2Q68DX3 1309 aaPredicted RBP17.58■□□□□ 0.4
CTNS-206ENST00000488623 KLRF2D3W0D1 207 aa17.58■□□□□ 0.4
CTNS-206ENST00000488623 UBE2Q2LH0YL09 131 aa17.58■□□□□ 0.4
CTNS-206ENST00000488623 FMNL1O95466 1100 aaPredicted RBP17.58■□□□□ 0.4
CTNS-206ENST00000488623 NDUFB10O96000 172 aa17.58■□□□□ 0.4
CTNS-206ENST00000488623 GNAQP50148 359 aa17.58■□□□□ 0.4
CTNS-206ENST00000488623 ZNF543Q08ER8 600 aa17.58■□□□□ 0.4
CTNS-206ENST00000488623 VGLL4Q14135 290 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms