RNA–Protein interactions for RNA: ENST00000488426.5

NELFE-209, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 1,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-209ENST00000488426 CALM2P0DP24 149 aa14.8□□□□□ -0.04
NELFE-209ENST00000488426 CALM3P0DP25 149 aa14.8□□□□□ -0.04
NELFE-209ENST00000488426 FDPSP14324 419 aaKnown RBP14.8□□□□□ -0.04
NELFE-209ENST00000488426 MAP3K11Q16584 847 aa14.8□□□□□ -0.04
NELFE-209ENST00000488426 RTN1Q16799 776 aa14.8□□□□□ -0.04
NELFE-209ENST00000488426 CATIPQ7Z7H3 387 aa14.8□□□□□ -0.04
NELFE-209ENST00000488426 RAB11FIP4Q86YS3 637 aa14.8□□□□□ -0.04
NELFE-209ENST00000488426 DYNLL2Q96FJ2 89 aa14.8□□□□□ -0.04
NELFE-209ENST00000488426 FAM217BQ9NTX9 383 aaPredicted RBP14.8□□□□□ -0.04
NELFE-209ENST00000488426 TCP11L1Q9NUJ3 509 aa14.8□□□□□ -0.04
NELFE-209ENST00000488426 LMBRD1Q9NUN5 540 aa14.8□□□□□ -0.04
NELFE-209ENST00000488426 ORC3Q9UBD5 711 aaPredicted RBP14.8□□□□□ -0.04
NELFE-209ENST00000488426 PPP2R3BQ9Y5P8 575 aa14.8□□□□□ -0.04
NELFE-209ENST00000488426 TCHHQ07283 1943 aa14.79□□□□□ -0.04
NELFE-209ENST00000488426 DDAH1O94760 285 aa14.79□□□□□ -0.04
NELFE-209ENST00000488426 CDC27P30260 824 aa14.79□□□□□ -0.04
NELFE-209ENST00000488426 ADD1P35611 737 aaKnown RBP14.79□□□□□ -0.04
NELFE-209ENST00000488426 GJA5P36382 358 aa14.79□□□□□ -0.04
NELFE-209ENST00000488426 NTRK3Q16288 839 aa14.79□□□□□ -0.04
NELFE-209ENST00000488426 SLC4A8Q2Y0W8 1093 aa14.79□□□□□ -0.04
NELFE-209ENST00000488426 FAM47AQ5JRC9 791 aa14.79□□□□□ -0.04
NELFE-209ENST00000488426 ZNF444Q8N0Y2 327 aaPredicted RBP14.79□□□□□ -0.04
NELFE-209ENST00000488426 MYL10Q9BUA6 226 aa14.79□□□□□ -0.04
NELFE-209ENST00000488426 OSBPL5Q9H0X9 879 aaPredicted RBP14.79□□□□□ -0.04
NELFE-209ENST00000488426 R3HDMLQ9H3Y0 253 aa14.79□□□□□ -0.04
NELFE-209ENST00000488426 ZSCAN16Q9H4T2 348 aaPredicted RBP14.79□□□□□ -0.04
NELFE-209ENST00000488426 MYH8P13535 1937 aa14.79□□□□□ -0.04
NELFE-209ENST00000488426 IFNAR1P17181 557 aa14.78□□□□□ -0.04
NELFE-209ENST00000488426 RXRAP19793 462 aa14.78□□□□□ -0.04
NELFE-209ENST00000488426 RASA1P20936 1047 aa14.78□□□□□ -0.04
NELFE-209ENST00000488426 CDK8P49336 464 aa14.78□□□□□ -0.04
NELFE-209ENST00000488426 TFAP4Q01664 338 aa14.78□□□□□ -0.04
NELFE-209ENST00000488426 NFIAQ12857 509 aa14.78□□□□□ -0.04
NELFE-209ENST00000488426 PICALMQ13492 652 aa14.78□□□□□ -0.04
NELFE-209ENST00000488426 SUPT20HL1Q3ZLR7 823 aa14.78□□□□□ -0.04
NELFE-209ENST00000488426 SPRYD7Q5W111 196 aa14.78□□□□□ -0.04
NELFE-209ENST00000488426 DGKHQ86XP1 1220 aa14.78□□□□□ -0.04
NELFE-209ENST00000488426 FANCBQ8NB91 859 aa14.78□□□□□ -0.04
NELFE-209ENST00000488426 TMEM87AQ8NBN3 555 aa14.78□□□□□ -0.04
NELFE-209ENST00000488426 CNKSR2Q8WXI2 1034 aa14.78□□□□□ -0.04
NELFE-209ENST00000488426 ANKS1AQ92625 1134 aa14.78□□□□□ -0.04
NELFE-209ENST00000488426 IDI2Q9BXS1 227 aa14.78□□□□□ -0.04
NELFE-209ENST00000488426 DDX4Q9NQI0 724 aaKnown RBP14.78□□□□□ -0.04
NELFE-209ENST00000488426 TAOK2Q9UL54 1235 aa14.78□□□□□ -0.04
NELFE-209ENST00000488426 MYH15Q9Y2K3 1946 aa14.78□□□□□ -0.04
NELFE-209ENST00000488426 PPP1R12BO60237 982 aaPredicted RBP14.78□□□□□ -0.04
NELFE-209ENST00000488426 CSPP1Q1MSJ5 1256 aa14.78□□□□□ -0.04
NELFE-209ENST00000488426 ZFPM1Q8IX07 1006 aa14.78□□□□□ -0.04
NELFE-209ENST00000488426 SLC10A4Q96EP9 437 aa14.78□□□□□ -0.04
NELFE-209ENST00000488426 RBM28Q9NW13 759 aaKnown RBP14.78□□□□□ -0.04
NELFE-209ENST00000488426 CA12O43570 354 aa14.77□□□□□ -0.05
NELFE-209ENST00000488426 TBC1D8O95759 1140 aa14.77□□□□□ -0.05
NELFE-209ENST00000488426 TSPY3P0CV98 308 aa14.77□□□□□ -0.05
NELFE-209ENST00000488426 TSPY8P0CW00 308 aa14.77□□□□□ -0.05
NELFE-209ENST00000488426 GABPAQ06546 454 aa14.77□□□□□ -0.05
NELFE-209ENST00000488426 RESTQ13127 1097 aa14.77□□□□□ -0.05
NELFE-209ENST00000488426 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.77□□□□□ -0.05
NELFE-209ENST00000488426 CCDC144CPQ8IYA2 1237 aa14.77□□□□□ -0.05
NELFE-209ENST00000488426 SLC44A5Q8NCS7 719 aa14.77□□□□□ -0.05
NELFE-209ENST00000488426 SWAP70Q9UH65 585 aa14.77□□□□□ -0.05
NELFE-209ENST00000488426 PLIN4Q96Q06 1357 aa14.77□□□□□ -0.05
NELFE-209ENST00000488426 CENPFP49454 3210 aa14.77□□□□□ -0.05
NELFE-209ENST00000488426 COL2A1P02458 1487 aaPredicted RBP14.77□□□□□ -0.05
NELFE-209ENST00000488426 PRPF40AO75400 957 aaKnown RBP14.76□□□□□ -0.05
NELFE-209ENST00000488426 FMNL1O95466 1100 aaPredicted RBP14.76□□□□□ -0.05
NELFE-209ENST00000488426 HLA-DOAP06340 250 aa14.76□□□□□ -0.05
NELFE-209ENST00000488426 SLURP2P0DP57 97 aa14.76□□□□□ -0.05
NELFE-209ENST00000488426 TM4SF4P48230 202 aa14.76□□□□□ -0.05
NELFE-209ENST00000488426 SSRP1Q08945 709 aaKnown RBP14.76□□□□□ -0.05
NELFE-209ENST00000488426 TCP10Q12799 353 aa14.76□□□□□ -0.05
NELFE-209ENST00000488426 TROAPQ12815 778 aa14.76□□□□□ -0.05
NELFE-209ENST00000488426 TNFAIP1Q13829 316 aa14.76□□□□□ -0.05
NELFE-209ENST00000488426 KLHL40Q2TBA0 621 aa14.76□□□□□ -0.05
NELFE-209ENST00000488426 RCSD1Q6JBY9 416 aa14.76□□□□□ -0.05
NELFE-209ENST00000488426 NUP133Q8WUM0 1156 aa14.76□□□□□ -0.05
NELFE-209ENST00000488426 CHAMP1Q96JM3 812 aa14.76□□□□□ -0.05
NELFE-209ENST00000488426 C8orf76Q96K31 380 aa14.76□□□□□ -0.05
NELFE-209ENST00000488426 EHD4Q9H223 541 aa14.76□□□□□ -0.05
NELFE-209ENST00000488426 DHX36Q9H2U1 1008 aaKnown RBP14.76□□□□□ -0.05
NELFE-209ENST00000488426 NMT2O60551 498 aa14.76□□□□□ -0.05
NELFE-209ENST00000488426 MIGA2Q7L4E1 593 aa14.76□□□□□ -0.05
NELFE-209ENST00000488426 FERMT3Q86UX7 667 aa14.76□□□□□ -0.05
NELFE-209ENST00000488426 TRIM22Q8IYM9 498 aa14.76□□□□□ -0.05
NELFE-209ENST00000488426 FBXO18Q8NFZ0 1043 aa14.76□□□□□ -0.05
NELFE-209ENST00000488426 NEDD1Q8NHV4 660 aa14.76□□□□□ -0.05
NELFE-209ENST00000488426 WASF1Q92558 559 aa14.76□□□□□ -0.05
NELFE-209ENST00000488426 MAP3K14Q99558 947 aa14.76□□□□□ -0.05
NELFE-209ENST00000488426 ELP3Q9H9T3 547 aa14.76□□□□□ -0.05
NELFE-209ENST00000488426 IL17RBQ9NRM6 502 aa14.76□□□□□ -0.05
NELFE-209ENST00000488426 FAM198AQ9UFP1 575 aa14.76□□□□□ -0.05
NELFE-209ENST00000488426 SERPINB13Q9UIV8 391 aa14.76□□□□□ -0.05
NELFE-209ENST00000488426 MYH6P13533 1939 aa14.75□□□□□ -0.05
NELFE-209ENST00000488426 KRT85P78386 507 aa14.75□□□□□ -0.05
NELFE-209ENST00000488426 FOXD4L6Q3SYB3 417 aaPredicted RBP14.75□□□□□ -0.05
NELFE-209ENST00000488426 FOXD4L3Q6VB84 417 aaPredicted RBP14.75□□□□□ -0.05
NELFE-209ENST00000488426 WNK4Q96J92 1243 aa14.75□□□□□ -0.05
NELFE-209ENST00000488426 KAT14Q9H8E8 782 aa14.75□□□□□ -0.05
NELFE-209ENST00000488426 CNPY2Q9Y2B0 182 aa14.75□□□□□ -0.05
NELFE-209ENST00000488426 DDX49Q9Y6V7 483 aaKnown RBP14.75□□□□□ -0.05
NELFE-209ENST00000488426 PPFIA3O75145 1194 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms