RNA–Protein interactions for RNA: ENST00000488391.5

LCN2-206, Transcript of lipocalin 2, humanhuman

TSL 2

Gene LCN2, Length 485 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN2-206ENST00000488391 TTC28Q96AY4 2481 aa13.25□□□□□ -0.29
LCN2-206ENST00000488391 MYO5AQ9Y4I1 1855 aaKnown RBP13.25□□□□□ -0.29
LCN2-206ENST00000488391 TRIM43BA6NCK2 446 aa13.25□□□□□ -0.29
LCN2-206ENST00000488391 CYBAP13498 195 aa13.25□□□□□ -0.29
LCN2-206ENST00000488391 FOSL2P15408 326 aa13.25□□□□□ -0.29
LCN2-206ENST00000488391 VCAM1P19320 739 aa13.25□□□□□ -0.29
LCN2-206ENST00000488391 CYP7A1P22680 504 aa13.25□□□□□ -0.29
LCN2-206ENST00000488391 ADCYAP1R1P41586 468 aa13.25□□□□□ -0.29
LCN2-206ENST00000488391 ZAP70P43403 619 aa13.25□□□□□ -0.29
LCN2-206ENST00000488391 USP14P54578 494 aa13.25□□□□□ -0.29
LCN2-206ENST00000488391 CCDC158Q5M9N0 1113 aa13.25□□□□□ -0.29
LCN2-206ENST00000488391 PRAMEF19Q5SWL8 479 aa13.25□□□□□ -0.29
LCN2-206ENST00000488391 TATDN1Q6P1N9 297 aa13.25□□□□□ -0.29
LCN2-206ENST00000488391 TRIM43Q96BQ3 446 aaPredicted RBP13.25□□□□□ -0.29
LCN2-206ENST00000488391 DBNDD2Q9BQY9 259 aa13.25□□□□□ -0.29
LCN2-206ENST00000488391 KIAA1683Q9H0B3 1180 aa13.25□□□□□ -0.29
LCN2-206ENST00000488391 RPAP3Q9H6T3 665 aaPredicted RBP13.25□□□□□ -0.29
LCN2-206ENST00000488391 PIH1D3Q9NQM4 214 aaKnown RBP13.25□□□□□ -0.29
LCN2-206ENST00000488391 RLFQ13129 1914 aa13.25□□□□□ -0.29
LCN2-206ENST00000488391 LTBP2Q14767 1821 aa13.25□□□□□ -0.29
LCN2-206ENST00000488391 SPDYE16A6NNV3 312 aaPredicted RBP13.24□□□□□ -0.29
LCN2-206ENST00000488391 IGHA2P01877 340 aa13.24□□□□□ -0.29
LCN2-206ENST00000488391 USP5P45974 858 aa13.24□□□□□ -0.29
LCN2-206ENST00000488391 SMAD3P84022 425 aaKnown RBP13.24□□□□□ -0.29
LCN2-206ENST00000488391 NUCB1Q02818 461 aa13.24□□□□□ -0.29
LCN2-206ENST00000488391 ABCB5Q2M3G0 1257 aa13.24□□□□□ -0.29
LCN2-206ENST00000488391 CERKLQ49MI3 558 aaPredicted RBP13.24□□□□□ -0.29
LCN2-206ENST00000488391 SSH3Q8TE77 659 aa13.24□□□□□ -0.29
LCN2-206ENST00000488391 SMCHD1A6NHR9 2005 aa13.23□□□□□ -0.29
LCN2-206ENST00000488391 MYH1P12882 1939 aa13.23□□□□□ -0.29
LCN2-206ENST00000488391 ADORA2AP29274 412 aa13.23□□□□□ -0.29
LCN2-206ENST00000488391 POLA2Q14181 598 aa13.23□□□□□ -0.29
LCN2-206ENST00000488391 TNNI3KQ59H18 835 aa13.23□□□□□ -0.29
LCN2-206ENST00000488391 LBX2Q6XYB7 198 aa13.23□□□□□ -0.29
LCN2-206ENST00000488391 MIGA1Q8NAN2 632 aa13.23□□□□□ -0.29
LCN2-206ENST00000488391 MOV10L1Q9BXT6 1211 aaKnown RBP13.23□□□□□ -0.29
LCN2-206ENST00000488391 CABP5Q9NP86 173 aa13.23□□□□□ -0.29
LCN2-206ENST00000488391 PDLIM7Q9NR12 457 aa13.23□□□□□ -0.29
LCN2-206ENST00000488391 SERPINB13Q9UIV8 391 aa13.23□□□□□ -0.29
LCN2-206ENST00000488391 FPGT-TNNI3KV9GXZ4 949 aa13.23□□□□□ -0.29
LCN2-206ENST00000488391 VCANP13611 3396 aa13.23□□□□□ -0.29
LCN2-206ENST00000488391 FOCADQ5VW36 1801 aa13.23□□□□□ -0.29
LCN2-206ENST00000488391 SEPT4O43236 478 aa13.22□□□□□ -0.29
LCN2-206ENST00000488391 COBLO75128 1261 aa13.22□□□□□ -0.29
LCN2-206ENST00000488391 TLE2Q04725 743 aa13.22□□□□□ -0.29
LCN2-206ENST00000488391 COG2Q14746 738 aa13.22□□□□□ -0.29
LCN2-206ENST00000488391 LRRC41Q15345 812 aa13.22□□□□□ -0.29
LCN2-206ENST00000488391 OLFML2BQ68BL8 750 aa13.22□□□□□ -0.29
LCN2-206ENST00000488391 SYMPKQ92797 1274 aaKnown RBP13.22□□□□□ -0.29
LCN2-206ENST00000488391 MYO9BQ13459 2157 aa13.22□□□□□ -0.29
LCN2-206ENST00000488391 STRNO43815 780 aa13.21□□□□□ -0.29
LCN2-206ENST00000488391 IDH1O75874 414 aaKnown RBP13.21□□□□□ -0.29
LCN2-206ENST00000488391 ERCC3P19447 782 aa13.21□□□□□ -0.29
LCN2-206ENST00000488391 ITGB8P26012 769 aa13.21□□□□□ -0.29
LCN2-206ENST00000488391 GUCY1A2P33402 732 aa13.21□□□□□ -0.29
LCN2-206ENST00000488391 EPHB4P54760 987 aa13.21□□□□□ -0.29
LCN2-206ENST00000488391 OS9Q13438 667 aaPredicted RBP13.21□□□□□ -0.29
LCN2-206ENST00000488391 SEPT2Q15019 361 aa13.21□□□□□ -0.29
LCN2-206ENST00000488391 SNX17Q15036 470 aa13.21□□□□□ -0.29
LCN2-206ENST00000488391 TTC6Q86TZ1 520 aa13.21□□□□□ -0.29
LCN2-206ENST00000488391 CHD1LQ86WJ1 897 aa13.21□□□□□ -0.29
LCN2-206ENST00000488391 RNPC3Q96LT9 517 aaKnown RBP13.21□□□□□ -0.29
LCN2-206ENST00000488391 GPR108Q9NPR9 543 aa13.21□□□□□ -0.29
LCN2-206ENST00000488391 HOXC10Q9NYD6 342 aa13.21□□□□□ -0.29
LCN2-206ENST00000488391 SHMT1P34896 483 aa13.2□□□□□ -0.3
LCN2-206ENST00000488391 PLCD1P51178 756 aa13.2□□□□□ -0.3
LCN2-206ENST00000488391 PLS1Q14651 629 aa13.2□□□□□ -0.3
LCN2-206ENST00000488391 GRIN2CQ14957 1233 aa13.2□□□□□ -0.3
LCN2-206ENST00000488391 HSP90AB4PQ58FF6 505 aa13.2□□□□□ -0.3
LCN2-206ENST00000488391 FAM47AQ5JRC9 791 aa13.2□□□□□ -0.3
LCN2-206ENST00000488391 MAGEB6Q8N7X4 407 aa13.2□□□□□ -0.3
LCN2-206ENST00000488391 TANGO6Q9C0B7 1094 aa13.2□□□□□ -0.3
LCN2-206ENST00000488391 SPATC1LQ9H0A9 340 aa13.2□□□□□ -0.3
LCN2-206ENST00000488391 EHD4Q9H223 541 aa13.2□□□□□ -0.3
LCN2-206ENST00000488391 TACC3Q9Y6A5 838 aa13.2□□□□□ -0.3
LCN2-206ENST00000488391 A0A1W2PRG0 241 aa13.19□□□□□ -0.3
LCN2-206ENST00000488391 MPHOSPH10O00566 681 aaKnown RBP13.19□□□□□ -0.3
LCN2-206ENST00000488391 RAB11FIP3O75154 756 aa13.19□□□□□ -0.3
LCN2-206ENST00000488391 SURF6O75683 361 aaKnown RBP13.19□□□□□ -0.3
LCN2-206ENST00000488391 COL9A1P20849 921 aa13.19□□□□□ -0.3
LCN2-206ENST00000488391 ANKRD45Q5TZF3 282 aa13.19□□□□□ -0.3
LCN2-206ENST00000488391 SAMD1Q6SPF0 538 aaPredicted RBP13.19□□□□□ -0.3
LCN2-206ENST00000488391 NCAPG2Q86XI2 1143 aa13.19□□□□□ -0.3
LCN2-206ENST00000488391 USP38Q8NB14 1042 aa13.19□□□□□ -0.3
LCN2-206ENST00000488391 ZNF512BQ96KM6 892 aaPredicted RBP13.19□□□□□ -0.3
LCN2-206ENST00000488391 CCDC8Q9H0W5 538 aaPredicted RBP13.19□□□□□ -0.3
LCN2-206ENST00000488391 SLC5A4Q9NY91 659 aa13.19□□□□□ -0.3
LCN2-206ENST00000488391 ZBTB47Q9UFB7 747 aaPredicted RBP13.19□□□□□ -0.3
LCN2-206ENST00000488391 NOP58Q9Y2X3 529 aaKnown RBP13.19□□□□□ -0.3
LCN2-206ENST00000488391 ZNFX1Q9P2E3 1918 aaKnown RBP13.19□□□□□ -0.3
LCN2-206ENST00000488391 PGK1P00558 417 aa13.18□□□□□ -0.3
LCN2-206ENST00000488391 POLR3DP05423 398 aaPredicted RBP13.18□□□□□ -0.3
LCN2-206ENST00000488391 CLTBP09497 229 aa13.18□□□□□ -0.3
LCN2-206ENST00000488391 RAG1P15918 1043 aa13.18□□□□□ -0.3
LCN2-206ENST00000488391 KIAA1755Q5JYT7 1200 aa13.18□□□□□ -0.3
LCN2-206ENST00000488391 C1orf53Q5VUE5 145 aa13.18□□□□□ -0.3
LCN2-206ENST00000488391 SHCBP1Q8NEM2 672 aa13.18□□□□□ -0.3
LCN2-206ENST00000488391 MAML3Q96JK9 1138 aa13.18□□□□□ -0.3
LCN2-206ENST00000488391 TLR7Q9NYK1 1049 aaKnown RBP13.18□□□□□ -0.3
LCN2-206ENST00000488391 DBNLQ9UJU6 430 aaKnown RBP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms