RNA–Protein interactions for RNA: ENST00000488250.5

RAPGEF3-211, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2

Gene RAPGEF3, Length 1,947 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-211ENST00000488250 EYA3Q99504 573 aa18.34■□□□□ 0.53
RAPGEF3-211ENST00000488250 TMEM47Q9BQJ4 181 aa18.34■□□□□ 0.53
RAPGEF3-211ENST00000488250 TMX4Q9H1E5 349 aaPredicted RBP18.34■□□□□ 0.53
RAPGEF3-211ENST00000488250 MYH1P12882 1939 aa18.34■□□□□ 0.53
RAPGEF3-211ENST00000488250 PALM3A6NDB9 673 aaPredicted RBP18.33■□□□□ 0.53
RAPGEF3-211ENST00000488250 LONRF3Q496Y0 759 aa18.33■□□□□ 0.53
RAPGEF3-211ENST00000488250 EARS2Q5JPH6 523 aaKnown RBP18.33■□□□□ 0.53
RAPGEF3-211ENST00000488250 CERS5Q8N5B7 392 aa18.33■□□□□ 0.53
RAPGEF3-211ENST00000488250 PLIN4Q96Q06 1357 aa18.33■□□□□ 0.53
RAPGEF3-211ENST00000488250 FAM205CA6NFA0 338 aa18.33■□□□□ 0.52
RAPGEF3-211ENST00000488250 STYK1Q6J9G0 422 aa18.33■□□□□ 0.52
RAPGEF3-211ENST00000488250 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.33■□□□□ 0.52
RAPGEF3-211ENST00000488250 FERMT2Q96AC1 680 aa18.33■□□□□ 0.52
RAPGEF3-211ENST00000488250 TTC12Q9H892 705 aaPredicted RBP18.33■□□□□ 0.52
RAPGEF3-211ENST00000488250 HOOK1Q9UJC3 728 aaKnown RBP18.33■□□□□ 0.52
RAPGEF3-211ENST00000488250 A0A087WWV3 80 aa18.32■□□□□ 0.52
RAPGEF3-211ENST00000488250 NLRP5P59047 1200 aa18.32■□□□□ 0.52
RAPGEF3-211ENST00000488250 MDM2Q00987 491 aaPredicted RBP18.32■□□□□ 0.52
RAPGEF3-211ENST00000488250 GRIN1Q05586 938 aa18.32■□□□□ 0.52
RAPGEF3-211ENST00000488250 METTL16Q86W50 562 aaKnown RBP18.32■□□□□ 0.52
RAPGEF3-211ENST00000488250 AOPEPQ8N6M6 819 aa18.32■□□□□ 0.52
RAPGEF3-211ENST00000488250 CNNM3Q8NE01 707 aa18.32■□□□□ 0.52
RAPGEF3-211ENST00000488250 PIBF1Q8WXW3 757 aa18.32■□□□□ 0.52
RAPGEF3-211ENST00000488250 GABPAQ06546 454 aa18.31■□□□□ 0.52
RAPGEF3-211ENST00000488250 HHIPL2Q6UWX4 724 aa18.31■□□□□ 0.52
RAPGEF3-211ENST00000488250 STAG2Q8N3U4 1231 aa18.31■□□□□ 0.52
RAPGEF3-211ENST00000488250 ZNF830Q96NB3 372 aaPredicted RBP18.31■□□□□ 0.52
RAPGEF3-211ENST00000488250 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.31■□□□□ 0.52
RAPGEF3-211ENST00000488250 IKBKBO14920 756 aa18.31■□□□□ 0.52
RAPGEF3-211ENST00000488250 SMARCA1P28370 1054 aa18.31■□□□□ 0.52
RAPGEF3-211ENST00000488250 TTC38Q5R3I4 469 aa18.31■□□□□ 0.52
RAPGEF3-211ENST00000488250 GALNT17Q6IS24 598 aa18.31■□□□□ 0.52
RAPGEF3-211ENST00000488250 OLFM4Q6UX06 510 aa18.31■□□□□ 0.52
RAPGEF3-211ENST00000488250 PODNQ7Z5L7 613 aa18.31■□□□□ 0.52
RAPGEF3-211ENST00000488250 SPC24Q8NBT2 197 aa18.31■□□□□ 0.52
RAPGEF3-211ENST00000488250 STX8Q9UNK0 236 aa18.31■□□□□ 0.52
RAPGEF3-211ENST00000488250 TOP1P11387 765 aaKnown RBP18.3■□□□□ 0.52
RAPGEF3-211ENST00000488250 FKBP1AP62942 108 aaKnown RBP18.3■□□□□ 0.52
RAPGEF3-211ENST00000488250 NT5DC1Q5TFE4 455 aa18.3■□□□□ 0.52
RAPGEF3-211ENST00000488250 KANK3Q6NY19 840 aa18.3■□□□□ 0.52
RAPGEF3-211ENST00000488250 DAGLBQ8NCG7 672 aa18.3■□□□□ 0.52
RAPGEF3-211ENST00000488250 SPZ1Q9BXG8 430 aa18.3■□□□□ 0.52
RAPGEF3-211ENST00000488250 CSRNP2Q9H175 543 aa18.3■□□□□ 0.52
RAPGEF3-211ENST00000488250 KCNF1Q9H3M0 494 aa18.3■□□□□ 0.52
RAPGEF3-211ENST00000488250 TTF2Q9UNY4 1162 aaKnown RBP18.3■□□□□ 0.52
RAPGEF3-211ENST00000488250 MYO3BQ8WXR4 1341 aa18.3■□□□□ 0.52
RAPGEF3-211ENST00000488250 C10orf71Q711Q0 1435 aa18.29■□□□□ 0.52
RAPGEF3-211ENST00000488250 SMTNL1A8MU46 457 aa18.29■□□□□ 0.52
RAPGEF3-211ENST00000488250 VEGFAP15692 232 aaPredicted RBP18.29■□□□□ 0.52
RAPGEF3-211ENST00000488250 ATP2B1P20020 1258 aa18.29■□□□□ 0.52
RAPGEF3-211ENST00000488250 ATP2C1P98194 919 aaPredicted RBP18.29■□□□□ 0.52
RAPGEF3-211ENST00000488250 PNOCQ13519 176 aa18.29■□□□□ 0.52
RAPGEF3-211ENST00000488250 SLC35G1Q2M3R5 365 aa18.29■□□□□ 0.52
RAPGEF3-211ENST00000488250 MRIQ9BWK5 157 aa18.29■□□□□ 0.52
RAPGEF3-211ENST00000488250 PCDHA4Q9UN74 947 aa18.29■□□□□ 0.52
RAPGEF3-211ENST00000488250 M0R2N6 131 aa18.29■□□□□ 0.52
RAPGEF3-211ENST00000488250 BIN1O00499 593 aa18.29■□□□□ 0.52
RAPGEF3-211ENST00000488250 CYTH3O43739 400 aa18.29■□□□□ 0.52
RAPGEF3-211ENST00000488250 SPECC1Q5M775 1068 aa18.29■□□□□ 0.52
RAPGEF3-211ENST00000488250 C2CD5Q86YS7 1000 aa18.29■□□□□ 0.52
RAPGEF3-211ENST00000488250 FOXP4Q8IVH2 680 aaPredicted RBP18.29■□□□□ 0.52
RAPGEF3-211ENST00000488250 BLIDQ8IZY5 108 aa18.29■□□□□ 0.52
RAPGEF3-211ENST00000488250 SPTLC3Q9NUV7 552 aa18.29■□□□□ 0.52
RAPGEF3-211ENST00000488250 CLIP2Q9UDT6 1046 aa18.29■□□□□ 0.52
RAPGEF3-211ENST00000488250 POLR2DO15514 142 aaKnown RBP18.28■□□□□ 0.52
RAPGEF3-211ENST00000488250 NCAPHQ15003 741 aa18.28■□□□□ 0.52
RAPGEF3-211ENST00000488250 DOK7Q18PE1 504 aa18.28■□□□□ 0.52
RAPGEF3-211ENST00000488250 CCDC148Q8NFR7 591 aa18.28■□□□□ 0.52
RAPGEF3-211ENST00000488250 CEP95Q96GE4 821 aa18.28■□□□□ 0.52
RAPGEF3-211ENST00000488250 PCDHA5Q9Y5H7 936 aa18.28■□□□□ 0.52
RAPGEF3-211ENST00000488250 H0YIN7 160 aa18.27■□□□□ 0.52
RAPGEF3-211ENST00000488250 WNT7AO00755 349 aa18.27■□□□□ 0.52
RAPGEF3-211ENST00000488250 ACTN4O43707 911 aaKnown RBP18.27■□□□□ 0.52
RAPGEF3-211ENST00000488250 SARSP49591 514 aaKnown RBP18.27■□□□□ 0.52
RAPGEF3-211ENST00000488250 TPM4P67936 248 aa18.27■□□□□ 0.52
RAPGEF3-211ENST00000488250 POSTNQ15063 836 aa18.27■□□□□ 0.52
RAPGEF3-211ENST00000488250 NOM1Q5C9Z4 860 aaKnown RBP18.27■□□□□ 0.52
RAPGEF3-211ENST00000488250 MSL1Q68DK7 614 aa18.27■□□□□ 0.52
RAPGEF3-211ENST00000488250 DRC7Q8IY82 874 aa18.27■□□□□ 0.52
RAPGEF3-211ENST00000488250 FBXW7Q969H0 707 aa18.27■□□□□ 0.52
RAPGEF3-211ENST00000488250 ZNF622Q969S3 477 aaKnown RBP eCLIP18.27■□□□□ 0.52
RAPGEF3-211ENST00000488250 TEKT1Q969V4 418 aa18.27■□□□□ 0.52
RAPGEF3-211ENST00000488250 BARHL2Q9NY43 387 aa18.27■□□□□ 0.52
RAPGEF3-211ENST00000488250 SWAP70Q9UH65 585 aa18.27■□□□□ 0.52
RAPGEF3-211ENST00000488250 IGKV6D-41A0A0C4DH26 115 aa18.27■□□□□ 0.51
RAPGEF3-211ENST00000488250 PARP1P09874 1014 aaKnown RBP18.27■□□□□ 0.51
RAPGEF3-211ENST00000488250 PTGS1P23219 599 aa18.27■□□□□ 0.51
RAPGEF3-211ENST00000488250 PIK3AP1Q6ZUJ8 805 aa18.27■□□□□ 0.51
RAPGEF3-211ENST00000488250 ILDR2Q71H61 639 aa18.27■□□□□ 0.51
RAPGEF3-211ENST00000488250 CCDC186Q7Z3E2 898 aa18.27■□□□□ 0.51
RAPGEF3-211ENST00000488250 KIAA1524Q8TCG1 905 aa18.27■□□□□ 0.51
RAPGEF3-211ENST00000488250 USP40Q9NVE5 1235 aa18.27■□□□□ 0.51
RAPGEF3-211ENST00000488250 SERTAD1Q9UHV2 236 aa18.27■□□□□ 0.51
RAPGEF3-211ENST00000488250 KLRF2D3W0D1 207 aa18.26■□□□□ 0.51
RAPGEF3-211ENST00000488250 G3V3G9 751 aa18.26■□□□□ 0.51
RAPGEF3-211ENST00000488250 STXBP3O00186 592 aa18.26■□□□□ 0.51
RAPGEF3-211ENST00000488250 MYO1BO43795 1136 aa18.26■□□□□ 0.51
RAPGEF3-211ENST00000488250 TERF1P54274 439 aa18.26■□□□□ 0.51
RAPGEF3-211ENST00000488250 ZNF174Q15697 407 aa18.26■□□□□ 0.51
RAPGEF3-211ENST00000488250 DCAF8Q5TAQ9 597 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms