RNA–Protein interactions for RNA: ENST00000488235.1

PCYT1A-215, Transcript of phosphate cytidylyltransferase 1, choline, alpha, humanhuman

TSL 3

Gene PCYT1A, Length 466 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCYT1A-215ENST00000488235 TMEM179Q6ZVK1 233 aa13.53□□□□□ -0.24
PCYT1A-215ENST00000488235 SPICE1Q8N0Z3 855 aa13.53□□□□□ -0.24
PCYT1A-215ENST00000488235 OSBP2Q969R2 916 aa13.53□□□□□ -0.24
PCYT1A-215ENST00000488235 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.53□□□□□ -0.24
PCYT1A-215ENST00000488235 HMX1Q9NP08 348 aaPredicted RBP13.53□□□□□ -0.24
PCYT1A-215ENST00000488235 ZKSCAN1P17029 563 aaPredicted RBP13.52□□□□□ -0.25
PCYT1A-215ENST00000488235 PTPREP23469 700 aa13.52□□□□□ -0.25
PCYT1A-215ENST00000488235 C16orf86Q6ZW13 317 aa13.52□□□□□ -0.25
PCYT1A-215ENST00000488235 CCAR1Q8IX12 1150 aaKnown RBP13.52□□□□□ -0.25
PCYT1A-215ENST00000488235 NPLOC4Q8TAT6 608 aa13.52□□□□□ -0.25
PCYT1A-215ENST00000488235 GTF3C2Q8WUA4 911 aaPredicted RBP13.52□□□□□ -0.25
PCYT1A-215ENST00000488235 STRBPQ96SI9 672 aaKnown RBP13.52□□□□□ -0.25
PCYT1A-215ENST00000488235 HTATIP2Q9BUP3 242 aa13.52□□□□□ -0.25
PCYT1A-215ENST00000488235 SWAP70Q9UH65 585 aa13.52□□□□□ -0.25
PCYT1A-215ENST00000488235 OGDHLQ9ULD0 1010 aa13.52□□□□□ -0.25
PCYT1A-215ENST00000488235 MYH7P12883 1935 aa13.52□□□□□ -0.25
PCYT1A-215ENST00000488235 PFASO15067 1338 aa13.51□□□□□ -0.25
PCYT1A-215ENST00000488235 M0R2C6 588 aa13.51□□□□□ -0.25
PCYT1A-215ENST00000488235 RGS2P41220 211 aa13.51□□□□□ -0.25
PCYT1A-215ENST00000488235 ICA1Q05084 483 aa13.51□□□□□ -0.25
PCYT1A-215ENST00000488235 MAP2K5Q13163 448 aa13.51□□□□□ -0.25
PCYT1A-215ENST00000488235 GRB14Q14449 540 aa13.51□□□□□ -0.25
PCYT1A-215ENST00000488235 WDR78Q5VTH9 848 aa13.51□□□□□ -0.25
PCYT1A-215ENST00000488235 LHX8Q68G74 356 aa13.51□□□□□ -0.25
PCYT1A-215ENST00000488235 STK11IPQ8N1F8 1099 aa13.51□□□□□ -0.25
PCYT1A-215ENST00000488235 KBTBD3Q8NAB2 608 aa13.51□□□□□ -0.25
PCYT1A-215ENST00000488235 APBA2Q99767 749 aa13.51□□□□□ -0.25
PCYT1A-215ENST00000488235 MOV10L1Q9BXT6 1211 aaKnown RBP13.51□□□□□ -0.25
PCYT1A-215ENST00000488235 TANGO6Q9C0B7 1094 aa13.51□□□□□ -0.25
PCYT1A-215ENST00000488235 EPB41L4AQ9HCS5 686 aaPredicted RBP13.51□□□□□ -0.25
PCYT1A-215ENST00000488235 TMX2Q9Y320 296 aa13.51□□□□□ -0.25
PCYT1A-215ENST00000488235 A0A0G2JMZ2 1700 aa13.5□□□□□ -0.25
PCYT1A-215ENST00000488235 GSG1L2A8MUP6 293 aa13.5□□□□□ -0.25
PCYT1A-215ENST00000488235 IGHA2P01877 340 aa13.5□□□□□ -0.25
PCYT1A-215ENST00000488235 EEF2P13639 858 aaKnown RBP13.5□□□□□ -0.25
PCYT1A-215ENST00000488235 COG2Q14746 738 aa13.5□□□□□ -0.25
PCYT1A-215ENST00000488235 NECAB2Q7Z6G3 386 aa13.5□□□□□ -0.25
PCYT1A-215ENST00000488235 PI4K2BQ8TCG2 481 aa13.5□□□□□ -0.25
PCYT1A-215ENST00000488235 ATG4CQ96DT6 458 aa13.5□□□□□ -0.25
PCYT1A-215ENST00000488235 SEC62Q99442 399 aaKnown RBP13.5□□□□□ -0.25
PCYT1A-215ENST00000488235 VCPKMTQ9H867 229 aa13.5□□□□□ -0.25
PCYT1A-215ENST00000488235 FBXO28Q9NVF7 368 aa13.5□□□□□ -0.25
PCYT1A-215ENST00000488235 EVI5O60447 810 aa13.49□□□□□ -0.25
PCYT1A-215ENST00000488235 CYP2C19P33261 490 aa13.49□□□□□ -0.25
PCYT1A-215ENST00000488235 CCNA1P78396 465 aa13.49□□□□□ -0.25
PCYT1A-215ENST00000488235 ANKLE1Q8NAG6 615 aa13.49□□□□□ -0.25
PCYT1A-215ENST00000488235 TRPV1Q8NER1 839 aa13.49□□□□□ -0.25
PCYT1A-215ENST00000488235 SPATC1LQ9H0A9 340 aa13.49□□□□□ -0.25
PCYT1A-215ENST00000488235 EYSQ5T1H1 3165 aa13.48□□□□□ -0.25
PCYT1A-215ENST00000488235 SLC15A5A6NIM6 579 aa13.48□□□□□ -0.25
PCYT1A-215ENST00000488235 RNF113AO15541 343 aaKnown RBP13.48□□□□□ -0.25
PCYT1A-215ENST00000488235 GPAA1O43292 621 aa13.48□□□□□ -0.25
PCYT1A-215ENST00000488235 COBLO75128 1261 aa13.48□□□□□ -0.25
PCYT1A-215ENST00000488235 HOXC6P09630 235 aa13.48□□□□□ -0.25
PCYT1A-215ENST00000488235 ERCC3P19447 782 aa13.48□□□□□ -0.25
PCYT1A-215ENST00000488235 RASA1P20936 1047 aa13.48□□□□□ -0.25
PCYT1A-215ENST00000488235 DSG3P32926 999 aa13.48□□□□□ -0.25
PCYT1A-215ENST00000488235 RRP1P56182 461 aaKnown RBP13.48□□□□□ -0.25
PCYT1A-215ENST00000488235 ATP2B2Q01814 1243 aa13.48□□□□□ -0.25
PCYT1A-215ENST00000488235 TMEM132BQ14DG7 1078 aa13.48□□□□□ -0.25
PCYT1A-215ENST00000488235 ZSCAN25Q6NSZ9 544 aa13.48□□□□□ -0.25
PCYT1A-215ENST00000488235 SAMD1Q6SPF0 538 aaPredicted RBP13.48□□□□□ -0.25
PCYT1A-215ENST00000488235 C7orf61Q8IZ16 206 aa13.48□□□□□ -0.25
PCYT1A-215ENST00000488235 APPBP2Q92624 585 aa13.48□□□□□ -0.25
PCYT1A-215ENST00000488235 LPAR1Q92633 364 aa13.48□□□□□ -0.25
PCYT1A-215ENST00000488235 CCDC17Q96LX7 622 aa13.48□□□□□ -0.25
PCYT1A-215ENST00000488235 NBPF3Q9H094 633 aa13.48□□□□□ -0.25
PCYT1A-215ENST00000488235 CWC22Q9HCG8 908 aaKnown RBP13.48□□□□□ -0.25
PCYT1A-215ENST00000488235 STAP2Q9UGK3 403 aa13.48□□□□□ -0.25
PCYT1A-215ENST00000488235 NR2E3Q9Y5X4 410 aa13.48□□□□□ -0.25
PCYT1A-215ENST00000488235 MYH8P13535 1937 aa13.47□□□□□ -0.25
PCYT1A-215ENST00000488235 SALL3Q9BXA9 1300 aa13.47□□□□□ -0.25
PCYT1A-215ENST00000488235 FLOT1O75955 427 aa13.47□□□□□ -0.25
PCYT1A-215ENST00000488235 COL6A1P12109 1028 aa13.47□□□□□ -0.25
PCYT1A-215ENST00000488235 ADORA2AP29274 412 aa13.47□□□□□ -0.25
PCYT1A-215ENST00000488235 SBK1Q52WX2 424 aa13.47□□□□□ -0.25
PCYT1A-215ENST00000488235 TRMT44Q8IYL2 757 aaKnown RBP13.47□□□□□ -0.25
PCYT1A-215ENST00000488235 CRBNQ96SW2 442 aa13.47□□□□□ -0.25
PCYT1A-215ENST00000488235 NUP88Q99567 741 aaPredicted RBP13.47□□□□□ -0.25
PCYT1A-215ENST00000488235 C11orf49Q9H6J7 331 aa13.47□□□□□ -0.25
PCYT1A-215ENST00000488235 ARHGEF10LQ9HCE6 1279 aa13.47□□□□□ -0.25
PCYT1A-215ENST00000488235 HOXC10Q9NYD6 342 aa13.47□□□□□ -0.25
PCYT1A-215ENST00000488235 ARPP21Q9UBL0 812 aaPredicted RBP13.47□□□□□ -0.25
PCYT1A-215ENST00000488235 ZMYND8Q9ULU4 1186 aaPredicted RBP13.47□□□□□ -0.25
PCYT1A-215ENST00000488235 GREB1LQ9C091 1923 aaPredicted RBP13.47□□□□□ -0.25
PCYT1A-215ENST00000488235 ROBO3Q96MS0 1386 aa13.46□□□□□ -0.25
PCYT1A-215ENST00000488235 PARP14Q460N5 1801 aa13.46□□□□□ -0.25
PCYT1A-215ENST00000488235 CDH23Q9H251 3354 aa13.46□□□□□ -0.25
PCYT1A-215ENST00000488235 MINDY4BA8MYZ0 360 aa13.46□□□□□ -0.25
PCYT1A-215ENST00000488235 WDR46O15213 610 aaKnown RBP13.46□□□□□ -0.25
PCYT1A-215ENST00000488235 FOXP2O15409 715 aa13.46□□□□□ -0.25
PCYT1A-215ENST00000488235 PRDM1O75626 825 aa13.46□□□□□ -0.25
PCYT1A-215ENST00000488235 CAPN2P17655 700 aa13.46□□□□□ -0.25
PCYT1A-215ENST00000488235 DDRGK1Q96HY6 314 aa13.46□□□□□ -0.25
PCYT1A-215ENST00000488235 GPATCH3Q96I76 525 aa13.46□□□□□ -0.25
PCYT1A-215ENST00000488235 ADAMTS5Q9UNA0 930 aa13.46□□□□□ -0.25
PCYT1A-215ENST00000488235 IVNS1ABPQ9Y6Y0 642 aa13.46□□□□□ -0.25
PCYT1A-215ENST00000488235 SOX1O00570 391 aaPredicted RBP13.45□□□□□ -0.26
PCYT1A-215ENST00000488235 GLRX3O76003 335 aaKnown RBP13.45□□□□□ -0.26
PCYT1A-215ENST00000488235 CYBAP13498 195 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms