RNA–Protein interactions for RNA: ENST00000487927.5

TRIM8-204, Transcript of tripartite motif containing 8, humanhuman

TSL 3

Gene TRIM8, Length 761 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM8-204ENST00000487927 KIAA1755Q5JYT7 1200 aa24.34■■□□□ 1.49
TRIM8-204ENST00000487927 CLEC10AQ8IUN9 316 aa24.34■■□□□ 1.49
TRIM8-204ENST00000487927 CDK8P49336 464 aa24.33■■□□□ 1.49
TRIM8-204ENST00000487927 CTR9Q6PD62 1173 aa24.33■■□□□ 1.49
TRIM8-204ENST00000487927 C16orf86Q6ZW13 317 aa24.33■■□□□ 1.49
TRIM8-204ENST00000487927 CCAR1Q8IX12 1150 aaKnown RBP24.33■■□□□ 1.49
TRIM8-204ENST00000487927 HMX1Q9NP08 348 aaPredicted RBP24.33■■□□□ 1.49
TRIM8-204ENST00000487927 TSHZ2Q9NRE2 1034 aa24.33■■□□□ 1.49
TRIM8-204ENST00000487927 GREB1LQ9C091 1923 aaPredicted RBP24.32■■□□□ 1.48
TRIM8-204ENST00000487927 IGHDP01880 384 aa24.32■■□□□ 1.48
TRIM8-204ENST00000487927 RGS2P41220 211 aa24.32■■□□□ 1.48
TRIM8-204ENST00000487927 CCL14Q16627 93 aa24.32■■□□□ 1.48
TRIM8-204ENST00000487927 KBTBD3Q8NAB2 608 aa24.32■■□□□ 1.48
TRIM8-204ENST00000487927 DIS3LQ8TF46 1054 aaKnown RBP24.32■■□□□ 1.48
TRIM8-204ENST00000487927 PRKAR2AP13861 404 aaKnown RBP24.31■■□□□ 1.48
TRIM8-204ENST00000487927 CCNA1P78396 465 aa24.31■■□□□ 1.48
TRIM8-204ENST00000487927 STRBPQ96SI9 672 aaKnown RBP24.31■■□□□ 1.48
TRIM8-204ENST00000487927 APBA2Q99767 749 aa24.31■■□□□ 1.48
TRIM8-204ENST00000487927 ZKSCAN1P17029 563 aaPredicted RBP24.3■■□□□ 1.48
TRIM8-204ENST00000487927 MNX1P50219 401 aaPredicted RBP24.3■■□□□ 1.48
TRIM8-204ENST00000487927 ICA1Q05084 483 aa24.3■■□□□ 1.48
TRIM8-204ENST00000487927 MAP2K5Q13163 448 aa24.3■■□□□ 1.48
TRIM8-204ENST00000487927 TRMT44Q8IYL2 757 aaKnown RBP24.3■■□□□ 1.48
TRIM8-204ENST00000487927 OSBP2Q969R2 916 aa24.3■■□□□ 1.48
TRIM8-204ENST00000487927 GPATCH3Q96I76 525 aa24.3■■□□□ 1.48
TRIM8-204ENST00000487927 PAWRQ96IZ0 340 aaKnown RBP24.3■■□□□ 1.48
TRIM8-204ENST00000487927 CCDC17Q96LX7 622 aa24.3■■□□□ 1.48
TRIM8-204ENST00000487927 TMX2Q9Y320 296 aa24.3■■□□□ 1.48
TRIM8-204ENST00000487927 FRMPD3Q5JV73 1810 aa24.3■■□□□ 1.48
TRIM8-204ENST00000487927 CACNB2Q08289 660 aaPredicted RBP24.29■■□□□ 1.48
TRIM8-204ENST00000487927 COG2Q14746 738 aa24.29■■□□□ 1.48
TRIM8-204ENST00000487927 AMOTL1Q8IY63 956 aa24.29■■□□□ 1.48
TRIM8-204ENST00000487927 ANKLE1Q8NAG6 615 aa24.29■■□□□ 1.48
TRIM8-204ENST00000487927 DDRGK1Q96HY6 314 aa24.29■■□□□ 1.48
TRIM8-204ENST00000487927 TANGO6Q9C0B7 1094 aa24.29■■□□□ 1.48
TRIM8-204ENST00000487927 ARHGEF10LQ9HCE6 1279 aa24.29■■□□□ 1.48
TRIM8-204ENST00000487927 GSG1L2A8MUP6 293 aa24.28■■□□□ 1.48
TRIM8-204ENST00000487927 PTPREP23469 700 aa24.28■■□□□ 1.48
TRIM8-204ENST00000487927 APPBP2Q92624 585 aa24.28■■□□□ 1.48
TRIM8-204ENST00000487927 CWC22Q9HCG8 908 aaKnown RBP24.28■■□□□ 1.48
TRIM8-204ENST00000487927 ARPP21Q9UBL0 812 aaPredicted RBP24.28■■□□□ 1.48
TRIM8-204ENST00000487927 OGDHLQ9ULD0 1010 aa24.28■■□□□ 1.48
TRIM8-204ENST00000487927 COL11A1P12107 1806 aaPredicted RBP24.28■■□□□ 1.48
TRIM8-204ENST00000487927 ZNF236Q9UL36 1845 aa24.28■■□□□ 1.48
TRIM8-204ENST00000487927 SLC15A5A6NIM6 579 aa24.27■■□□□ 1.48
TRIM8-204ENST00000487927 RNF113AO15541 343 aaKnown RBP24.27■■□□□ 1.48
TRIM8-204ENST00000487927 WDR78Q5VTH9 848 aa24.27■■□□□ 1.48
TRIM8-204ENST00000487927 CHRDL2Q6WN34 429 aa24.27■■□□□ 1.48
TRIM8-204ENST00000487927 SPICE1Q8N0Z3 855 aa24.27■■□□□ 1.48
TRIM8-204ENST00000487927 OTUD7AQ8TE49 926 aaPredicted RBP24.27■■□□□ 1.48
TRIM8-204ENST00000487927 LPAR1Q92633 364 aa24.27■■□□□ 1.48
TRIM8-204ENST00000487927 VCPKMTQ9H867 229 aa24.27■■□□□ 1.48
TRIM8-204ENST00000487927 HOXC10Q9NYD6 342 aa24.27■■□□□ 1.48
TRIM8-204ENST00000487927 FLRT1Q9NZU1 646 aa24.27■■□□□ 1.48
TRIM8-204ENST00000487927 GLRX3O76003 335 aaKnown RBP24.26■■□□□ 1.47
TRIM8-204ENST00000487927 CCND3P30281 292 aaPredicted RBP24.26■■□□□ 1.47
TRIM8-204ENST00000487927 DSG3P32926 999 aa24.26■■□□□ 1.47
TRIM8-204ENST00000487927 FXR1P51114 621 aaKnown RBP eCLIP24.26■■□□□ 1.47
TRIM8-204ENST00000487927 GRB14Q14449 540 aa24.26■■□□□ 1.47
TRIM8-204ENST00000487927 SBK1Q52WX2 424 aa24.26■■□□□ 1.47
TRIM8-204ENST00000487927 NECAB2Q7Z6G3 386 aa24.26■■□□□ 1.47
TRIM8-204ENST00000487927 PI4K2BQ8TCG2 481 aa24.26■■□□□ 1.47
TRIM8-204ENST00000487927 MOV10L1Q9BXT6 1211 aaKnown RBP24.26■■□□□ 1.47
TRIM8-204ENST00000487927 TTC41PQ6P2S7 1318 aa24.26■■□□□ 1.47
TRIM8-204ENST00000487927 EEF2P13639 858 aaKnown RBP24.25■■□□□ 1.47
TRIM8-204ENST00000487927 SMC5Q8IY18 1101 aa24.25■■□□□ 1.47
TRIM8-204ENST00000487927 GNL3Q9BVP2 549 aaKnown RBP eCLIP24.25■■□□□ 1.47
TRIM8-204ENST00000487927 SH2D4AQ9H788 454 aa24.25■■□□□ 1.47
TRIM8-204ENST00000487927 EPB41L4AQ9HCS5 686 aaPredicted RBP24.25■■□□□ 1.47
TRIM8-204ENST00000487927 NR2E3Q9Y5X4 410 aa24.25■■□□□ 1.47
TRIM8-204ENST00000487927 M0R2C6 588 aa24.24■■□□□ 1.47
TRIM8-204ENST00000487927 ZFYP08048 801 aaPredicted RBP24.24■■□□□ 1.47
TRIM8-204ENST00000487927 HOXC6P09630 235 aa24.24■■□□□ 1.47
TRIM8-204ENST00000487927 LHX8Q68G74 356 aa24.24■■□□□ 1.47
TRIM8-204ENST00000487927 GIMAP6Q6P9H5 292 aa24.24■■□□□ 1.47
TRIM8-204ENST00000487927 NPLOC4Q8TAT6 608 aa24.24■■□□□ 1.47
TRIM8-204ENST00000487927 SPATC1LQ9H0A9 340 aa24.24■■□□□ 1.47
TRIM8-204ENST00000487927 ROBO3Q96MS0 1386 aa24.24■■□□□ 1.47
TRIM8-204ENST00000487927 ZNFX1Q9P2E3 1918 aaKnown RBP24.23■■□□□ 1.47
TRIM8-204ENST00000487927 WDR46O15213 610 aaKnown RBP24.23■■□□□ 1.47
TRIM8-204ENST00000487927 GPAA1O43292 621 aa24.23■■□□□ 1.47
TRIM8-204ENST00000487927 EVI5O60447 810 aa24.23■■□□□ 1.47
TRIM8-204ENST00000487927 ATG4CQ96DT6 458 aa24.23■■□□□ 1.47
TRIM8-204ENST00000487927 PRO3102Q9H379 93 aa24.23■■□□□ 1.47
TRIM8-204ENST00000487927 KANSL2Q9H9L4 492 aa24.23■■□□□ 1.47
TRIM8-204ENST00000487927 IVNS1ABPQ9Y6Y0 642 aa24.23■■□□□ 1.47
TRIM8-204ENST00000487927 RANBP2P49792 3224 aaKnown RBP24.23■■□□□ 1.47
TRIM8-204ENST00000487927 FLOT1O75955 427 aa24.22■■□□□ 1.47
TRIM8-204ENST00000487927 IGHA2P01877 340 aa24.22■■□□□ 1.47
TRIM8-204ENST00000487927 RASA1P20936 1047 aa24.22■■□□□ 1.47
TRIM8-204ENST00000487927 MB21D1Q8N884 522 aa24.22■■□□□ 1.47
TRIM8-204ENST00000487927 SHCBP1Q8NEM2 672 aa24.22■■□□□ 1.47
TRIM8-204ENST00000487927 NBPF3Q9H094 633 aa24.22■■□□□ 1.47
TRIM8-204ENST00000487927 RBM27Q9P2N5 1060 aaKnown RBP24.22■■□□□ 1.47
TRIM8-204ENST00000487927 MYH4Q9Y623 1939 aa24.22■■□□□ 1.47
TRIM8-204ENST00000487927 SALL3Q9BXA9 1300 aa24.21■■□□□ 1.47
TRIM8-204ENST00000487927 ERCC3P19447 782 aa24.21■■□□□ 1.47
TRIM8-204ENST00000487927 ATP2B2Q01814 1243 aa24.21■■□□□ 1.47
TRIM8-204ENST00000487927 STK11IPQ8N1F8 1099 aa24.21■■□□□ 1.47
TRIM8-204ENST00000487927 C11orf49Q9H6J7 331 aa24.21■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms