RNA–Protein interactions for RNA: ENST00000487739.1

CCDC66-221, Transcript of coiled-coil domain containing 66, humanhuman

TSL 3

Gene CCDC66, Length 443 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-221ENST00000487739 SYTL4Q96C24 671 aaPredicted RBP7.21□□□□□ -1.26
CCDC66-221ENST00000487739 DIRC2Q96SL1 478 aa7.21□□□□□ -1.26
CCDC66-221ENST00000487739 BCL11AQ9H165 835 aa7.21□□□□□ -1.26
CCDC66-221ENST00000487739 ADAMTS10Q9H324 1103 aa7.21□□□□□ -1.26
CCDC66-221ENST00000487739 NSUN3Q9H649 340 aaKnown RBP7.21□□□□□ -1.26
CCDC66-221ENST00000487739 ERVFC1P60507 584 aa7.2□□□□□ -1.26
CCDC66-221ENST00000487739 PDZD8Q8NEN9 1154 aa7.2□□□□□ -1.26
CCDC66-221ENST00000487739 DHX38Q92620 1227 aaKnown RBP7.2□□□□□ -1.26
CCDC66-221ENST00000487739 BCL2L13Q9BXK5 485 aa7.2□□□□□ -1.26
CCDC66-221ENST00000487739 LRRC3Q9BY71 257 aa7.2□□□□□ -1.26
CCDC66-221ENST00000487739 EPB41L4BQ9H329 900 aa7.2□□□□□ -1.26
CCDC66-221ENST00000487739 KCNQ5Q9NR82 932 aa7.2□□□□□ -1.26
CCDC66-221ENST00000487739 SUPT16HQ9Y5B9 1047 aaKnown RBP7.2□□□□□ -1.26
CCDC66-221ENST00000487739 PCDHA11Q9Y5I1 949 aa7.2□□□□□ -1.26
CCDC66-221ENST00000487739 ROBO2Q9HCK4 1378 aa7.2□□□□□ -1.26
CCDC66-221ENST00000487739 RBM47A0AV96 593 aaKnown RBP7.19□□□□□ -1.26
CCDC66-221ENST00000487739 TLR3O15455 904 aaKnown RBP7.19□□□□□ -1.26
CCDC66-221ENST00000487739 DNAJA2O60884 412 aa7.19□□□□□ -1.26
CCDC66-221ENST00000487739 GBP1P32455 592 aa7.19□□□□□ -1.26
CCDC66-221ENST00000487739 CLEC16AQ2KHT3 1053 aa7.19□□□□□ -1.26
CCDC66-221ENST00000487739 ZNF326Q5BKZ1 582 aaKnown RBP7.19□□□□□ -1.26
CCDC66-221ENST00000487739 OXR1Q8N573 874 aa7.19□□□□□ -1.26
CCDC66-221ENST00000487739 TOX2Q96NM4 488 aa7.19□□□□□ -1.26
CCDC66-221ENST00000487739 KIF2CQ99661 725 aa7.19□□□□□ -1.26
CCDC66-221ENST00000487739 KRTAP17-1Q9BYP8 105 aa7.19□□□□□ -1.26
CCDC66-221ENST00000487739 COPRSQ9NQ92 184 aa7.19□□□□□ -1.26
CCDC66-221ENST00000487739 NFIBO00712 420 aa7.18□□□□□ -1.26
CCDC66-221ENST00000487739 RGS13O14921 159 aa7.18□□□□□ -1.26
CCDC66-221ENST00000487739 ZGLP1P0C6A0 271 aa7.18□□□□□ -1.26
CCDC66-221ENST00000487739 EIF4A3P38919 411 aaKnown RBP7.18□□□□□ -1.26
CCDC66-221ENST00000487739 RNF4P78317 190 aa7.18□□□□□ -1.26
CCDC66-221ENST00000487739 FBXL19Q6PCT2 694 aa7.18□□□□□ -1.26
CCDC66-221ENST00000487739 LILRA2Q8N149 483 aa7.18□□□□□ -1.26
CCDC66-221ENST00000487739 ASCC2Q9H1I8 757 aaPredicted RBP7.18□□□□□ -1.26
CCDC66-221ENST00000487739 DCP1AQ9NPI6 582 aaPredicted RBP7.18□□□□□ -1.26
CCDC66-221ENST00000487739 FITM1A5D6W6 292 aa7.17□□□□□ -1.26
CCDC66-221ENST00000487739 RAG1P15918 1043 aa7.17□□□□□ -1.26
CCDC66-221ENST00000487739 KRTAP19-4Q3LI73 84 aa7.17□□□□□ -1.26
CCDC66-221ENST00000487739 HS2ST1Q7LGA3 356 aa7.17□□□□□ -1.26
CCDC66-221ENST00000487739 GIPC2Q8TF65 315 aa7.17□□□□□ -1.26
CCDC66-221ENST00000487739 BRMS1Q9HCU9 246 aa7.17□□□□□ -1.26
CCDC66-221ENST00000487739 GMIPQ9P107 970 aa7.17□□□□□ -1.26
CCDC66-221ENST00000487739 GGT7Q9UJ14 662 aa7.17□□□□□ -1.26
CCDC66-221ENST00000487739 PCDHB14Q9Y5E9 798 aa7.17□□□□□ -1.26
CCDC66-221ENST00000487739 SHISA3A0PJX4 238 aa7.16□□□□□ -1.26
CCDC66-221ENST00000487739 SLC22A31A6NKX4 558 aa7.16□□□□□ -1.26
CCDC66-221ENST00000487739 GREM1O60565 184 aa7.16□□□□□ -1.26
CCDC66-221ENST00000487739 TRHRP34981 398 aaPredicted RBP7.16□□□□□ -1.26
CCDC66-221ENST00000487739 DUSP4Q13115 394 aa7.16□□□□□ -1.26
CCDC66-221ENST00000487739 ARSHQ5FYA8 562 aa7.16□□□□□ -1.26
CCDC66-221ENST00000487739 SPOCD1Q6ZMY3 1216 aa7.16□□□□□ -1.26
CCDC66-221ENST00000487739 ANKLE2Q86XL3 938 aa7.16□□□□□ -1.26
CCDC66-221ENST00000487739 ENOX1Q8TC92 643 aaKnown RBP7.16□□□□□ -1.26
CCDC66-221ENST00000487739 RNF32Q9H0A6 362 aa7.16□□□□□ -1.26
CCDC66-221ENST00000487739 ATE1O95260 518 aa7.15□□□□□ -1.26
CCDC66-221ENST00000487739 TEKQ02763 1124 aa7.15□□□□□ -1.26
CCDC66-221ENST00000487739 CHRNEQ04844 493 aa7.15□□□□□ -1.26
CCDC66-221ENST00000487739 NMIQ13287 307 aaPredicted RBP7.15□□□□□ -1.26
CCDC66-221ENST00000487739 MRPL58Q14197 206 aaKnown RBP7.15□□□□□ -1.26
CCDC66-221ENST00000487739 NR0B2Q15466 257 aa7.15□□□□□ -1.26
CCDC66-221ENST00000487739 CILP2Q8IUL8 1156 aa7.15□□□□□ -1.26
CCDC66-221ENST00000487739 ZSCAN18Q8TBC5 510 aaPredicted RBP7.15□□□□□ -1.26
CCDC66-221ENST00000487739 ZNF296Q8WUU4 475 aaPredicted RBP7.15□□□□□ -1.26
CCDC66-221ENST00000487739 VWCEQ96DN2 955 aa7.15□□□□□ -1.26
CCDC66-221ENST00000487739 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.15□□□□□ -1.26
CCDC66-221ENST00000487739 C19orf44Q9H6X5 657 aa7.15□□□□□ -1.26
CCDC66-221ENST00000487739 SP110Q9HB58 689 aa7.15□□□□□ -1.26
CCDC66-221ENST00000487739 UBOX5O94941 541 aa7.14□□□□□ -1.27
CCDC66-221ENST00000487739 TMEM253P0C7T8 217 aa7.14□□□□□ -1.27
CCDC66-221ENST00000487739 C1QTNF9P0C862 333 aa7.14□□□□□ -1.27
CCDC66-221ENST00000487739 OVOS1Q6IE37 1185 aa7.14□□□□□ -1.27
CCDC66-221ENST00000487739 SPPL2CQ8IUH8 684 aa7.14□□□□□ -1.27
CCDC66-221ENST00000487739 ANKS4BQ8N8V4 417 aa7.14□□□□□ -1.27
CCDC66-221ENST00000487739 SYTL5Q8TDW5 730 aaPredicted RBP7.14□□□□□ -1.27
CCDC66-221ENST00000487739 SLC26A8Q96RN1 970 aa7.14□□□□□ -1.27
CCDC66-221ENST00000487739 SLC6A17Q9H1V8 727 aa7.14□□□□□ -1.27
CCDC66-221ENST00000487739 CWC22Q9HCG8 908 aaKnown RBP7.14□□□□□ -1.27
CCDC66-221ENST00000487739 KRT1P04264 644 aa7.13□□□□□ -1.27
CCDC66-221ENST00000487739 CFPP27918 469 aa7.13□□□□□ -1.27
CCDC66-221ENST00000487739 CRKP46108 304 aa7.13□□□□□ -1.27
CCDC66-221ENST00000487739 RAD51AP2Q09MP3 1159 aa7.13□□□□□ -1.27
CCDC66-221ENST00000487739 FBLN7Q53RD9 439 aa7.13□□□□□ -1.27
CCDC66-221ENST00000487739 IRF2BP1Q8IU81 584 aa7.13□□□□□ -1.27
CCDC66-221ENST00000487739 LRRC56Q8IYG6 542 aaPredicted RBP7.13□□□□□ -1.27
CCDC66-221ENST00000487739 HDAC8Q9BY41 377 aa7.13□□□□□ -1.27
CCDC66-221ENST00000487739 EHMT1Q9H9B1 1298 aa7.13□□□□□ -1.27
CCDC66-221ENST00000487739 APOBRQ0VD83 1088 aa7.12□□□□□ -1.27
CCDC66-221ENST00000487739 TIGD5Q53EQ6 642 aa7.12□□□□□ -1.27
CCDC66-221ENST00000487739 LCE1DQ5T752 114 aa7.12□□□□□ -1.27
CCDC66-221ENST00000487739 CDCP2Q5VXM1 449 aa7.12□□□□□ -1.27
CCDC66-221ENST00000487739 RNF111Q6ZNA4 994 aa7.12□□□□□ -1.27
CCDC66-221ENST00000487739 ADAMTS1Q9UHI8 967 aa7.12□□□□□ -1.27
CCDC66-221ENST00000487739 TCAF2A6NFQ2 919 aa7.11□□□□□ -1.27
CCDC66-221ENST00000487739 MED14OSP0DP75 135 aa7.11□□□□□ -1.27
CCDC66-221ENST00000487739 GLDCP23378 1020 aa7.11□□□□□ -1.27
CCDC66-221ENST00000487739 CCNFP41002 786 aa7.11□□□□□ -1.27
CCDC66-221ENST00000487739 SNX17Q15036 470 aa7.11□□□□□ -1.27
CCDC66-221ENST00000487739 SEZ6Q53EL9 994 aa7.11□□□□□ -1.27
CCDC66-221ENST00000487739 NBPF12Q5TAG4 269 aaPredicted RBP7.11□□□□□ -1.27
CCDC66-221ENST00000487739 GK5Q6ZS86 529 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms