RNA–Protein interactions for RNA: ENST00000487689.1

UBR3-211, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 3

Gene UBR3, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-211ENST00000487689 CRELD1Q96HD1 420 aa6.93□□□□□ -1.3
UBR3-211ENST00000487689 KCNC2Q96PR1 638 aa6.93□□□□□ -1.3
UBR3-211ENST00000487689 TMEM59LQ9UK28 342 aa6.93□□□□□ -1.3
UBR3-211ENST00000487689 ADAMTS20P59510 1910 aa6.92□□□□□ -1.3
UBR3-211ENST00000487689 GBP2P32456 591 aaPredicted RBP6.92□□□□□ -1.3
UBR3-211ENST00000487689 HK2P52789 917 aa6.92□□□□□ -1.3
UBR3-211ENST00000487689 KRTAP10-2P60368 255 aa6.92□□□□□ -1.3
UBR3-211ENST00000487689 TMC4Q7Z404 712 aa6.92□□□□□ -1.3
UBR3-211ENST00000487689 PHC3Q8NDX5 983 aa6.92□□□□□ -1.3
UBR3-211ENST00000487689 BAHD1Q8TBE0 780 aaPredicted RBP6.92□□□□□ -1.3
UBR3-211ENST00000487689 DHX38Q92620 1227 aaKnown RBP6.92□□□□□ -1.3
UBR3-211ENST00000487689 ASCC2Q9H1I8 757 aaPredicted RBP6.92□□□□□ -1.3
UBR3-211ENST00000487689 DUSP13Q9UII6 198 aa6.92□□□□□ -1.3
UBR3-211ENST00000487689 ERCC3P19447 782 aa6.91□□□□□ -1.3
UBR3-211ENST00000487689 LMNB2Q03252 620 aa6.91□□□□□ -1.3
UBR3-211ENST00000487689 CLEC16AQ2KHT3 1053 aa6.91□□□□□ -1.3
UBR3-211ENST00000487689 SNAP47Q5SQN1 464 aa6.91□□□□□ -1.3
UBR3-211ENST00000487689 GGNQ86UU5 652 aa6.91□□□□□ -1.3
UBR3-211ENST00000487689 OXR1Q8N573 874 aa6.91□□□□□ -1.3
UBR3-211ENST00000487689 ACSF2Q96CM8 615 aaPredicted RBP6.91□□□□□ -1.3
UBR3-211ENST00000487689 HPXP02790 462 aa6.9□□□□□ -1.3
UBR3-211ENST00000487689 DLG4P78352 724 aa6.9□□□□□ -1.3
UBR3-211ENST00000487689 EGR3Q06889 387 aa6.9□□□□□ -1.3
UBR3-211ENST00000487689 CAMK2GQ13555 558 aaPredicted RBP6.9□□□□□ -1.3
UBR3-211ENST00000487689 PHACTR4Q8IZ21 702 aa6.9□□□□□ -1.3
UBR3-211ENST00000487689 MARCH10Q8NA82 808 aaPredicted RBP6.9□□□□□ -1.3
UBR3-211ENST00000487689 GATAD2BQ8WXI9 593 aa6.9□□□□□ -1.3
UBR3-211ENST00000487689 MCOLN1Q9GZU1 580 aa6.9□□□□□ -1.3
UBR3-211ENST00000487689 RNF32Q9H0A6 362 aa6.9□□□□□ -1.3
UBR3-211ENST00000487689 RNF19AQ9NV58 838 aa6.9□□□□□ -1.3
UBR3-211ENST00000487689 KLHL3Q9UH77 587 aa6.9□□□□□ -1.3
UBR3-211ENST00000487689 USP31Q70CQ4 1352 aa6.9□□□□□ -1.31
UBR3-211ENST00000487689 CILPO75339 1184 aa6.89□□□□□ -1.31
UBR3-211ENST00000487689 TRHRP34981 398 aaPredicted RBP6.89□□□□□ -1.31
UBR3-211ENST00000487689 BNC2Q6ZN30 1099 aaPredicted RBP6.89□□□□□ -1.31
UBR3-211ENST00000487689 PRRT2Q7Z6L0 340 aaPredicted RBP6.89□□□□□ -1.31
UBR3-211ENST00000487689 DNAJB8Q8NHS0 232 aa6.89□□□□□ -1.31
UBR3-211ENST00000487689 CCDC74BQ96LY2 380 aa6.89□□□□□ -1.31
UBR3-211ENST00000487689 FAM161BQ96MY7 647 aa6.89□□□□□ -1.31
UBR3-211ENST00000487689 KRTAP9-8Q9BYQ0 159 aa6.89□□□□□ -1.31
UBR3-211ENST00000487689 RTEL1Q9NZ71 1219 aa6.89□□□□□ -1.31
UBR3-211ENST00000487689 CNOT6Q9ULM6 557 aaKnown RBP6.89□□□□□ -1.31
UBR3-211ENST00000487689 CORINQ9Y5Q5 1042 aa6.89□□□□□ -1.31
UBR3-211ENST00000487689 RBAK-RBAKDNI3L0D1 243 aa6.88□□□□□ -1.31
UBR3-211ENST00000487689 PF4P02776 101 aa6.88□□□□□ -1.31
UBR3-211ENST00000487689 GBP1P32455 592 aa6.88□□□□□ -1.31
UBR3-211ENST00000487689 SKOR2Q2VWA4 1001 aaPredicted RBP6.88□□□□□ -1.31
UBR3-211ENST00000487689 TMEM201Q5SNT2 666 aa6.88□□□□□ -1.31
UBR3-211ENST00000487689 TCERG1LQ5VWI1 586 aa6.88□□□□□ -1.31
UBR3-211ENST00000487689 SPPL2CQ8IUH8 684 aa6.88□□□□□ -1.31
UBR3-211ENST00000487689 RNF141Q8WVD5 230 aa6.88□□□□□ -1.31
UBR3-211ENST00000487689 TMEM74Q96NL1 305 aa6.88□□□□□ -1.31
UBR3-211ENST00000487689 GPR62Q9BZJ7 368 aa6.88□□□□□ -1.31
UBR3-211ENST00000487689 F6X3S4 739 aa6.87□□□□□ -1.31
UBR3-211ENST00000487689 TRIM13O60858 407 aa6.87□□□□□ -1.31
UBR3-211ENST00000487689 ESR1P03372 595 aa6.87□□□□□ -1.31
UBR3-211ENST00000487689 DUSP4Q13115 394 aa6.87□□□□□ -1.31
UBR3-211ENST00000487689 ZNF605Q86T29 641 aa6.87□□□□□ -1.31
UBR3-211ENST00000487689 TSPYL5Q86VY4 417 aaPredicted RBP6.87□□□□□ -1.31
UBR3-211ENST00000487689 SLFN12Q8IYM2 578 aa6.87□□□□□ -1.31
UBR3-211ENST00000487689 LILRA2Q8N149 483 aa6.87□□□□□ -1.31
UBR3-211ENST00000487689 DTWD2Q8NBA8 298 aa6.87□□□□□ -1.31
UBR3-211ENST00000487689 CXorf38Q8TB03 319 aa6.87□□□□□ -1.31
UBR3-211ENST00000487689 RSRP1Q9BUV0 290 aa6.87□□□□□ -1.31
UBR3-211ENST00000487689 ASPNQ9BXN1 380 aa6.87□□□□□ -1.31
UBR3-211ENST00000487689 ADAMTS10Q9H324 1103 aa6.87□□□□□ -1.31
UBR3-211ENST00000487689 REV1Q9UBZ9 1251 aa6.87□□□□□ -1.31
UBR3-211ENST00000487689 MYOCOSA0A1B0GUC4 107 aa6.86□□□□□ -1.31
UBR3-211ENST00000487689 FITM1A5D6W6 292 aa6.86□□□□□ -1.31
UBR3-211ENST00000487689 MINDY4BA8MYZ0 360 aa6.86□□□□□ -1.31
UBR3-211ENST00000487689 UPK3BL1B0FP48 263 aa6.86□□□□□ -1.31
UBR3-211ENST00000487689 UPK3BL2E5RIL1 263 aa6.86□□□□□ -1.31
UBR3-211ENST00000487689 F13A1P00488 732 aa6.86□□□□□ -1.31
UBR3-211ENST00000487689 NFKB2Q00653 900 aa6.86□□□□□ -1.31
UBR3-211ENST00000487689 MPP2Q14168 576 aa6.86□□□□□ -1.31
UBR3-211ENST00000487689 CCDC27Q2M243 656 aa6.86□□□□□ -1.31
UBR3-211ENST00000487689 CWF19L2Q2TBE0 894 aaKnown RBP6.86□□□□□ -1.31
UBR3-211ENST00000487689 GOLM1Q8NBJ4 401 aa6.86□□□□□ -1.31
UBR3-211ENST00000487689 PDZD8Q8NEN9 1154 aa6.86□□□□□ -1.31
UBR3-211ENST00000487689 Q96M66 194 aa6.86□□□□□ -1.31
UBR3-211ENST00000487689 DUSP15Q9H1R2 295 aaPredicted RBP6.86□□□□□ -1.31
UBR3-211ENST00000487689 KCTD3Q9Y597 815 aa6.86□□□□□ -1.31
UBR3-211ENST00000487689 SSU72P8A0A1W2PR75 194 aa6.85□□□□□ -1.31
UBR3-211ENST00000487689 GRIN3BO60391 1043 aa6.85□□□□□ -1.31
UBR3-211ENST00000487689 SEMA7AO75326 666 aa6.85□□□□□ -1.31
UBR3-211ENST00000487689 HTR3BO95264 441 aa6.85□□□□□ -1.31
UBR3-211ENST00000487689 RNF4P78317 190 aa6.85□□□□□ -1.31
UBR3-211ENST00000487689 CHRNEQ04844 493 aa6.85□□□□□ -1.31
UBR3-211ENST00000487689 FAM160A1Q05DH4 1040 aa6.85□□□□□ -1.31
UBR3-211ENST00000487689 ZNF385BQ569K4 471 aa6.85□□□□□ -1.31
UBR3-211ENST00000487689 IRF2BP1Q8IU81 584 aa6.85□□□□□ -1.31
UBR3-211ENST00000487689 KREMEN1Q96MU8 473 aa6.85□□□□□ -1.31
UBR3-211ENST00000487689 SLC6A17Q9H1V8 727 aa6.85□□□□□ -1.31
UBR3-211ENST00000487689 FAM221AA4D161 298 aa6.84□□□□□ -1.31
UBR3-211ENST00000487689 PEX10O60683 326 aa6.84□□□□□ -1.31
UBR3-211ENST00000487689 CTSHP09668 335 aa6.84□□□□□ -1.31
UBR3-211ENST00000487689 GAB4Q2WGN9 574 aa6.84□□□□□ -1.31
UBR3-211ENST00000487689 TMEM132EQ6IEE7 984 aa6.84□□□□□ -1.31
UBR3-211ENST00000487689 C19orf44Q9H6X5 657 aa6.84□□□□□ -1.31
UBR3-211ENST00000487689 SP110Q9HB58 689 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms