RNA–Protein interactions for RNA: ENST00000487615.5

TRA2B-214, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,485 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-214ENST00000487615 ARFGAP3Q9NP61 516 aa13.28□□□□□ -0.28
TRA2B-214ENST00000487615 PNPLA7Q6ZV29 1317 aa13.28□□□□□ -0.28
TRA2B-214ENST00000487615 ALDH1B1P30837 517 aa13.28□□□□□ -0.28
TRA2B-214ENST00000487615 NELFBQ8WX92 580 aa13.28□□□□□ -0.28
TRA2B-214ENST00000487615 SPAG5Q96R06 1193 aa13.28□□□□□ -0.28
TRA2B-214ENST00000487615 CCDC94Q9BW85 323 aaPredicted RBP13.28□□□□□ -0.28
TRA2B-214ENST00000487615 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.28□□□□□ -0.28
TRA2B-214ENST00000487615 VIRMAQ69YN4 1812 aaKnown RBP13.28□□□□□ -0.28
TRA2B-214ENST00000487615 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.28□□□□□ -0.28
TRA2B-214ENST00000487615 RCAN1P53805 252 aa13.28□□□□□ -0.28
TRA2B-214ENST00000487615 PCDHB6Q9Y5E3 794 aa13.28□□□□□ -0.28
TRA2B-214ENST00000487615 GOLGA8HP0CJ92 632 aa13.27□□□□□ -0.28
TRA2B-214ENST00000487615 SLC1A4P43007 532 aa13.27□□□□□ -0.28
TRA2B-214ENST00000487615 FAM193AP78312 1265 aa13.27□□□□□ -0.28
TRA2B-214ENST00000487615 KIF5AQ12840 1032 aa13.27□□□□□ -0.28
TRA2B-214ENST00000487615 GOLGA1Q92805 767 aa13.27□□□□□ -0.28
TRA2B-214ENST00000487615 TAB2Q9NYJ8 693 aa13.27□□□□□ -0.28
TRA2B-214ENST00000487615 DNA2P51530 1060 aa13.27□□□□□ -0.28
TRA2B-214ENST00000487615 GRAPQ13588 217 aa13.27□□□□□ -0.28
TRA2B-214ENST00000487615 GRAPLQ8TC17 118 aaPredicted RBP13.27□□□□□ -0.28
TRA2B-214ENST00000487615 USP40Q9NVE5 1235 aa13.27□□□□□ -0.28
TRA2B-214ENST00000487615 GUCA1BQ9UMX6 200 aa13.27□□□□□ -0.28
TRA2B-214ENST00000487615 SRPRBQ9Y5M8 271 aaKnown RBP13.27□□□□□ -0.28
TRA2B-214ENST00000487615 CAMTA2O94983 1202 aa13.27□□□□□ -0.29
TRA2B-214ENST00000487615 SERPINB2P05120 415 aa13.27□□□□□ -0.29
TRA2B-214ENST00000487615 USP17L8P0C7I0 530 aa13.27□□□□□ -0.29
TRA2B-214ENST00000487615 PRDX5P30044 214 aa13.27□□□□□ -0.29
TRA2B-214ENST00000487615 CALCRLQ16602 461 aa13.27□□□□□ -0.29
TRA2B-214ENST00000487615 TBC1D9BQ66K14 1250 aa13.27□□□□□ -0.29
TRA2B-214ENST00000487615 SARM1Q6SZW1 724 aa13.27□□□□□ -0.29
TRA2B-214ENST00000487615 TEKT1Q969V4 418 aa13.27□□□□□ -0.29
TRA2B-214ENST00000487615 GSDMAQ96QA5 445 aa13.27□□□□□ -0.29
TRA2B-214ENST00000487615 NOC4LQ9BVI4 516 aaKnown RBP13.27□□□□□ -0.29
TRA2B-214ENST00000487615 KIF1AQ12756 1690 aa13.27□□□□□ -0.29
TRA2B-214ENST00000487615 ERLIN2O94905 339 aa13.27□□□□□ -0.29
TRA2B-214ENST00000487615 LONRF3Q496Y0 759 aa13.27□□□□□ -0.29
TRA2B-214ENST00000487615 SNX29Q8TEQ0 813 aa13.27□□□□□ -0.29
TRA2B-214ENST00000487615 TRPC5Q9UL62 973 aaPredicted RBP13.27□□□□□ -0.29
TRA2B-214ENST00000487615 PLEKHG2Q9H7P9 1386 aa13.27□□□□□ -0.29
TRA2B-214ENST00000487615 GTPBP6O43824 516 aaPredicted RBP13.26□□□□□ -0.29
TRA2B-214ENST00000487615 BBOX1O75936 387 aa13.26□□□□□ -0.29
TRA2B-214ENST00000487615 KRT9P35527 623 aa13.26□□□□□ -0.29
TRA2B-214ENST00000487615 LONP1P36776 959 aaKnown RBP13.26□□□□□ -0.29
TRA2B-214ENST00000487615 CKAP4Q07065 602 aaKnown RBP13.26□□□□□ -0.29
TRA2B-214ENST00000487615 SPATA1Q5VX52 437 aa13.26□□□□□ -0.29
TRA2B-214ENST00000487615 TMED8Q6PL24 325 aaPredicted RBP13.26□□□□□ -0.29
TRA2B-214ENST00000487615 CCDC65Q8IXS2 484 aa13.26□□□□□ -0.29
TRA2B-214ENST00000487615 VEZTQ9HBM0 779 aa13.26□□□□□ -0.29
TRA2B-214ENST00000487615 SAMM50Q9Y512 469 aa13.26□□□□□ -0.29
TRA2B-214ENST00000487615 CACNA1FO60840 1977 aa13.26□□□□□ -0.29
TRA2B-214ENST00000487615 UBN2Q6ZU65 1347 aa13.26□□□□□ -0.29
TRA2B-214ENST00000487615 GOLGA6L10A6NI86 522 aa13.26□□□□□ -0.29
TRA2B-214ENST00000487615 ERCC5P28715 1186 aaPredicted RBP13.26□□□□□ -0.29
TRA2B-214ENST00000487615 CETN1Q12798 172 aa13.26□□□□□ -0.29
TRA2B-214ENST00000487615 DIXDC1Q155Q3 683 aa13.26□□□□□ -0.29
TRA2B-214ENST00000487615 TMEM132AQ24JP5 1023 aa13.26□□□□□ -0.29
TRA2B-214ENST00000487615 TMTC1Q8IUR5 882 aa13.26□□□□□ -0.29
TRA2B-214ENST00000487615 A0A0G2JLW4 131 aa13.26□□□□□ -0.29
TRA2B-214ENST00000487615 POLR3GO15318 223 aaPredicted RBP13.26□□□□□ -0.29
TRA2B-214ENST00000487615 NT5C2P49902 561 aa13.26□□□□□ -0.29
TRA2B-214ENST00000487615 ADKP55263 362 aaKnown RBP13.26□□□□□ -0.29
TRA2B-214ENST00000487615 SYCP3Q8IZU3 236 aa13.26□□□□□ -0.29
TRA2B-214ENST00000487615 BCL2L12Q9HB09 334 aa13.26□□□□□ -0.29
TRA2B-214ENST00000487615 SPATA31A1Q5TZJ5 1347 aa13.26□□□□□ -0.29
TRA2B-214ENST00000487615 SLFN14P0C7P3 912 aa13.25□□□□□ -0.29
TRA2B-214ENST00000487615 CYP26C1Q6V0L0 522 aa13.25□□□□□ -0.29
TRA2B-214ENST00000487615 NEK11Q8NG66 645 aa13.25□□□□□ -0.29
TRA2B-214ENST00000487615 NAA15Q9BXJ9 866 aaKnown RBP13.25□□□□□ -0.29
TRA2B-214ENST00000487615 NFAT5O94916 1531 aa13.25□□□□□ -0.29
TRA2B-214ENST00000487615 TACC1O75410 805 aa13.25□□□□□ -0.29
TRA2B-214ENST00000487615 PLEKHA8P1O95397 391 aa13.25□□□□□ -0.29
TRA2B-214ENST00000487615 PTPREP23469 700 aa13.25□□□□□ -0.29
TRA2B-214ENST00000487615 ANTXR2P58335 489 aa13.25□□□□□ -0.29
TRA2B-214ENST00000487615 RESP18Q5W5W9 173 aa13.25□□□□□ -0.29
TRA2B-214ENST00000487615 NEK8Q86SG6 692 aa13.25□□□□□ -0.29
TRA2B-214ENST00000487615 MARCH10Q8NA82 808 aaPredicted RBP13.25□□□□□ -0.29
TRA2B-214ENST00000487615 TSC1Q92574 1164 aa13.25□□□□□ -0.29
TRA2B-214ENST00000487615 BIN2Q9UBW5 565 aaPredicted RBP13.25□□□□□ -0.29
TRA2B-214ENST00000487615 COL5A2P05997 1499 aaPredicted RBP13.25□□□□□ -0.29
TRA2B-214ENST00000487615 KIF13AQ9H1H9 1805 aa13.25□□□□□ -0.29
TRA2B-214ENST00000487615 H0YIN7 160 aa13.25□□□□□ -0.29
TRA2B-214ENST00000487615 OR52Z1P0C646 297 aa13.25□□□□□ -0.29
TRA2B-214ENST00000487615 TUBB4BP68371 445 aa13.25□□□□□ -0.29
TRA2B-214ENST00000487615 TCP10Q12799 353 aa13.25□□□□□ -0.29
TRA2B-214ENST00000487615 ENAHQ8N8S7 591 aaPredicted RBP13.25□□□□□ -0.29
TRA2B-214ENST00000487615 TRAF5O00463 557 aa13.25□□□□□ -0.29
TRA2B-214ENST00000487615 CTDNEP1O95476 244 aa13.25□□□□□ -0.29
TRA2B-214ENST00000487615 PDE6BP35913 854 aa13.25□□□□□ -0.29
TRA2B-214ENST00000487615 FAM84BQ96KN1 310 aaPredicted RBP13.25□□□□□ -0.29
TRA2B-214ENST00000487615 PCDHA4Q9UN74 947 aa13.25□□□□□ -0.29
TRA2B-214ENST00000487615 TMTC3Q6ZXV5 915 aa13.24□□□□□ -0.29
TRA2B-214ENST00000487615 TRMT1LQ7Z2T5 733 aaKnown RBP13.24□□□□□ -0.29
TRA2B-214ENST00000487615 DGKHQ86XP1 1220 aa13.24□□□□□ -0.29
TRA2B-214ENST00000487615 RNF216Q9NWF9 866 aaPredicted RBP13.24□□□□□ -0.29
TRA2B-214ENST00000487615 PSDA5PKW4 1024 aaPredicted RBP13.24□□□□□ -0.29
TRA2B-214ENST00000487615 EVCP57679 992 aa13.24□□□□□ -0.29
TRA2B-214ENST00000487615 HAUS3Q68CZ6 603 aa13.24□□□□□ -0.29
TRA2B-214ENST00000487615 TMC4Q7Z404 712 aa13.24□□□□□ -0.29
TRA2B-214ENST00000487615 DYNLL2Q96FJ2 89 aa13.24□□□□□ -0.29
TRA2B-214ENST00000487615 MAN1B1Q9UKM7 699 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms