RNA–Protein interactions for RNA: ENST00000486828.6

PDLIM7-207, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-207ENST00000486828 LEMD3Q9Y2U8 911 aa20.54■□□□□ 0.88
PDLIM7-207ENST00000486828 SCG2P13521 617 aa20.53■□□□□ 0.88
PDLIM7-207ENST00000486828 RFC4P35249 363 aa20.53■□□□□ 0.88
PDLIM7-207ENST00000486828 E4F1Q66K89 784 aaPredicted RBP20.53■□□□□ 0.88
PDLIM7-207ENST00000486828 VSTM4Q8IW00 320 aa20.53■□□□□ 0.88
PDLIM7-207ENST00000486828 GRAMD1CQ8IYS0 662 aa20.53■□□□□ 0.88
PDLIM7-207ENST00000486828 CCDC34Q96HJ3 373 aa20.53■□□□□ 0.88
PDLIM7-207ENST00000486828 MKRN1Q9UHC7 482 aaKnown RBP20.53■□□□□ 0.88
PDLIM7-207ENST00000486828 PSDA5PKW4 1024 aaPredicted RBP20.53■□□□□ 0.88
PDLIM7-207ENST00000486828 KIF2AO00139 706 aaPredicted RBP20.53■□□□□ 0.88
PDLIM7-207ENST00000486828 LDHBP07195 334 aaKnown RBP20.53■□□□□ 0.88
PDLIM7-207ENST00000486828 USP17L8P0C7I0 530 aa20.53■□□□□ 0.88
PDLIM7-207ENST00000486828 SYCP1Q15431 976 aa20.53■□□□□ 0.88
PDLIM7-207ENST00000486828 PFKFB3Q16875 520 aaPredicted RBP20.53■□□□□ 0.88
PDLIM7-207ENST00000486828 TTC38Q5R3I4 469 aa20.53■□□□□ 0.88
PDLIM7-207ENST00000486828 C12orf60Q5U649 245 aa20.53■□□□□ 0.88
PDLIM7-207ENST00000486828 RCSD1Q6JBY9 416 aa20.53■□□□□ 0.88
PDLIM7-207ENST00000486828 ENOX1Q8TC92 643 aaKnown RBP20.53■□□□□ 0.88
PDLIM7-207ENST00000486828 ANKRD7Q92527 254 aa20.53■□□□□ 0.88
PDLIM7-207ENST00000486828 ZNF592Q92610 1267 aa20.53■□□□□ 0.88
PDLIM7-207ENST00000486828 ANKIB1Q9P2G1 1089 aa20.53■□□□□ 0.88
PDLIM7-207ENST00000486828 WNT7AO00755 349 aa20.52■□□□□ 0.88
PDLIM7-207ENST00000486828 GLIPR1L2Q4G1C9 344 aa20.52■□□□□ 0.88
PDLIM7-207ENST00000486828 TRAPPC3LQ5T215 181 aa20.52■□□□□ 0.88
PDLIM7-207ENST00000486828 ROBO3Q96MS0 1386 aa20.51■□□□□ 0.87
PDLIM7-207ENST00000486828 A0A087X0B3 334 aa20.51■□□□□ 0.87
PDLIM7-207ENST00000486828 SLFN14P0C7P3 912 aa20.51■□□□□ 0.87
PDLIM7-207ENST00000486828 KIF5BP33176 963 aa20.51■□□□□ 0.87
PDLIM7-207ENST00000486828 FMR1Q06787 632 aaKnown RBP eCLIP20.51■□□□□ 0.87
PDLIM7-207ENST00000486828 NOM1Q5C9Z4 860 aaKnown RBP20.51■□□□□ 0.87
PDLIM7-207ENST00000486828 DHX58Q96C10 678 aa20.51■□□□□ 0.87
PDLIM7-207ENST00000486828 EPSTI1Q96J88 318 aa20.51■□□□□ 0.87
PDLIM7-207ENST00000486828 ZNF18P17022 549 aa20.51■□□□□ 0.87
PDLIM7-207ENST00000486828 USP5P45974 858 aa20.51■□□□□ 0.87
PDLIM7-207ENST00000486828 NLRP5P59047 1200 aa20.51■□□□□ 0.87
PDLIM7-207ENST00000486828 GSTO1P78417 241 aa20.51■□□□□ 0.87
PDLIM7-207ENST00000486828 ATP2C1P98194 919 aaPredicted RBP20.51■□□□□ 0.87
PDLIM7-207ENST00000486828 NFIXQ14938 502 aa20.51■□□□□ 0.87
PDLIM7-207ENST00000486828 ZNF174Q15697 407 aa20.51■□□□□ 0.87
PDLIM7-207ENST00000486828 ZNF827Q17R98 1081 aa20.51■□□□□ 0.87
PDLIM7-207ENST00000486828 SH3RF1Q7Z6J0 888 aa20.51■□□□□ 0.87
PDLIM7-207ENST00000486828 DGKHQ86XP1 1220 aa20.51■□□□□ 0.87
PDLIM7-207ENST00000486828 SYMPKQ92797 1274 aaKnown RBP20.51■□□□□ 0.87
PDLIM7-207ENST00000486828 XDHP47989 1333 aa20.5■□□□□ 0.87
PDLIM7-207ENST00000486828 RGPD3A6NKT7 1758 aaPredicted RBP20.5■□□□□ 0.87
PDLIM7-207ENST00000486828 RGPD4Q7Z3J3 1758 aa20.5■□□□□ 0.87
PDLIM7-207ENST00000486828 TOP1P11387 765 aaKnown RBP20.5■□□□□ 0.87
PDLIM7-207ENST00000486828 BAG6P46379 1132 aa20.5■□□□□ 0.87
PDLIM7-207ENST00000486828 TRAPPC10P48553 1259 aa20.5■□□□□ 0.87
PDLIM7-207ENST00000486828 PLCD1P51178 756 aa20.5■□□□□ 0.87
PDLIM7-207ENST00000486828 EZH2Q15910 746 aaKnown RBP20.5■□□□□ 0.87
PDLIM7-207ENST00000486828 CNBD1Q8NA66 436 aa20.5■□□□□ 0.87
PDLIM7-207ENST00000486828 ANKS1AQ92625 1134 aa20.5■□□□□ 0.87
PDLIM7-207ENST00000486828 PPP1R13BQ96KQ4 1090 aa20.5■□□□□ 0.87
PDLIM7-207ENST00000486828 CAMKK2Q96RR4 588 aa20.5■□□□□ 0.87
PDLIM7-207ENST00000486828 KAT14Q9H8E8 782 aa20.5■□□□□ 0.87
PDLIM7-207ENST00000486828 NFE2L3Q9Y4A8 694 aa20.5■□□□□ 0.87
PDLIM7-207ENST00000486828 TMEM232C9JQI7 657 aa20.49■□□□□ 0.87
PDLIM7-207ENST00000486828 ERCC5P28715 1186 aaPredicted RBP20.49■□□□□ 0.87
PDLIM7-207ENST00000486828 TFAP4Q01664 338 aa20.49■□□□□ 0.87
PDLIM7-207ENST00000486828 CT47A1Q5JQC4 288 aaPredicted RBP20.49■□□□□ 0.87
PDLIM7-207ENST00000486828 C15orf52Q6ZUT6 534 aaKnown RBP20.49■□□□□ 0.87
PDLIM7-207ENST00000486828 ZNF804AQ7Z570 1209 aa20.49■□□□□ 0.87
PDLIM7-207ENST00000486828 SH3RF3Q8TEJ3 882 aaPredicted RBP20.49■□□□□ 0.87
PDLIM7-207ENST00000486828 TMX1Q9H3N1 280 aa20.49■□□□□ 0.87
PDLIM7-207ENST00000486828 INTS13Q9NVM9 706 aa20.49■□□□□ 0.87
PDLIM7-207ENST00000486828 KIF18AQ8NI77 898 aa20.49■□□□□ 0.87
PDLIM7-207ENST00000486828 PAGE5Q96GU1 130 aa20.49■□□□□ 0.87
PDLIM7-207ENST00000486828 IL17RBQ9NRM6 502 aa20.49■□□□□ 0.87
PDLIM7-207ENST00000486828 BAG3O95817 575 aa20.48■□□□□ 0.87
PDLIM7-207ENST00000486828 PPP4CP60510 307 aa20.48■□□□□ 0.87
PDLIM7-207ENST00000486828 NCBP1Q09161 790 aaKnown RBP20.48■□□□□ 0.87
PDLIM7-207ENST00000486828 PTGDRQ13258 359 aa20.48■□□□□ 0.87
PDLIM7-207ENST00000486828 SLC4A8Q2Y0W8 1093 aa20.48■□□□□ 0.87
PDLIM7-207ENST00000486828 CCDC178Q5BJE1 867 aa20.48■□□□□ 0.87
PDLIM7-207ENST00000486828 PIK3AP1Q6ZUJ8 805 aa20.48■□□□□ 0.87
PDLIM7-207ENST00000486828 SLC51AQ86UW1 340 aa20.48■□□□□ 0.87
PDLIM7-207ENST00000486828 TRMT44Q8IYL2 757 aaKnown RBP20.47■□□□□ 0.87
PDLIM7-207ENST00000486828 PNMA1Q8ND90 353 aa20.47■□□□□ 0.87
PDLIM7-207ENST00000486828 MED15Q96RN5 788 aa20.47■□□□□ 0.87
PDLIM7-207ENST00000486828 SH3GLB2Q9NR46 395 aa20.47■□□□□ 0.87
PDLIM7-207ENST00000486828 VWA3AA6NCI4 1184 aa20.47■□□□□ 0.87
PDLIM7-207ENST00000486828 CCP110O43303 1012 aa20.47■□□□□ 0.87
PDLIM7-207ENST00000486828 VEGFAP15692 232 aaPredicted RBP20.47■□□□□ 0.87
PDLIM7-207ENST00000486828 CALML3P27482 149 aa20.47■□□□□ 0.87
PDLIM7-207ENST00000486828 AMOTL1Q8IY63 956 aa20.47■□□□□ 0.87
PDLIM7-207ENST00000486828 DYNLL2Q96FJ2 89 aa20.47■□□□□ 0.87
PDLIM7-207ENST00000486828 CCDC94Q9BW85 323 aaPredicted RBP20.47■□□□□ 0.87
PDLIM7-207ENST00000486828 NAV1Q8NEY1 1877 aa20.46■□□□□ 0.87
PDLIM7-207ENST00000486828 TUBB4AP04350 444 aa20.46■□□□□ 0.87
PDLIM7-207ENST00000486828 LDHCP07864 332 aa20.46■□□□□ 0.87
PDLIM7-207ENST00000486828 CDK11BP21127 795 aaKnown RBP20.46■□□□□ 0.87
PDLIM7-207ENST00000486828 HMGB2P26583 209 aaKnown RBP20.46■□□□□ 0.87
PDLIM7-207ENST00000486828 AFMP43652 599 aa20.46■□□□□ 0.87
PDLIM7-207ENST00000486828 DPYDQ12882 1025 aa20.46■□□□□ 0.87
PDLIM7-207ENST00000486828 TBX2Q13207 712 aaPredicted RBP20.46■□□□□ 0.87
PDLIM7-207ENST00000486828 GRM4Q14833 912 aa20.46■□□□□ 0.87
PDLIM7-207ENST00000486828 DIXDC1Q155Q3 683 aa20.46■□□□□ 0.87
PDLIM7-207ENST00000486828 GSDMAQ96QA5 445 aa20.46■□□□□ 0.87
PDLIM7-207ENST00000486828 MKNK2Q9HBH9 465 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms