RNA–Protein interactions for RNA: ENST00000486741.5

HMGN1-216, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 4,299 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-216ENST00000486741 ALDH8A1Q9H2A2 487 aaPredicted RBP14.92□□□□□ -0.02
HMGN1-216ENST00000486741 FOXP1Q9H334 677 aaPredicted RBP14.92□□□□□ -0.02
HMGN1-216ENST00000486741 GUCA1BQ9UMX6 200 aa14.92□□□□□ -0.02
HMGN1-216ENST00000486741 RUFY1Q96T51 708 aa14.92□□□□□ -0.02
HMGN1-216ENST00000486741 LRWD1Q9UFC0 647 aa14.92□□□□□ -0.02
HMGN1-216ENST00000486741 SLC16A2P36021 539 aa14.92□□□□□ -0.02
HMGN1-216ENST00000486741 AFF2P51816 1311 aa14.91□□□□□ -0.02
HMGN1-216ENST00000486741 FAM205CA6NFA0 338 aa14.91□□□□□ -0.02
HMGN1-216ENST00000486741 AKR1B15C9JRZ8 316 aaPredicted RBP14.91□□□□□ -0.02
HMGN1-216ENST00000486741 WDHD1O75717 1129 aaPredicted RBP14.91□□□□□ -0.02
HMGN1-216ENST00000486741 CCDC175P0C221 793 aa14.91□□□□□ -0.02
HMGN1-216ENST00000486741 MRPL12P52815 198 aaKnown RBP14.91□□□□□ -0.02
HMGN1-216ENST00000486741 RBM6P78332 1123 aaKnown RBP14.91□□□□□ -0.02
HMGN1-216ENST00000486741 CTR9Q6PD62 1173 aa14.91□□□□□ -0.02
HMGN1-216ENST00000486741 PDLIM2Q96JY6 352 aa14.91□□□□□ -0.02
HMGN1-216ENST00000486741 PUF60Q9UHX1 559 aaKnown RBP14.91□□□□□ -0.02
HMGN1-216ENST00000486741 FAM170AA1A519 330 aa14.91□□□□□ -0.02
HMGN1-216ENST00000486741 FOXN1O15353 648 aa14.91□□□□□ -0.02
HMGN1-216ENST00000486741 SLU7O95391 586 aaKnown RBP14.91□□□□□ -0.02
HMGN1-216ENST00000486741 TMEM132AQ24JP5 1023 aa14.91□□□□□ -0.02
HMGN1-216ENST00000486741 IGDCC4Q8TDY8 1250 aa14.91□□□□□ -0.02
HMGN1-216ENST00000486741 TEKT1Q969V4 418 aa14.91□□□□□ -0.02
HMGN1-216ENST00000486741 SEMA3EO15041 775 aa14.91□□□□□ -0.02
HMGN1-216ENST00000486741 PPP6R2O75170 966 aa14.91□□□□□ -0.02
HMGN1-216ENST00000486741 COL5A2P05997 1499 aaPredicted RBP14.91□□□□□ -0.02
HMGN1-216ENST00000486741 HMGB2P26583 209 aaKnown RBP14.91□□□□□ -0.02
HMGN1-216ENST00000486741 KRT27Q7Z3Y8 459 aa14.91□□□□□ -0.02
HMGN1-216ENST00000486741 FMR1NBQ8N0W7 255 aaPredicted RBP14.91□□□□□ -0.02
HMGN1-216ENST00000486741 KCNB2Q92953 911 aa14.91□□□□□ -0.02
HMGN1-216ENST00000486741 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.91□□□□□ -0.021e-14■■■□□ 15.4
HMGN1-216ENST00000486741 ERICH4A6NGS2 130 aa14.9□□□□□ -0.02
HMGN1-216ENST00000486741 CHMP2AO43633 222 aa14.9□□□□□ -0.02
HMGN1-216ENST00000486741 DDAH1O94760 285 aa14.9□□□□□ -0.02
HMGN1-216ENST00000486741 PAK1Q13153 545 aa14.9□□□□□ -0.02
HMGN1-216ENST00000486741 PLS1Q14651 629 aa14.9□□□□□ -0.02
HMGN1-216ENST00000486741 ZNF569Q5MCW4 686 aa14.9□□□□□ -0.02
HMGN1-216ENST00000486741 CSGALNACT2Q8N6G5 542 aa14.9□□□□□ -0.02
HMGN1-216ENST00000486741 SNX29Q8TEQ0 813 aa14.9□□□□□ -0.02
HMGN1-216ENST00000486741 JADE2Q9NQC1 790 aa14.9□□□□□ -0.02
HMGN1-216ENST00000486741 ZBTB21Q9ULJ3 1066 aa14.9□□□□□ -0.02
HMGN1-216ENST00000486741 BAZ2BQ9UIF8 2168 aaKnown RBP14.9□□□□□ -0.02
HMGN1-216ENST00000486741 WDR78Q5VTH9 848 aa14.9□□□□□ -0.02
HMGN1-216ENST00000486741 C3orf67Q6ZVT6 689 aa14.9□□□□□ -0.02
HMGN1-216ENST00000486741 CABP7Q86V35 215 aa14.9□□□□□ -0.02
HMGN1-216ENST00000486741 FAM196BA6NMK8 535 aa14.9□□□□□ -0.02
HMGN1-216ENST00000486741 FGFR1OPO95684 399 aaKnown RBP14.9□□□□□ -0.02
HMGN1-216ENST00000486741 ADCY7P51828 1080 aa14.9□□□□□ -0.02
HMGN1-216ENST00000486741 TBC1D8BQ0IIM8 1120 aa14.9□□□□□ -0.02
HMGN1-216ENST00000486741 SV2BQ7L1I2 683 aa14.9□□□□□ -0.02
HMGN1-216ENST00000486741 NELFBQ8WX92 580 aa14.9□□□□□ -0.02
HMGN1-216ENST00000486741 CCDC102AQ96A19 550 aa14.9□□□□□ -0.02
HMGN1-216ENST00000486741 MRFAP1L1Q96HT8 127 aa14.9□□□□□ -0.02
HMGN1-216ENST00000486741 PLCD1P51178 756 aa14.89□□□□□ -0.03
HMGN1-216ENST00000486741 SYCP1Q15431 976 aa14.89□□□□□ -0.03
HMGN1-216ENST00000486741 C2CD5Q86YS7 1000 aa14.89□□□□□ -0.03
HMGN1-216ENST00000486741 LARGE2Q8N3Y3 721 aa14.89□□□□□ -0.03
HMGN1-216ENST00000486741 COA7Q96BR5 231 aa14.89□□□□□ -0.03
HMGN1-216ENST00000486741 HPS5Q9UPZ3 1129 aa14.89□□□□□ -0.03
HMGN1-216ENST00000486741 PPEF1O14829 653 aaPredicted RBP14.89□□□□□ -0.03
HMGN1-216ENST00000486741 PPIP5K2O43314 1243 aa14.89□□□□□ -0.03
HMGN1-216ENST00000486741 MYRIPQ8NFW9 859 aa14.89□□□□□ -0.03
HMGN1-216ENST00000486741 KIAA1524Q8TCG1 905 aa14.89□□□□□ -0.03
HMGN1-216ENST00000486741 LUC7LQ9NQ29 371 aaKnown RBP14.89□□□□□ -0.03
HMGN1-216ENST00000486741 HDAC9Q9UKV0 1011 aa14.89□□□□□ -0.03
HMGN1-216ENST00000486741 LUC7L2Q9Y383 392 aaKnown RBP14.89□□□□□ -0.03
HMGN1-216ENST00000486741 AXDND1Q5T1B0 1012 aaPredicted RBP14.89□□□□□ -0.03
HMGN1-216ENST00000486741 FAM114A1Q8IWE2 563 aa14.89□□□□□ -0.03
HMGN1-216ENST00000486741 SPICE1Q8N0Z3 855 aa14.89□□□□□ -0.03
HMGN1-216ENST00000486741 CALCRLQ16602 461 aa14.89□□□□□ -0.03
HMGN1-216ENST00000486741 KCTD1Q719H9 257 aa14.89□□□□□ -0.03
HMGN1-216ENST00000486741 SAMSN1Q9NSI8 373 aaKnown RBP14.89□□□□□ -0.03
HMGN1-216ENST00000486741 CGNQ9P2M7 1197 aaKnown RBP14.89□□□□□ -0.03
HMGN1-216ENST00000486741 TBCAO75347 108 aaKnown RBP14.88□□□□□ -0.03
HMGN1-216ENST00000486741 MMP10P09238 476 aa14.88□□□□□ -0.03
HMGN1-216ENST00000486741 ALDH1B1P30837 517 aa14.88□□□□□ -0.03
HMGN1-216ENST00000486741 USP8P40818 1118 aa14.88□□□□□ -0.03
HMGN1-216ENST00000486741 ALX1Q15699 326 aa14.88□□□□□ -0.03
HMGN1-216ENST00000486741 PTF1AQ7RTS3 328 aa14.88□□□□□ -0.03
HMGN1-216ENST00000486741 KRT25Q7Z3Z0 450 aa14.88□□□□□ -0.03
HMGN1-216ENST00000486741 PIGSQ96S52 555 aa14.88□□□□□ -0.03
HMGN1-216ENST00000486741 SRRTQ9BXP5 876 aaKnown RBP14.88□□□□□ -0.03
HMGN1-216ENST00000486741 CD209Q9NNX6 404 aa14.88□□□□□ -0.03
HMGN1-216ENST00000486741 TRAF5O00463 557 aa14.88□□□□□ -0.03
HMGN1-216ENST00000486741 KRT9P35527 623 aa14.88□□□□□ -0.03
HMGN1-216ENST00000486741 NSUN4Q96CB9 384 aaKnown RBP14.88□□□□□ -0.03
HMGN1-216ENST00000486741 BRIP1Q9BX63 1249 aa14.88□□□□□ -0.03
HMGN1-216ENST00000486741 SPATA31A5Q5VU36 1347 aa14.88□□□□□ -0.03
HMGN1-216ENST00000486741 SPATA31A7Q8IWB4 1347 aa14.88□□□□□ -0.03
HMGN1-216ENST00000486741 SP4Q02446 784 aa14.88□□□□□ -0.03
HMGN1-216ENST00000486741 CCDC144BQ3MJ40 725 aa14.88□□□□□ -0.03
HMGN1-216ENST00000486741 LRP10Q7Z4F1 713 aa14.88□□□□□ -0.03
HMGN1-216ENST00000486741 GOLGA6L9A6NEM1 432 aa14.87□□□□□ -0.03
HMGN1-216ENST00000486741 TCP10L2B9ZVM9 353 aa14.87□□□□□ -0.03
HMGN1-216ENST00000486741 BBOX1O75936 387 aa14.87□□□□□ -0.03
HMGN1-216ENST00000486741 SPECC1LQ69YQ0 1117 aa14.87□□□□□ -0.03
HMGN1-216ENST00000486741 SHC4Q6S5L8 630 aa14.87□□□□□ -0.03
HMGN1-216ENST00000486741 NELFCDQ8IXH7 590 aa14.87□□□□□ -0.03
HMGN1-216ENST00000486741 SYCP3Q8IZU3 236 aa14.87□□□□□ -0.03
HMGN1-216ENST00000486741 GJD4Q96KN9 370 aaPredicted RBP14.87□□□□□ -0.03
HMGN1-216ENST00000486741 MAN1B1Q9UKM7 699 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms