RNA–Protein interactions for RNA: ENST00000486641.2

CCDC171-208, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 2,322 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-208ENST00000486641 FOXO4P98177 505 aa11.96□□□□□ -0.49
CCDC171-208ENST00000486641 SSRP1Q08945 709 aaKnown RBP11.96□□□□□ -0.49
CCDC171-208ENST00000486641 NEDD9Q14511 834 aa11.96□□□□□ -0.49
CCDC171-208ENST00000486641 TSEN2Q8NCE0 465 aaKnown RBP11.96□□□□□ -0.49
CCDC171-208ENST00000486641 EPSTI1Q96J88 318 aa11.96□□□□□ -0.49
CCDC171-208ENST00000486641 CARD10Q9BWT7 1032 aa11.96□□□□□ -0.49
CCDC171-208ENST00000486641 ESF1Q9H501 851 aaKnown RBP11.96□□□□□ -0.49
CCDC171-208ENST00000486641 AMOTL2Q9Y2J4 779 aa11.96□□□□□ -0.49
CCDC171-208ENST00000486641 TMEM2Q9UHN6 1383 aa11.96□□□□□ -0.49
CCDC171-208ENST00000486641 MYO5AQ9Y4I1 1855 aaKnown RBP11.96□□□□□ -0.5
CCDC171-208ENST00000486641 EPB41P11171 864 aaKnown RBP11.95□□□□□ -0.5
CCDC171-208ENST00000486641 LTKP29376 864 aa11.95□□□□□ -0.5
CCDC171-208ENST00000486641 ELF1P32519 619 aa11.95□□□□□ -0.5
CCDC171-208ENST00000486641 RDXP35241 583 aaKnown RBP11.95□□□□□ -0.5
CCDC171-208ENST00000486641 ATP1A2P50993 1020 aa11.95□□□□□ -0.5
CCDC171-208ENST00000486641 MRPS25P82663 173 aaKnown RBP11.95□□□□□ -0.5
CCDC171-208ENST00000486641 TRIM14Q14142 442 aa11.95□□□□□ -0.5
CCDC171-208ENST00000486641 RILPL1Q5EBL4 403 aa11.95□□□□□ -0.5
CCDC171-208ENST00000486641 SH3RF1Q7Z6J0 888 aa11.95□□□□□ -0.5
CCDC171-208ENST00000486641 TBC1D10CQ8IV04 446 aa11.95□□□□□ -0.5
CCDC171-208ENST00000486641 AIDAQ96BJ3 306 aa11.95□□□□□ -0.5
CCDC171-208ENST00000486641 MIEF2Q96C03 454 aa11.95□□□□□ -0.5
CCDC171-208ENST00000486641 LRRC1Q9BTT6 524 aa11.95□□□□□ -0.5
CCDC171-208ENST00000486641 KLC4Q9NSK0 619 aa11.95□□□□□ -0.5
CCDC171-208ENST00000486641 DMGDHQ9UI17 866 aaKnown RBP11.95□□□□□ -0.5
CCDC171-208ENST00000486641 AFDNP55196 1824 aaKnown RBP11.95□□□□□ -0.5
CCDC171-208ENST00000486641 TTC26A0AVF1 554 aa11.95□□□□□ -0.5
CCDC171-208ENST00000486641 RCCD1A6NED2 376 aa11.95□□□□□ -0.5
CCDC171-208ENST00000486641 GOLGA8AA7E2F4 631 aa11.95□□□□□ -0.5
CCDC171-208ENST00000486641 ZEB2O60315 1214 aa11.95□□□□□ -0.5
CCDC171-208ENST00000486641 NR5A1Q13285 461 aa11.95□□□□□ -0.5
CCDC171-208ENST00000486641 PREPLQ4J6C6 727 aaPredicted RBP11.95□□□□□ -0.5
CCDC171-208ENST00000486641 NFXL1Q6ZNB6 911 aa11.95□□□□□ -0.5
CCDC171-208ENST00000486641 SPATS2Q86XZ4 545 aaKnown RBP11.95□□□□□ -0.5
CCDC171-208ENST00000486641 SH2D3CQ8N5H7 860 aa11.95□□□□□ -0.5
CCDC171-208ENST00000486641 IGDCC4Q8TDY8 1250 aa11.95□□□□□ -0.5
CCDC171-208ENST00000486641 ZNF594Q96JF6 807 aaPredicted RBP11.95□□□□□ -0.5
CCDC171-208ENST00000486641 POLD4Q9HCU8 107 aa11.95□□□□□ -0.5
CCDC171-208ENST00000486641 STRN4Q9NRL3 753 aa11.95□□□□□ -0.5
CCDC171-208ENST00000486641 A6NNZ2 444 aa11.94□□□□□ -0.5
CCDC171-208ENST00000486641 B4E1Z4 1266 aa11.94□□□□□ -0.5
CCDC171-208ENST00000486641 GPAA1O43292 621 aa11.94□□□□□ -0.5
CCDC171-208ENST00000486641 IL15P40933 162 aaPredicted RBP11.94□□□□□ -0.5
CCDC171-208ENST00000486641 NAP1L1P55209 391 aaKnown RBP11.94□□□□□ -0.5
CCDC171-208ENST00000486641 SLC7A5Q01650 507 aa11.94□□□□□ -0.5
CCDC171-208ENST00000486641 SATB1Q01826 763 aa11.94□□□□□ -0.5
CCDC171-208ENST00000486641 UBXN1Q04323 297 aa11.94□□□□□ -0.5
CCDC171-208ENST00000486641 TTF1Q15361 905 aaPredicted RBP11.94□□□□□ -0.5
CCDC171-208ENST00000486641 SAFBQ15424 915 aaKnown RBP eCLIP11.94□□□□□ -0.5
CCDC171-208ENST00000486641 TUBB8Q3ZCM7 444 aa11.94□□□□□ -0.5
CCDC171-208ENST00000486641 TCP11X2Q5H9J9 407 aa11.94□□□□□ -0.5
CCDC171-208ENST00000486641 KCTD16Q68DU8 428 aa11.94□□□□□ -0.5
CCDC171-208ENST00000486641 WDR59Q6PJI9 974 aa11.94□□□□□ -0.5
CCDC171-208ENST00000486641 LRP10Q7Z4F1 713 aa11.94□□□□□ -0.5
CCDC171-208ENST00000486641 OR8K1Q8NGG5 319 aa11.94□□□□□ -0.5
CCDC171-208ENST00000486641 STAMQ92783 540 aa11.94□□□□□ -0.5
CCDC171-208ENST00000486641 GSDMAQ96QA5 445 aa11.94□□□□□ -0.5
CCDC171-208ENST00000486641 LACRTQ9GZZ8 138 aa11.94□□□□□ -0.5
CCDC171-208ENST00000486641 JADE2Q9NQC1 790 aa11.94□□□□□ -0.5
CCDC171-208ENST00000486641 DUSP10Q9Y6W6 482 aa11.94□□□□□ -0.5
CCDC171-208ENST00000486641 PLEKHG1Q9ULL1 1385 aa11.94□□□□□ -0.5
CCDC171-208ENST00000486641 FMNL1O95466 1100 aaPredicted RBP11.94□□□□□ -0.5
CCDC171-208ENST00000486641 ZFYP08048 801 aaPredicted RBP11.94□□□□□ -0.5
CCDC171-208ENST00000486641 ATP2B2Q01814 1243 aa11.94□□□□□ -0.5
CCDC171-208ENST00000486641 FAM69CQ0P6D2 419 aa11.94□□□□□ -0.5
CCDC171-208ENST00000486641 RNF187Q5TA31 235 aaPredicted RBP11.94□□□□□ -0.5
CCDC171-208ENST00000486641 NAA35Q5VZE5 725 aa11.94□□□□□ -0.5
CCDC171-208ENST00000486641 ZNF790Q6PG37 636 aa11.94□□□□□ -0.5
CCDC171-208ENST00000486641 YTHDF3Q7Z739 585 aaKnown RBP11.94□□□□□ -0.5
CCDC171-208ENST00000486641 KIAA1328Q86T90 577 aa11.94□□□□□ -0.5
CCDC171-208ENST00000486641 MMGT1Q8N4V1 131 aa11.94□□□□□ -0.5
CCDC171-208ENST00000486641 APPBP2Q92624 585 aa11.94□□□□□ -0.5
CCDC171-208ENST00000486641 N4BP2L2Q92802 583 aaPredicted RBP11.94□□□□□ -0.5
CCDC171-208ENST00000486641 KCNJ18B7U540 433 aa11.93□□□□□ -0.5
CCDC171-208ENST00000486641 RASSF9O75901 435 aa11.93□□□□□ -0.5
CCDC171-208ENST00000486641 IDEP14735 1019 aa11.93□□□□□ -0.5
CCDC171-208ENST00000486641 SMTNP53814 917 aa11.93□□□□□ -0.5
CCDC171-208ENST00000486641 PPARAQ07869 468 aa11.93□□□□□ -0.5
CCDC171-208ENST00000486641 ACTN3Q08043 901 aaPredicted RBP11.93□□□□□ -0.5
CCDC171-208ENST00000486641 KCNJ12Q14500 433 aa11.93□□□□□ -0.5
CCDC171-208ENST00000486641 WLSQ5T9L3 541 aa11.93□□□□□ -0.5
CCDC171-208ENST00000486641 ALS2CLQ60I27 953 aa11.93□□□□□ -0.5
CCDC171-208ENST00000486641 CCDC70Q6NSX1 233 aa11.93□□□□□ -0.5
CCDC171-208ENST00000486641 OXER1Q8TDS5 423 aa11.93□□□□□ -0.5
CCDC171-208ENST00000486641 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.93□□□□□ -0.5
CCDC171-208ENST00000486641 RNPC3Q96LT9 517 aaKnown RBP11.93□□□□□ -0.5
CCDC171-208ENST00000486641 EPN3Q9H201 632 aa11.93□□□□□ -0.5
CCDC171-208ENST00000486641 FOXP1Q9H334 677 aaPredicted RBP11.93□□□□□ -0.5
CCDC171-208ENST00000486641 VCPKMTQ9H867 229 aa11.93□□□□□ -0.5
CCDC171-208ENST00000486641 LY9Q9HBG7 655 aa11.93□□□□□ -0.5
CCDC171-208ENST00000486641 CABP5Q9NP86 173 aa11.93□□□□□ -0.5
CCDC171-208ENST00000486641 INCENPQ9NQS7 918 aa11.93□□□□□ -0.5
CCDC171-208ENST00000486641 C5P01031 1676 aa11.93□□□□□ -0.5
CCDC171-208ENST00000486641 KRT86O43790 486 aa11.93□□□□□ -0.5
CCDC171-208ENST00000486641 HSF2BPO75031 334 aa11.93□□□□□ -0.5
CCDC171-208ENST00000486641 IBSPP21815 317 aaPredicted RBP11.93□□□□□ -0.5
CCDC171-208ENST00000486641 LSP1P33241 339 aa11.93□□□□□ -0.5
CCDC171-208ENST00000486641 NF2P35240 595 aa11.93□□□□□ -0.5
CCDC171-208ENST00000486641 GUCY1A3Q02108 690 aa11.93□□□□□ -0.5
CCDC171-208ENST00000486641 NNTQ13423 1086 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms