RNA–Protein interactions for RNA: ENST00000486260.5

THBS3-207, Transcript of thrombospondin 3, humanhuman

TSL 5

Gene THBS3, Length 1,763 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-207ENST00000486260 TMX3Q96JJ7 454 aa19.34■□□□□ 0.69
THBS3-207ENST00000486260 K7ELQ4 463 aaPredicted RBP19.33■□□□□ 0.68
THBS3-207ENST00000486260 ZBTB43O43298 467 aa19.33■□□□□ 0.68
THBS3-207ENST00000486260 TROAPQ12815 778 aa19.33■□□□□ 0.68
THBS3-207ENST00000486260 MICU3Q86XE3 530 aa19.33■□□□□ 0.68
THBS3-207ENST00000486260 NUP133Q8WUM0 1156 aa19.33■□□□□ 0.68
THBS3-207ENST00000486260 CNKSR2Q8WXI2 1034 aa19.33■□□□□ 0.68
THBS3-207ENST00000486260 ZSCAN31Q96LW9 406 aaPredicted RBP19.33■□□□□ 0.68
THBS3-207ENST00000486260 HPS5Q9UPZ3 1129 aa19.33■□□□□ 0.68
THBS3-207ENST00000486260 TMX2Q9Y320 296 aa19.33■□□□□ 0.68
THBS3-207ENST00000486260 SPP2Q13103 211 aa19.32■□□□□ 0.68
THBS3-207ENST00000486260 CCDC144CPQ8IYA2 1237 aa19.32■□□□□ 0.68
THBS3-207ENST00000486260 NECAB1Q8N987 351 aa19.32■□□□□ 0.68
THBS3-207ENST00000486260 WDR18Q9BV38 432 aa19.32■□□□□ 0.68
THBS3-207ENST00000486260 RAD21O60216 631 aa19.32■□□□□ 0.68
THBS3-207ENST00000486260 CCT2P78371 535 aaKnown RBP19.32■□□□□ 0.68
THBS3-207ENST00000486260 FSTL1Q12841 308 aa19.32■□□□□ 0.68
THBS3-207ENST00000486260 RASGRP2Q7LDG7 609 aa19.32■□□□□ 0.68
THBS3-207ENST00000486260 ZNF280CQ8ND82 737 aa19.32■□□□□ 0.68
THBS3-207ENST00000486260 SLKQ9H2G2 1235 aaPredicted RBP19.32■□□□□ 0.68
THBS3-207ENST00000486260 AS3MTQ9HBK9 375 aa19.32■□□□□ 0.68
THBS3-207ENST00000486260 PHIPQ8WWQ0 1821 aa19.31■□□□□ 0.68
THBS3-207ENST00000486260 UNCXA6NJT0 531 aa19.31■□□□□ 0.68
THBS3-207ENST00000486260 PFKFB2O60825 505 aa19.31■□□□□ 0.68
THBS3-207ENST00000486260 DDAH1O94760 285 aa19.31■□□□□ 0.68
THBS3-207ENST00000486260 BECN1Q14457 450 aa19.31■□□□□ 0.68
THBS3-207ENST00000486260 ZYXQ15942 572 aaKnown RBP19.31■□□□□ 0.68
THBS3-207ENST00000486260 ERO1BQ86YB8 467 aa19.31■□□□□ 0.68
THBS3-207ENST00000486260 SLC10A4Q96EP9 437 aa19.31■□□□□ 0.68
THBS3-207ENST00000486260 FEZ1Q99689 392 aa19.31■□□□□ 0.68
THBS3-207ENST00000486260 NCOA5Q9HCD5 579 aaKnown RBP19.31■□□□□ 0.68
THBS3-207ENST00000486260 SH2B1Q9NRF2 756 aaPredicted RBP19.31■□□□□ 0.68
THBS3-207ENST00000486260 AFG3L2Q9Y4W6 797 aa19.31■□□□□ 0.68
THBS3-207ENST00000486260 SPDYE5A6NIY4 337 aa19.3■□□□□ 0.68
THBS3-207ENST00000486260 TRIM75PA6NK02 468 aa19.3■□□□□ 0.68
THBS3-207ENST00000486260 GOLGA8AA7E2F4 631 aa19.3■□□□□ 0.68
THBS3-207ENST00000486260 F5H6K3 240 aa19.3■□□□□ 0.68
THBS3-207ENST00000486260 METAP2P50579 478 aaKnown RBP eCLIP19.3■□□□□ 0.68
THBS3-207ENST00000486260 KLRC3Q07444 240 aa19.3■□□□□ 0.68
THBS3-207ENST00000486260 SCRN1Q12765 414 aa19.3■□□□□ 0.68
THBS3-207ENST00000486260 FANCBQ8NB91 859 aa19.3■□□□□ 0.68
THBS3-207ENST00000486260 OTUD5Q96G74 571 aa19.3■□□□□ 0.68
THBS3-207ENST00000486260 SH2D4AQ9H788 454 aa19.3■□□□□ 0.68
THBS3-207ENST00000486260 USP17L10C9JJH3 530 aa19.29■□□□□ 0.68
THBS3-207ENST00000486260 CALM1P0DP23 149 aa19.29■□□□□ 0.68
THBS3-207ENST00000486260 CALM2P0DP24 149 aa19.29■□□□□ 0.68
THBS3-207ENST00000486260 CALM3P0DP25 149 aa19.29■□□□□ 0.68
THBS3-207ENST00000486260 HUNKP57058 714 aa19.29■□□□□ 0.68
THBS3-207ENST00000486260 PPATQ06203 517 aa19.29■□□□□ 0.68
THBS3-207ENST00000486260 ST3GAL1Q11201 340 aa19.29■□□□□ 0.68
THBS3-207ENST00000486260 MTMR2Q13614 643 aa19.29■□□□□ 0.68
THBS3-207ENST00000486260 KIAA1755Q5JYT7 1200 aa19.29■□□□□ 0.68
THBS3-207ENST00000486260 SLFN13Q68D06 897 aa19.29■□□□□ 0.68
THBS3-207ENST00000486260 GMCL1P1Q8NEA9 526 aa19.29■□□□□ 0.68
THBS3-207ENST00000486260 OPTNQ96CV9 577 aa19.29■□□□□ 0.68
THBS3-207ENST00000486260 KIAA1683Q9H0B3 1180 aa19.29■□□□□ 0.68
THBS3-207ENST00000486260 SYNPO2Q9UMS6 1093 aa19.29■□□□□ 0.68
THBS3-207ENST00000486260 NDUFB10O96000 172 aa19.29■□□□□ 0.68
THBS3-207ENST00000486260 PDHBP11177 359 aa19.29■□□□□ 0.68
THBS3-207ENST00000486260 CDC27P30260 824 aa19.29■□□□□ 0.68
THBS3-207ENST00000486260 RCAN1P53805 252 aa19.29■□□□□ 0.68
THBS3-207ENST00000486260 DGKZQ13574 1117 aa19.29■□□□□ 0.68
THBS3-207ENST00000486260 RTN1Q16799 776 aa19.29■□□□□ 0.68
THBS3-207ENST00000486260 USP17L2Q6R6M4 530 aa19.29■□□□□ 0.68
THBS3-207ENST00000486260 CCDC83Q8IWF9 413 aa19.29■□□□□ 0.68
THBS3-207ENST00000486260 SPICE1Q8N0Z3 855 aa19.29■□□□□ 0.68
THBS3-207ENST00000486260 GTF3C6Q969F1 213 aa19.29■□□□□ 0.68
THBS3-207ENST00000486260 VCPKMTQ9H867 229 aa19.29■□□□□ 0.68
THBS3-207ENST00000486260 GOPCQ9HD26 462 aa19.29■□□□□ 0.68
THBS3-207ENST00000486260 FAM217BQ9NTX9 383 aaPredicted RBP19.29■□□□□ 0.68
THBS3-207ENST00000486260 ADD1P35611 737 aaKnown RBP19.28■□□□□ 0.68
THBS3-207ENST00000486260 BACE1P56817 501 aa19.28■□□□□ 0.68
THBS3-207ENST00000486260 GRM4Q14833 912 aa19.28■□□□□ 0.68
THBS3-207ENST00000486260 IRF6O14896 467 aa19.27■□□□□ 0.68
THBS3-207ENST00000486260 GOLGA8HP0CJ92 632 aa19.27■□□□□ 0.68
THBS3-207ENST00000486260 SNHG28P0DPA3 235 aa19.27■□□□□ 0.68
THBS3-207ENST00000486260 GJA5P36382 358 aa19.27■□□□□ 0.68
THBS3-207ENST00000486260 SLC4A3P48751 1232 aa19.27■□□□□ 0.68
THBS3-207ENST00000486260 SAPCD2Q86UD0 394 aa19.27■□□□□ 0.68
THBS3-207ENST00000486260 STAG2Q8N3U4 1231 aa19.27■□□□□ 0.68
THBS3-207ENST00000486260 CTCFLQ8NI51 663 aaPredicted RBP19.27■□□□□ 0.68
THBS3-207ENST00000486260 MAP3K14Q99558 947 aa19.27■□□□□ 0.68
THBS3-207ENST00000486260 MAD2L2Q9UI95 211 aa19.27■□□□□ 0.68
THBS3-207ENST00000486260 NID2Q14112 1375 aa19.27■□□□□ 0.68
THBS3-207ENST00000486260 TMEM88BA6NKF7 163 aa19.27■□□□□ 0.67
THBS3-207ENST00000486260 DTNBO60941 627 aa19.27■□□□□ 0.67
THBS3-207ENST00000486260 PARP1P09874 1014 aaKnown RBP19.27■□□□□ 0.67
THBS3-207ENST00000486260 PPIL2Q13356 520 aa19.27■□□□□ 0.67
THBS3-207ENST00000486260 NUP88Q99567 741 aaPredicted RBP19.27■□□□□ 0.67
THBS3-207ENST00000486260 EMILIN3Q9NT22 766 aa19.27■□□□□ 0.67
THBS3-207ENST00000486260 FRMPD2Q68DX3 1309 aaPredicted RBP19.26■□□□□ 0.67
THBS3-207ENST00000486260 KIF5BP33176 963 aa19.26■□□□□ 0.67
THBS3-207ENST00000486260 SLC1A4P43007 532 aa19.26■□□□□ 0.67
THBS3-207ENST00000486260 USP14P54578 494 aa19.26■□□□□ 0.67
THBS3-207ENST00000486260 HMGCS2P54868 508 aa19.26■□□□□ 0.67
THBS3-207ENST00000486260 CUL4AQ13619 759 aa19.26■□□□□ 0.67
THBS3-207ENST00000486260 CCDC96Q2M329 555 aa19.26■□□□□ 0.67
THBS3-207ENST00000486260 KCTD1Q719H9 257 aa19.26■□□□□ 0.67
THBS3-207ENST00000486260 CMTR1Q8N1G2 835 aaKnown RBP19.26■□□□□ 0.67
THBS3-207ENST00000486260 DCAF4Q8WV16 495 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms