RNA–Protein interactions for RNA: ENST00000486037.1

SND1-213, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 695 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-213ENST00000486037 USP44Q9H0E7 712 aa12.1□□□□□ -0.47
SND1-213ENST00000486037 IVNS1ABPQ9Y6Y0 642 aa12.1□□□□□ -0.47
SND1-213ENST00000486037 USP34Q70CQ2 3546 aa12.1□□□□□ -0.47
SND1-213ENST00000486037 LRRC37A2A6NM11 1700 aa12.09□□□□□ -0.47
SND1-213ENST00000486037 PRRC2BQ5JSZ5 2229 aaKnown RBP12.09□□□□□ -0.47
SND1-213ENST00000486037 GPR37L1O60883 481 aa12.09□□□□□ -0.47
SND1-213ENST00000486037 TIMP1P01033 207 aa12.09□□□□□ -0.47
SND1-213ENST00000486037 TBC1D9Q6ZT07 1266 aa12.09□□□□□ -0.47
SND1-213ENST00000486037 ZNF365Q70YC5 407 aa12.09□□□□□ -0.47
SND1-213ENST00000486037 DPP9Q86TI2 863 aa12.09□□□□□ -0.47
SND1-213ENST00000486037 SLF2Q8IX21 1173 aa12.09□□□□□ -0.47
SND1-213ENST00000486037 TEX11Q8IYF3 940 aa12.09□□□□□ -0.47
SND1-213ENST00000486037 C12orf42Q96LP6 360 aa12.09□□□□□ -0.47
SND1-213ENST00000486037 CD320Q9NPF0 282 aa12.09□□□□□ -0.47
SND1-213ENST00000486037 TBX21Q9UL17 535 aa12.09□□□□□ -0.47
SND1-213ENST00000486037 USP17L15C9J2P7 530 aa12.08□□□□□ -0.48
SND1-213ENST00000486037 USP17L13C9JLJ4 530 aa12.08□□□□□ -0.48
SND1-213ENST00000486037 USP17L11C9JVI0 530 aa12.08□□□□□ -0.48
SND1-213ENST00000486037 USP17L18D6R9N7 530 aa12.08□□□□□ -0.48
SND1-213ENST00000486037 USP17L22D6RA61 530 aa12.08□□□□□ -0.48
SND1-213ENST00000486037 USP17L17D6RBQ6 530 aa12.08□□□□□ -0.48
SND1-213ENST00000486037 USP17L19D6RCP7 530 aa12.08□□□□□ -0.48
SND1-213ENST00000486037 USP17L20D6RJB6 530 aa12.08□□□□□ -0.48
SND1-213ENST00000486037 TLL1O43897 1013 aa12.08□□□□□ -0.48
SND1-213ENST00000486037 MYOGP15173 224 aa12.08□□□□□ -0.48
SND1-213ENST00000486037 CSF2RAP15509 400 aa12.08□□□□□ -0.48
SND1-213ENST00000486037 TAL1P17542 331 aaPredicted RBP12.08□□□□□ -0.48
SND1-213ENST00000486037 VCAM1P19320 739 aa12.08□□□□□ -0.48
SND1-213ENST00000486037 TIMM10P62072 90 aa12.08□□□□□ -0.48
SND1-213ENST00000486037 USP17L24Q0WX57 530 aa12.08□□□□□ -0.48
SND1-213ENST00000486037 ERICH6Q7L0X2 663 aa12.08□□□□□ -0.48
SND1-213ENST00000486037 METTL16Q86W50 562 aaKnown RBP12.08□□□□□ -0.48
SND1-213ENST00000486037 SSH1Q8WYL5 1049 aa12.08□□□□□ -0.48
SND1-213ENST00000486037 MOV10L1Q9BXT6 1211 aaKnown RBP12.08□□□□□ -0.48
SND1-213ENST00000486037 XPNPEP3Q9NQH7 507 aa12.08□□□□□ -0.48
SND1-213ENST00000486037 CEP126Q9P2H0 1117 aa12.08□□□□□ -0.48
SND1-213ENST00000486037 PI4KBQ9UBF8 816 aa12.08□□□□□ -0.48
SND1-213ENST00000486037 PA2G4Q9UQ80 394 aaKnown RBP12.08□□□□□ -0.48
SND1-213ENST00000486037 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.08□□□□□ -0.48
SND1-213ENST00000486037 CDK5RAP2Q96SN8 1893 aa12.08□□□□□ -0.48
SND1-213ENST00000486037 PDS5AQ29RF7 1337 aaKnown RBP12.08□□□□□ -0.48
SND1-213ENST00000486037 RFXAPO00287 272 aa12.07□□□□□ -0.48
SND1-213ENST00000486037 ERC2O15083 957 aa12.07□□□□□ -0.48
SND1-213ENST00000486037 GH2P01242 217 aa12.07□□□□□ -0.48
SND1-213ENST00000486037 RABGGTBP53611 331 aa12.07□□□□□ -0.48
SND1-213ENST00000486037 IRX5P78411 483 aaPredicted RBP12.07□□□□□ -0.48
SND1-213ENST00000486037 KRT40Q6A162 431 aa12.07□□□□□ -0.48
SND1-213ENST00000486037 MFSD5Q6N075 450 aa12.07□□□□□ -0.48
SND1-213ENST00000486037 LBX2Q6XYB7 198 aa12.07□□□□□ -0.48
SND1-213ENST00000486037 ANKRD33Q7Z3H0 272 aa12.07□□□□□ -0.48
SND1-213ENST00000486037 MAPKAPK5Q8IW41 473 aa12.07□□□□□ -0.48
SND1-213ENST00000486037 ACER1Q8TDN7 264 aa12.07□□□□□ -0.48
SND1-213ENST00000486037 PALD1Q9ULE6 856 aa12.07□□□□□ -0.48
SND1-213ENST00000486037 ERCC3P19447 782 aa12.06□□□□□ -0.48
SND1-213ENST00000486037 SKIV2LQ15477 1246 aaKnown RBP12.06□□□□□ -0.48
SND1-213ENST00000486037 ALDH1L2Q3SY69 923 aa12.06□□□□□ -0.48
SND1-213ENST00000486037 C20orf194Q5TEA3 1177 aa12.06□□□□□ -0.48
SND1-213ENST00000486037 SPTY2D1Q68D10 685 aaPredicted RBP12.06□□□□□ -0.48
SND1-213ENST00000486037 MAML3Q96JK9 1138 aa12.06□□□□□ -0.48
SND1-213ENST00000486037 SMC4Q9NTJ3 1288 aa12.06□□□□□ -0.48
SND1-213ENST00000486037 HMG20BQ9P0W2 317 aa12.06□□□□□ -0.48
SND1-213ENST00000486037 FLT1P17948 1338 aa12.06□□□□□ -0.48
SND1-213ENST00000486037 CFAP54Q96N23 3096 aa12.05□□□□□ -0.48
SND1-213ENST00000486037 ADAMTS4O75173 837 aa12.05□□□□□ -0.48
SND1-213ENST00000486037 CIAO1O76071 339 aa12.05□□□□□ -0.48
SND1-213ENST00000486037 PPIGQ13427 754 aaKnown RBP eCLIP12.05□□□□□ -0.482e-8■■■□□ 15.4
SND1-213ENST00000486037 RAB30Q15771 203 aa12.05□□□□□ -0.48
SND1-213ENST00000486037 ADGRA1Q86SQ6 560 aa12.05□□□□□ -0.48
SND1-213ENST00000486037 MRPL50Q8N5N7 158 aaKnown RBP12.05□□□□□ -0.48
SND1-213ENST00000486037 TGFBRAP1Q8WUH2 860 aa12.05□□□□□ -0.48
SND1-213ENST00000486037 TOX2Q96NM4 488 aa12.05□□□□□ -0.48
SND1-213ENST00000486037 PPP1R12CQ9BZL4 782 aa12.05□□□□□ -0.48
SND1-213ENST00000486037 TSPYL2Q9H2G4 693 aaPredicted RBP12.05□□□□□ -0.48
SND1-213ENST00000486037 RPAP3Q9H6T3 665 aaPredicted RBP12.05□□□□□ -0.48
SND1-213ENST00000486037 SLC28A3Q9HAS3 691 aa12.05□□□□□ -0.48
SND1-213ENST00000486037 SAP30BPQ9UHR5 308 aaKnown RBP12.05□□□□□ -0.48
SND1-213ENST00000486037 MSRAQ9UJ68 235 aa12.05□□□□□ -0.48
SND1-213ENST00000486037 A0A0G2JMZ2 1700 aa12.04□□□□□ -0.48
SND1-213ENST00000486037 MYADML2A6NDP7 307 aa12.04□□□□□ -0.48
SND1-213ENST00000486037 EPOPA6NHQ4 379 aa12.04□□□□□ -0.48
SND1-213ENST00000486037 DCDC2CA8MYV0 355 aa12.04□□□□□ -0.48
SND1-213ENST00000486037 SMIM22K7EJ46 135 aa12.04□□□□□ -0.48
SND1-213ENST00000486037 MAP4K4O95819 1239 aaPredicted RBP12.04□□□□□ -0.48
SND1-213ENST00000486037 RARBP10826 455 aa12.04□□□□□ -0.48
SND1-213ENST00000486037 NHLH1Q02575 133 aa12.04□□□□□ -0.48
SND1-213ENST00000486037 AAK1Q2M2I8 961 aa12.04□□□□□ -0.48
SND1-213ENST00000486037 RNF180Q86T96 592 aa12.04□□□□□ -0.48
SND1-213ENST00000486037 CRACR2BQ8N4Y2 399 aaPredicted RBP12.04□□□□□ -0.48
SND1-213ENST00000486037 HERVK_113Q902F9 699 aa12.04□□□□□ -0.48
SND1-213ENST00000486037 XAGE2Q96GT9 111 aa12.04□□□□□ -0.48
SND1-213ENST00000486037 FEZ1Q99689 392 aa12.04□□□□□ -0.48
SND1-213ENST00000486037 DHX36Q9H2U1 1008 aaKnown RBP12.04□□□□□ -0.48
SND1-213ENST00000486037 STARD7Q9NQZ5 370 aa12.04□□□□□ -0.48
SND1-213ENST00000486037 AATFQ9NY61 560 aaKnown RBP eCLIP12.04□□□□□ -0.48
SND1-213ENST00000486037 TNNQ9UQP3 1299 aa12.04□□□□□ -0.48
SND1-213ENST00000486037 MTCH2Q9Y6C9 303 aa12.04□□□□□ -0.48
SND1-213ENST00000486037 FOCADQ5VW36 1801 aa12.04□□□□□ -0.48
SND1-213ENST00000486037 PI4K2BG5E9Z4 385 aa12.03□□□□□ -0.48
SND1-213ENST00000486037 ZNF865P0CJ78 1059 aaPredicted RBP12.03□□□□□ -0.48
SND1-213ENST00000486037 ACLYP53396 1101 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms