RNA–Protein interactions for RNA: ENST00000485962.5

SGSM3-213, Transcript of small G protein signaling modulator 3, human

TSL 5

Gene SGSM3, Length 2,973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SGSM3-213	ENST00000485962	RTL9	Q8NET4	1388 aa		13.98	□□□□□ -0.17
SGSM3-213	ENST00000485962	MAGEB6P1	A0A0J9YX57	407 aa		13.98	□□□□□ -0.17
SGSM3-213	ENST00000485962	EFCAB8	A8MWE9	144 aa		13.98	□□□□□ -0.17
SGSM3-213	ENST00000485962	TADA3	O75528	432 aa		13.98	□□□□□ -0.17
SGSM3-213	ENST00000485962	ADAMTS2	O95450	1211 aa		13.98	□□□□□ -0.17
SGSM3-213	ENST00000485962	KRT2	P35908	639 aa		13.98	□□□□□ -0.17
SGSM3-213	ENST00000485962	CHRND	Q07001	517 aa		13.98	□□□□□ -0.17
SGSM3-213	ENST00000485962	ADGRA1	Q86SQ6	560 aa		13.98	□□□□□ -0.17
SGSM3-213	ENST00000485962	ITFG2	Q969R8	447 aa		13.98	□□□□□ -0.17
SGSM3-213	ENST00000485962	CCDC97	Q96F63	343 aa	Predicted RBP	13.98	□□□□□ -0.17
SGSM3-213	ENST00000485962	RNF26	Q9BY78	433 aa	Predicted RBP	13.98	□□□□□ -0.17
SGSM3-213	ENST00000485962	PRPF38A	Q8NAV1	312 aa	Known RBP	13.98	□□□□□ -0.17
SGSM3-213	ENST00000485962	FAM53C	Q9NYF3	392 aa		13.98	□□□□□ -0.17
SGSM3-213	ENST00000485962	LRP5	O75197	1615 aa		13.98	□□□□□ -0.17
SGSM3-213	ENST00000485962	PNMA6A	P0CW24	399 aa	Predicted RBP	13.98	□□□□□ -0.17
SGSM3-213	ENST00000485962	GYS2	P54840	703 aa		13.98	□□□□□ -0.17
SGSM3-213	ENST00000485962	TEX35	Q5T0J7	233 aa		13.98	□□□□□ -0.17
SGSM3-213	ENST00000485962	IFIT1B	Q5T764	474 aa	Known RBP	13.98	□□□□□ -0.17
SGSM3-213	ENST00000485962	CATIP	Q7Z7H3	387 aa		13.98	□□□□□ -0.17
SGSM3-213	ENST00000485962	ANKRD23	Q86SG2	305 aa		13.98	□□□□□ -0.17
SGSM3-213	ENST00000485962	PROCA1	Q8NCQ7	364 aa	Predicted RBP	13.98	□□□□□ -0.17
SGSM3-213	ENST00000485962	MED15	Q96RN5	788 aa		13.98	□□□□□ -0.17
SGSM3-213	ENST00000485962	EPC1	Q9H2F5	836 aa		13.98	□□□□□ -0.17
SGSM3-213	ENST00000485962	FHOD1	Q9Y613	1164 aa		13.98	□□□□□ -0.17
SGSM3-213	ENST00000485962		V9GY48	417 aa	Predicted RBP	13.98	□□□□□ -0.17
SGSM3-213	ENST00000485962	SYNRG	Q9UMZ2	1314 aa		13.97	□□□□□ -0.17
SGSM3-213	ENST00000485962	TEX33	O43247	280 aa		13.97	□□□□□ -0.17
SGSM3-213	ENST00000485962	RAD21	O60216	631 aa		13.97	□□□□□ -0.17
SGSM3-213	ENST00000485962	ERCC5	P28715	1186 aa	Predicted RBP	13.97	□□□□□ -0.17
SGSM3-213	ENST00000485962	LRCH2	Q5VUJ6	765 aa		13.97	□□□□□ -0.17
SGSM3-213	ENST00000485962	ICE2	Q659A1	982 aa		13.97	□□□□□ -0.17
SGSM3-213	ENST00000485962	PPFIBP1	Q86W92	1011 aa		13.97	□□□□□ -0.17
SGSM3-213	ENST00000485962	EXOC8	Q8IYI6	725 aa		13.97	□□□□□ -0.17
SGSM3-213	ENST00000485962	SMYD4	Q8IYR2	804 aa	Predicted RBP	13.97	□□□□□ -0.17
SGSM3-213	ENST00000485962	SYMPK	Q92797	1274 aa	Known RBP	13.97	□□□□□ -0.17
SGSM3-213	ENST00000485962	NIP7	Q9Y221	180 aa	Known RBP eCLIP	13.97	□□□□□ -0.17
SGSM3-213	ENST00000485962	SLIT2	O94813	1529 aa		13.97	□□□□□ -0.17
SGSM3-213	ENST00000485962	BAZ2A	Q9UIF9	1905 aa	Known RBP	13.97	□□□□□ -0.17
SGSM3-213	ENST00000485962		A0A087X0B3	334 aa		13.97	□□□□□ -0.17
SGSM3-213	ENST00000485962	CYP2D7	A0A087X1C5	515 aa		13.97	□□□□□ -0.17
SGSM3-213	ENST00000485962	AKR1B15	C9JRZ8	316 aa	Predicted RBP	13.97	□□□□□ -0.17
SGSM3-213	ENST00000485962	MTF1	Q14872	753 aa		13.97	□□□□□ -0.17
SGSM3-213	ENST00000485962	NR1I3	Q14994	352 aa		13.97	□□□□□ -0.17
SGSM3-213	ENST00000485962	EARS2	Q5JPH6	523 aa	Known RBP	13.97	□□□□□ -0.17
SGSM3-213	ENST00000485962	MTA3	Q9BTC8	594 aa		13.97	□□□□□ -0.17
SGSM3-213	ENST00000485962	BRMS1	Q9HCU9	246 aa		13.97	□□□□□ -0.17
SGSM3-213	ENST00000485962	AATF	Q9NY61	560 aa	Known RBP eCLIP	13.97	□□□□□ -0.17
SGSM3-213	ENST00000485962	BCOR	Q6W2J9	1755 aa		13.97	□□□□□ -0.17
SGSM3-213	ENST00000485962	SEC31A	O94979	1220 aa	Known RBP	13.96	□□□□□ -0.17
SGSM3-213	ENST00000485962	PLEKHA8P1	O95397	391 aa		13.96	□□□□□ -0.17
SGSM3-213	ENST00000485962	TPM1	P09493	284 aa		13.96	□□□□□ -0.17
SGSM3-213	ENST00000485962	GYG1	P46976	350 aa		13.96	□□□□□ -0.17
SGSM3-213	ENST00000485962	RCAN1	P53805	252 aa		13.96	□□□□□ -0.17
SGSM3-213	ENST00000485962	PPP2R3A	Q06190	1150 aa		13.96	□□□□□ -0.17
SGSM3-213	ENST00000485962	SEC23A	Q15436	765 aa		13.96	□□□□□ -0.17
SGSM3-213	ENST00000485962	ZNF174	Q15697	407 aa		13.96	□□□□□ -0.17
SGSM3-213	ENST00000485962	ENAH	Q8N8S7	591 aa	Predicted RBP	13.96	□□□□□ -0.17
SGSM3-213	ENST00000485962	CCDC12	Q8WUD4	166 aa	Predicted RBP	13.96	□□□□□ -0.17
SGSM3-213	ENST00000485962	STAM	Q92783	540 aa		13.96	□□□□□ -0.17
SGSM3-213	ENST00000485962	ZSCAN10	Q96SZ4	725 aa	Predicted RBP	13.96	□□□□□ -0.17
SGSM3-213	ENST00000485962	LZTFL1	Q9NQ48	299 aa		13.96	□□□□□ -0.17
SGSM3-213	ENST00000485962	GOLGA6C	A6NDK9	693 aa		13.96	□□□□□ -0.17
SGSM3-213	ENST00000485962	GOLGA6B	A6NDN3	693 aa		13.96	□□□□□ -0.17
SGSM3-213	ENST00000485962	SOWAHD	A6NJG2	315 aa		13.96	□□□□□ -0.17
SGSM3-213	ENST00000485962	CCDC175	P0C221	793 aa		13.96	□□□□□ -0.17
SGSM3-213	ENST00000485962	GOLGA6D	P0CG33	693 aa		13.96	□□□□□ -0.17
SGSM3-213	ENST00000485962	EIF5	P55010	431 aa	Known RBP	13.96	□□□□□ -0.17
SGSM3-213	ENST00000485962	PPP2R5A	Q15172	486 aa		13.96	□□□□□ -0.17
SGSM3-213	ENST00000485962	IQCA1	Q86XH1	822 aa		13.96	□□□□□ -0.17
SGSM3-213	ENST00000485962	IGSF22	Q8N9C0	903 aa		13.96	□□□□□ -0.17
SGSM3-213	ENST00000485962	SHISA4	Q96DD7	197 aa		13.96	□□□□□ -0.17
SGSM3-213	ENST00000485962	GOLGA6A	Q9NYA3	693 aa		13.96	□□□□□ -0.17
SGSM3-213	ENST00000485962		A0A1B0GTH6	734 aa		13.95	□□□□□ -0.18
SGSM3-213	ENST00000485962	UBAP1L	F5GYI3	381 aa		13.95	□□□□□ -0.18
SGSM3-213	ENST00000485962	ATP6V1A	P38606	617 aa		13.95	□□□□□ -0.18
SGSM3-213	ENST00000485962	MFSD4B	Q5TF39	518 aa		13.95	□□□□□ -0.18
SGSM3-213	ENST00000485962	CREBRF	Q8IUR6	639 aa		13.95	□□□□□ -0.18
SGSM3-213	ENST00000485962	PAGE5	Q96GU1	130 aa		13.95	□□□□□ -0.18
SGSM3-213	ENST00000485962	CCDC87	Q9NVE4	849 aa		13.95	□□□□□ -0.18
SGSM3-213	ENST00000485962	CD44	P16070	742 aa	Known RBP	13.95	□□□□□ -0.18
SGSM3-213	ENST00000485962	PPP2R5B	Q15173	497 aa		13.95	□□□□□ -0.18
SGSM3-213	ENST00000485962	PKN1	Q16512	942 aa		13.95	□□□□□ -0.18
SGSM3-213	ENST00000485962	FILIP1L	Q4L180	1135 aa		13.95	□□□□□ -0.18
SGSM3-213	ENST00000485962	SPATA1	Q5VX52	437 aa		13.95	□□□□□ -0.18
SGSM3-213	ENST00000485962	SPATA20	Q8TB22	786 aa		13.95	□□□□□ -0.18
SGSM3-213	ENST00000485962	PHF20	Q9BVI0	1012 aa		13.95	□□□□□ -0.18
SGSM3-213	ENST00000485962	GNL3L	Q9NVN8	582 aa	Known RBP	13.95	□□□□□ -0.18
SGSM3-213	ENST00000485962	DYNLL1	P63167	89 aa	Known RBP	13.95	□□□□□ -0.18
SGSM3-213	ENST00000485962	MAP3K9	P80192	1104 aa		13.95	□□□□□ -0.18
SGSM3-213	ENST00000485962	RBL2	Q08999	1139 aa		13.95	□□□□□ -0.18
SGSM3-213	ENST00000485962	IRX2	Q9BZI1	471 aa	Predicted RBP	13.95	□□□□□ -0.18
SGSM3-213	ENST00000485962	MRPL44	Q9H9J2	332 aa	Known RBP	13.95	□□□□□ -0.18
SGSM3-213	ENST00000485962	MRFAP1	Q9Y605	127 aa		13.95	□□□□□ -0.18
SGSM3-213	ENST00000485962	WNT7A	O00755	349 aa		13.94	□□□□□ -0.18
SGSM3-213	ENST00000485962	COBL	O75128	1261 aa		13.94	□□□□□ -0.18
SGSM3-213	ENST00000485962	CRKL	P46109	303 aa	Known RBP	13.94	□□□□□ -0.18
SGSM3-213	ENST00000485962	PARP10	Q53GL7	1025 aa		13.94	□□□□□ -0.18
SGSM3-213	ENST00000485962	ACSBG1	Q96GR2	724 aa		13.94	□□□□□ -0.18
SGSM3-213	ENST00000485962	ZSWIM4	Q9H7M6	989 aa		13.94	□□□□□ -0.18
SGSM3-213	ENST00000485962	CALCOCO1	Q9P1Z2	691 aa		13.94	□□□□□ -0.18

Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms