RNA–Protein interactions for RNA: ENST00000485871.1

SND1-212, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 597 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-212ENST00000485871 MKL1Q969V6 931 aa13.23□□□□□ -0.29
SND1-212ENST00000485871 NCOA5Q9HCD5 579 aaKnown RBP13.23□□□□□ -0.29
SND1-212ENST00000485871 SLC12A7Q9Y666 1083 aa13.23□□□□□ -0.29
SND1-212ENST00000485871 GOLGA8AA7E2F4 631 aa13.22□□□□□ -0.29
SND1-212ENST00000485871 MPHOSPH10O00566 681 aaKnown RBP13.22□□□□□ -0.29
SND1-212ENST00000485871 TTLL1O95922 423 aa13.22□□□□□ -0.29
SND1-212ENST00000485871 METAP2P50579 478 aaKnown RBP eCLIP13.22□□□□□ -0.291e-11■■□□□ 14.1
SND1-212ENST00000485871 PAXIP1Q6ZW49 1069 aaPredicted RBP13.22□□□□□ -0.29
SND1-212ENST00000485871 MICU3Q86XE3 530 aa13.22□□□□□ -0.29
SND1-212ENST00000485871 SPRYD3Q8NCJ5 442 aa13.22□□□□□ -0.29
SND1-212ENST00000485871 PNMA1Q8ND90 353 aa13.22□□□□□ -0.29
SND1-212ENST00000485871 HOOK2Q96ED9 719 aa13.22□□□□□ -0.29
SND1-212ENST00000485871 CDCA5Q96FF9 252 aa13.22□□□□□ -0.29
SND1-212ENST00000485871 MAP3K14Q99558 947 aa13.22□□□□□ -0.29
SND1-212ENST00000485871 LLPHQ9BRT6 129 aaKnown RBP13.22□□□□□ -0.29
SND1-212ENST00000485871 ZNF341Q9BYN7 854 aa13.22□□□□□ -0.29
SND1-212ENST00000485871 GLIS2Q9BZE0 524 aaPredicted RBP13.22□□□□□ -0.29
SND1-212ENST00000485871 KANSL2Q9H9L4 492 aa13.22□□□□□ -0.29
SND1-212ENST00000485871 FOXD4L1Q9NU39 408 aa13.22□□□□□ -0.29
SND1-212ENST00000485871 GINM1Q9NU53 330 aa13.22□□□□□ -0.29
SND1-212ENST00000485871 STX8Q9UNK0 236 aa13.22□□□□□ -0.29
SND1-212ENST00000485871 PARP14Q460N5 1801 aa13.22□□□□□ -0.29
SND1-212ENST00000485871 A0A1W2PRG0 241 aa13.21□□□□□ -0.29
SND1-212ENST00000485871 JAK2O60674 1132 aa13.21□□□□□ -0.29
SND1-212ENST00000485871 DTNBO60941 627 aa13.21□□□□□ -0.29
SND1-212ENST00000485871 USP2O75604 605 aaPredicted RBP13.21□□□□□ -0.29
SND1-212ENST00000485871 CALM1P0DP23 149 aa13.21□□□□□ -0.29
SND1-212ENST00000485871 CALM2P0DP24 149 aa13.21□□□□□ -0.29
SND1-212ENST00000485871 CALM3P0DP25 149 aa13.21□□□□□ -0.29
SND1-212ENST00000485871 SNHG28P0DPA3 235 aa13.21□□□□□ -0.29
SND1-212ENST00000485871 EEF2P13639 858 aaKnown RBP13.21□□□□□ -0.29
SND1-212ENST00000485871 INPP5BP32019 993 aa13.21□□□□□ -0.29
SND1-212ENST00000485871 ADD1P35611 737 aaKnown RBP13.21□□□□□ -0.29
SND1-212ENST00000485871 FUT2Q10981 343 aa13.21□□□□□ -0.29
SND1-212ENST00000485871 GRM4Q14833 912 aa13.21□□□□□ -0.29
SND1-212ENST00000485871 SUPT20HL1Q3ZLR7 823 aa13.21□□□□□ -0.29
SND1-212ENST00000485871 CDC37L1Q7L3B6 337 aa13.21□□□□□ -0.29
SND1-212ENST00000485871 RASGRP2Q7LDG7 609 aa13.21□□□□□ -0.29
SND1-212ENST00000485871 CATIPQ7Z7H3 387 aa13.21□□□□□ -0.29
SND1-212ENST00000485871 USP48Q86UV5 1035 aa13.21□□□□□ -0.29
SND1-212ENST00000485871 FANCBQ8NB91 859 aa13.21□□□□□ -0.29
SND1-212ENST00000485871 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.21□□□□□ -0.293e-22■□□□□ 8.5
SND1-212ENST00000485871 KAT14Q9H8E8 782 aa13.21□□□□□ -0.29
SND1-212ENST00000485871 CWC22Q9HCG8 908 aaKnown RBP13.21□□□□□ -0.29
SND1-212ENST00000485871 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.21□□□□□ -0.29
SND1-212ENST00000485871 SYNPO2Q9UMS6 1093 aa13.21□□□□□ -0.29
SND1-212ENST00000485871 FZD1Q9UP38 647 aa13.21□□□□□ -0.29
SND1-212ENST00000485871 CTNND1O60716 968 aaKnown RBP13.2□□□□□ -0.3
SND1-212ENST00000485871 ASNSP08243 561 aa13.2□□□□□ -0.3
SND1-212ENST00000485871 ICA1Q05084 483 aa13.2□□□□□ -0.3
SND1-212ENST00000485871 GRM1Q13255 1194 aa13.2□□□□□ -0.3
SND1-212ENST00000485871 PPP2R5BQ15173 497 aa13.2□□□□□ -0.3
SND1-212ENST00000485871 MAP3K11Q16584 847 aa13.2□□□□□ -0.3
SND1-212ENST00000485871 RTN1Q16799 776 aa13.2□□□□□ -0.3
SND1-212ENST00000485871 PPP4R3BQ5MIZ7 849 aa13.2□□□□□ -0.3
SND1-212ENST00000485871 NOL9Q5SY16 702 aaKnown RBP13.2□□□□□ -0.3
SND1-212ENST00000485871 MAP1SQ66K74 1059 aaPredicted RBP13.2□□□□□ -0.3
SND1-212ENST00000485871 NBPF11Q86T75 865 aa13.2□□□□□ -0.3
SND1-212ENST00000485871 CCDC144CPQ8IYA2 1237 aa13.2□□□□□ -0.3
SND1-212ENST00000485871 LRRC47Q8N1G4 583 aaKnown RBP13.2□□□□□ -0.3
SND1-212ENST00000485871 CABP5Q9NP86 173 aa13.2□□□□□ -0.3
SND1-212ENST00000485871 CLIP2Q9UDT6 1046 aa13.2□□□□□ -0.3
SND1-212ENST00000485871 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.2□□□□□ -0.3
SND1-212ENST00000485871 PTPDC1A2A3K4 754 aa13.19□□□□□ -0.3
SND1-212ENST00000485871 PALM3A6NDB9 673 aaPredicted RBP13.19□□□□□ -0.3
SND1-212ENST00000485871 PDHBP11177 359 aa13.19□□□□□ -0.3
SND1-212ENST00000485871 FDPSP14324 419 aaKnown RBP13.19□□□□□ -0.3
SND1-212ENST00000485871 IFNAR1P17181 557 aa13.19□□□□□ -0.3
SND1-212ENST00000485871 ECE1P42892 770 aa13.19□□□□□ -0.3
SND1-212ENST00000485871 SLC35G1Q2M3R5 365 aa13.19□□□□□ -0.3
SND1-212ENST00000485871 SYNE3Q6ZMZ3 975 aa13.19□□□□□ -0.3
SND1-212ENST00000485871 CCDC84Q86UT8 332 aaPredicted RBP13.19□□□□□ -0.3
SND1-212ENST00000485871 SCYL3Q8IZE3 742 aa13.19□□□□□ -0.3
SND1-212ENST00000485871 NUP133Q8WUM0 1156 aa13.19□□□□□ -0.3
SND1-212ENST00000485871 MAD2L2Q9UI95 211 aa13.19□□□□□ -0.3
SND1-212ENST00000485871 NAP1L2Q9ULW6 460 aaPredicted RBP13.19□□□□□ -0.3
SND1-212ENST00000485871 BAZ2BQ9UIF8 2168 aaKnown RBP13.19□□□□□ -0.3
SND1-212ENST00000485871 LOC285556D6RIA3 1793 aa13.18□□□□□ -0.3
SND1-212ENST00000485871 MYH15Q9Y2K3 1946 aa13.18□□□□□ -0.3
SND1-212ENST00000485871 DDX11L8A8MPP1 907 aa13.18□□□□□ -0.3
SND1-212ENST00000485871 PLEKHA8P1O95397 391 aa13.18□□□□□ -0.3
SND1-212ENST00000485871 GJB2P29033 226 aa13.18□□□□□ -0.3
SND1-212ENST00000485871 RAB3GAP1Q15042 981 aa13.18□□□□□ -0.3
SND1-212ENST00000485871 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.18□□□□□ -0.3
SND1-212ENST00000485871 TMTC3Q6ZXV5 915 aa13.18□□□□□ -0.3
SND1-212ENST00000485871 STAG2Q8N3U4 1231 aa13.18□□□□□ -0.3
SND1-212ENST00000485871 GMCL1P1Q8NEA9 526 aa13.18□□□□□ -0.3
SND1-212ENST00000485871 ACER1Q8TDN7 264 aa13.18□□□□□ -0.3
SND1-212ENST00000485871 CHMP4CQ96CF2 233 aa13.18□□□□□ -0.3
SND1-212ENST00000485871 CAPNS2Q96L46 248 aa13.18□□□□□ -0.3
SND1-212ENST00000485871 WRNIP1Q96S55 665 aa13.18□□□□□ -0.3
SND1-212ENST00000485871 RBM28Q9NW13 759 aaKnown RBP13.18□□□□□ -0.3
SND1-212ENST00000485871 SMC3Q9UQE7 1217 aa13.18□□□□□ -0.3
SND1-212ENST00000485871 TMX2Q9Y320 296 aa13.18□□□□□ -0.3
SND1-212ENST00000485871 RLFQ13129 1914 aa13.17□□□□□ -0.3
SND1-212ENST00000485871 CNTNAP5Q8WYK1 1306 aa13.17□□□□□ -0.3
SND1-212ENST00000485871 STK36Q9NRP7 1315 aa13.17□□□□□ -0.3
SND1-212ENST00000485871 TRAF5O00463 557 aa13.17□□□□□ -0.3
SND1-212ENST00000485871 DHX16O60231 1041 aaKnown RBP13.17□□□□□ -0.3
SND1-212ENST00000485871 NUCB2P80303 420 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms