RNA–Protein interactions for RNA: ENST00000485867.5

SMC4-217, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 629 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-217ENST00000485867 ASTN2O75129 1339 aaPredicted RBP8.8□□□□□ -1
SMC4-217ENST00000485867 BRCA2P51587 3418 aa8.79□□□□□ -1
SMC4-217ENST00000485867 KDM3BQ7LBC6 1761 aa8.79□□□□□ -1
SMC4-217ENST00000485867 A6NJR5 290 aa8.79□□□□□ -1
SMC4-217ENST00000485867 FKTNO75072 461 aa8.79□□□□□ -1
SMC4-217ENST00000485867 ALBP02768 609 aa8.79□□□□□ -1
SMC4-217ENST00000485867 KIF4BQ2VIQ3 1234 aa8.79□□□□□ -1
SMC4-217ENST00000485867 TTLL7Q6ZT98 887 aa8.79□□□□□ -1
SMC4-217ENST00000485867 BTLAQ7Z6A9 289 aa8.79□□□□□ -1
SMC4-217ENST00000485867 SP8Q8IXZ3 490 aa8.79□□□□□ -1
SMC4-217ENST00000485867 KNSTRNQ9Y448 316 aa8.79□□□□□ -1
SMC4-217ENST00000485867 CENPFP49454 3210 aa8.79□□□□□ -1
SMC4-217ENST00000485867 LAMB1P07942 1786 aa8.78□□□□□ -1
SMC4-217ENST00000485867 RTL9Q8NET4 1388 aa8.78□□□□□ -1
SMC4-217ENST00000485867 BBOX1O75936 387 aa8.78□□□□□ -1
SMC4-217ENST00000485867 RPS12P25398 132 aaKnown RBP8.78□□□□□ -1
SMC4-217ENST00000485867 FKBP1BP68106 108 aa8.78□□□□□ -1
SMC4-217ENST00000485867 INTS3Q68E01 1043 aaKnown RBP8.78□□□□□ -1
SMC4-217ENST00000485867 ZNF34Q8IZ26 560 aa8.78□□□□□ -1
SMC4-217ENST00000485867 MICALL1Q8N3F8 863 aa8.78□□□□□ -1
SMC4-217ENST00000485867 NGEFQ8N5V2 710 aa8.78□□□□□ -1
SMC4-217ENST00000485867 CALR3Q96L12 384 aaKnown RBP8.78□□□□□ -1
SMC4-217ENST00000485867 R3HDMLQ9H3Y0 253 aa8.78□□□□□ -1
SMC4-217ENST00000485867 SPDYE3A6NKU9 549 aa8.77□□□□□ -1.01
SMC4-217ENST00000485867 U2SURPO15042 1029 aaKnown RBP8.77□□□□□ -1.01
SMC4-217ENST00000485867 TM4SF4P48230 202 aa8.77□□□□□ -1.01
SMC4-217ENST00000485867 DPYDQ12882 1025 aa8.77□□□□□ -1.01
SMC4-217ENST00000485867 HIF1AQ16665 826 aa8.77□□□□□ -1.01
SMC4-217ENST00000485867 SLC10A5Q5PT55 438 aa8.77□□□□□ -1.01
SMC4-217ENST00000485867 KIF6Q6ZMV9 814 aa8.77□□□□□ -1.01
SMC4-217ENST00000485867 C20orf204Q6ZNR8 217 aa8.77□□□□□ -1.01
SMC4-217ENST00000485867 C8orf86Q6ZUL3 223 aa8.77□□□□□ -1.01
SMC4-217ENST00000485867 DBNDD1Q9H9R9 158 aa8.77□□□□□ -1.01
SMC4-217ENST00000485867 FAM196BA6NMK8 535 aa8.76□□□□□ -1.01
SMC4-217ENST00000485867 NID1P14543 1247 aa8.76□□□□□ -1.01
SMC4-217ENST00000485867 EN2P19622 333 aaPredicted RBP8.76□□□□□ -1.01
SMC4-217ENST00000485867 RTN1Q16799 776 aa8.76□□□□□ -1.01
SMC4-217ENST00000485867 PARP10Q53GL7 1025 aa8.76□□□□□ -1.01
SMC4-217ENST00000485867 IER5Q5VY09 327 aa8.76□□□□□ -1.01
SMC4-217ENST00000485867 MOB2Q70IA6 237 aa8.76□□□□□ -1.01
SMC4-217ENST00000485867 OTOP1Q7RTM1 612 aa8.76□□□□□ -1.01
SMC4-217ENST00000485867 PPP1R42Q7Z4L9 355 aa8.76□□□□□ -1.01
SMC4-217ENST00000485867 SLC17A8Q8NDX2 589 aa8.76□□□□□ -1.01
SMC4-217ENST00000485867 BHMTQ93088 406 aa8.76□□□□□ -1.01
SMC4-217ENST00000485867 PHACTR3Q96KR7 559 aa8.76□□□□□ -1.01
SMC4-217ENST00000485867 TRIM17Q9Y577 477 aa8.76□□□□□ -1.01
SMC4-217ENST00000485867 DLG5Q8TDM6 1919 aa8.76□□□□□ -1.01
SMC4-217ENST00000485867 ZNF609O15014 1411 aa8.75□□□□□ -1.01
SMC4-217ENST00000485867 USP17L15C9J2P7 530 aa8.75□□□□□ -1.01
SMC4-217ENST00000485867 USP17L10C9JJH3 530 aa8.75□□□□□ -1.01
SMC4-217ENST00000485867 USP17L13C9JLJ4 530 aa8.75□□□□□ -1.01
SMC4-217ENST00000485867 USP17L12C9JPN9 530 aa8.75□□□□□ -1.01
SMC4-217ENST00000485867 USP17L11C9JVI0 530 aa8.75□□□□□ -1.01
SMC4-217ENST00000485867 USP17L21D6R901 530 aa8.75□□□□□ -1.01
SMC4-217ENST00000485867 USP17L18D6R9N7 530 aa8.75□□□□□ -1.01
SMC4-217ENST00000485867 USP17L22D6RA61 530 aa8.75□□□□□ -1.01
SMC4-217ENST00000485867 USP17L17D6RBQ6 530 aa8.75□□□□□ -1.01
SMC4-217ENST00000485867 USP17L19D6RCP7 530 aa8.75□□□□□ -1.01
SMC4-217ENST00000485867 USP17L20D6RJB6 530 aa8.75□□□□□ -1.01
SMC4-217ENST00000485867 UBE2Q2LH0YL09 131 aa8.75□□□□□ -1.01
SMC4-217ENST00000485867 ECE2O60344 883 aa8.75□□□□□ -1.01
SMC4-217ENST00000485867 LGR5O75473 907 aa8.75□□□□□ -1.01
SMC4-217ENST00000485867 IGFBP4P22692 258 aa8.75□□□□□ -1.01
SMC4-217ENST00000485867 USP17L24Q0WX57 530 aa8.75□□□□□ -1.01
SMC4-217ENST00000485867 GRAPQ13588 217 aa8.75□□□□□ -1.01
SMC4-217ENST00000485867 PRRT3Q5FWE3 981 aa8.75□□□□□ -1.01
SMC4-217ENST00000485867 ANGEL2Q5VTE6 544 aaKnown RBP8.75□□□□□ -1.01
SMC4-217ENST00000485867 MCM10Q7L590 875 aa8.75□□□□□ -1.01
SMC4-217ENST00000485867 ANKMY2Q8IV38 441 aa8.75□□□□□ -1.01
SMC4-217ENST00000485867 GRAPLQ8TC17 118 aaPredicted RBP8.75□□□□□ -1.01
SMC4-217ENST00000485867 HINFPQ9BQA5 517 aa8.75□□□□□ -1.01
SMC4-217ENST00000485867 KCNQ5Q9NR82 932 aa8.75□□□□□ -1.01
SMC4-217ENST00000485867 DMGDHQ9UI17 866 aaKnown RBP8.75□□□□□ -1.01
SMC4-217ENST00000485867 COL4A1P02462 1669 aa8.75□□□□□ -1.01
SMC4-217ENST00000485867 RANBP2P49792 3224 aaKnown RBP8.74□□□□□ -1.01
SMC4-217ENST00000485867 ITGB7P26010 798 aa8.74□□□□□ -1.01
SMC4-217ENST00000485867 PRKAR2BP31323 418 aa8.74□□□□□ -1.01
SMC4-217ENST00000485867 SREBF2Q12772 1141 aa8.74□□□□□ -1.01
SMC4-217ENST00000485867 XP32Q5T750 250 aa8.74□□□□□ -1.01
SMC4-217ENST00000485867 ARMC5Q96C12 935 aa8.74□□□□□ -1.01
SMC4-217ENST00000485867 UTP14AQ9BVJ6 771 aaKnown RBP8.74□□□□□ -1.01
SMC4-217ENST00000485867 RRP7AQ9Y3A4 280 aaKnown RBP8.74□□□□□ -1.01
SMC4-217ENST00000485867 PITPNM2Q9BZ72 1349 aa8.74□□□□□ -1.01
SMC4-217ENST00000485867 COL6A3P12111 3177 aa8.73□□□□□ -1.01
SMC4-217ENST00000485867 H0YGN5 161 aa8.73□□□□□ -1.01
SMC4-217ENST00000485867 FAM229AH3BQW9 127 aa8.73□□□□□ -1.01
SMC4-217ENST00000485867 TGFBR3LH3BV60 316 aa8.73□□□□□ -1.01
SMC4-217ENST00000485867 VIL1P09327 827 aaKnown RBP8.73□□□□□ -1.01
SMC4-217ENST00000485867 HCLS1P14317 486 aaPredicted RBP8.73□□□□□ -1.01
SMC4-217ENST00000485867 MYL6BP14649 208 aa8.73□□□□□ -1.01
SMC4-217ENST00000485867 GATA4P43694 442 aa8.73□□□□□ -1.01
SMC4-217ENST00000485867 ZNF280AP59817 542 aaPredicted RBP8.73□□□□□ -1.01
SMC4-217ENST00000485867 DOC2BQ14184 412 aa8.73□□□□□ -1.01
SMC4-217ENST00000485867 DCTN1Q14203 1278 aa8.73□□□□□ -1.01
SMC4-217ENST00000485867 DDX46Q7L014 1031 aaKnown RBP8.73□□□□□ -1.01
SMC4-217ENST00000485867 TMC4Q7Z404 712 aa8.73□□□□□ -1.01
SMC4-217ENST00000485867 RTF1Q92541 710 aaKnown RBP8.73□□□□□ -1.01
SMC4-217ENST00000485867 EFCC1Q9HA90 598 aa8.73□□□□□ -1.01
SMC4-217ENST00000485867 A0A0C4DFX4 3053 aa8.73□□□□□ -1.01
SMC4-217ENST00000485867 ZNF646O15015 1829 aaPredicted RBP8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms