RNA–Protein interactions for RNA: ENST00000485790.1

SCAF4-206, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 2

Gene SCAF4, Length 1,282 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-206ENST00000485790 HOXC6P09630 235 aa16.52■□□□□ 0.24
SCAF4-206ENST00000485790 CNGA1P29973 690 aa16.52■□□□□ 0.24
SCAF4-206ENST00000485790 ICA1Q05084 483 aa16.52■□□□□ 0.24
SCAF4-206ENST00000485790 C7orf61Q8IZ16 206 aa16.52■□□□□ 0.24
SCAF4-206ENST00000485790 SHCBP1Q8NEM2 672 aa16.52■□□□□ 0.24
SCAF4-206ENST00000485790 MROH8Q9H579 483 aa16.52■□□□□ 0.24
SCAF4-206ENST00000485790 SMARCA5O60264 1052 aaPredicted RBP16.51■□□□□ 0.23
SCAF4-206ENST00000485790 FLOT1O75955 427 aa16.51■□□□□ 0.23
SCAF4-206ENST00000485790 CCND3P30281 292 aaPredicted RBP16.51■□□□□ 0.23
SCAF4-206ENST00000485790 DSG3P32926 999 aa16.51■□□□□ 0.23
SCAF4-206ENST00000485790 GRB14Q14449 540 aa16.51■□□□□ 0.23
SCAF4-206ENST00000485790 PLS1Q14651 629 aa16.51■□□□□ 0.23
SCAF4-206ENST00000485790 LHX8Q68G74 356 aa16.51■□□□□ 0.23
SCAF4-206ENST00000485790 SLC44A5Q8NCS7 719 aa16.51■□□□□ 0.23
SCAF4-206ENST00000485790 MOV10L1Q9BXT6 1211 aaKnown RBP16.51■□□□□ 0.23
SCAF4-206ENST00000485790 SPATC1LQ9H0A9 340 aa16.51■□□□□ 0.23
SCAF4-206ENST00000485790 DCTPP1Q9H773 170 aa16.51■□□□□ 0.23
SCAF4-206ENST00000485790 ZNF287Q9HBT7 754 aa16.51■□□□□ 0.23
SCAF4-206ENST00000485790 PHIPQ8WWQ0 1821 aa16.5■□□□□ 0.23
SCAF4-206ENST00000485790 ZFYP08048 801 aaPredicted RBP16.5■□□□□ 0.23
SCAF4-206ENST00000485790 AKR1B1P15121 316 aa16.5■□□□□ 0.23
SCAF4-206ENST00000485790 C20orf194Q5TEA3 1177 aa16.5■□□□□ 0.23
SCAF4-206ENST00000485790 GIMAP6Q6P9H5 292 aa16.5■□□□□ 0.23
SCAF4-206ENST00000485790 CTR9Q6PD62 1173 aa16.5■□□□□ 0.23
SCAF4-206ENST00000485790 C16orf86Q6ZW13 317 aa16.5■□□□□ 0.23
SCAF4-206ENST00000485790 PRO3102Q9H379 93 aa16.5■□□□□ 0.23
SCAF4-206ENST00000485790 VCPKMTQ9H867 229 aa16.5■□□□□ 0.23
SCAF4-206ENST00000485790 MKNK2Q9HBH9 465 aa16.5■□□□□ 0.23
SCAF4-206ENST00000485790 GOPCQ9HD26 462 aa16.5■□□□□ 0.23
SCAF4-206ENST00000485790 CEP290O15078 2479 aa16.5■□□□□ 0.23
SCAF4-206ENST00000485790 WDR46O15213 610 aaKnown RBP16.49■□□□□ 0.23
SCAF4-206ENST00000485790 SLC25A27O95847 323 aa16.49■□□□□ 0.23
SCAF4-206ENST00000485790 ERCC3P19447 782 aa16.49■□□□□ 0.23
SCAF4-206ENST00000485790 BMP8BP34820 402 aa16.49■□□□□ 0.23
SCAF4-206ENST00000485790 MNX1P50219 401 aaPredicted RBP16.49■□□□□ 0.23
SCAF4-206ENST00000485790 SLFNL1Q499Z3 407 aa16.49■□□□□ 0.23
SCAF4-206ENST00000485790 SAMD1Q6SPF0 538 aaPredicted RBP16.49■□□□□ 0.23
SCAF4-206ENST00000485790 NCAPG2Q86XI2 1143 aa16.49■□□□□ 0.23
SCAF4-206ENST00000485790 SIAH1Q8IUQ4 282 aa16.49■□□□□ 0.23
SCAF4-206ENST00000485790 ABRAQ8N0Z2 381 aa16.49■□□□□ 0.23
SCAF4-206ENST00000485790 SPICE1Q8N0Z3 855 aa16.49■□□□□ 0.23
SCAF4-206ENST00000485790 ARRDC4Q8NCT1 418 aa16.49■□□□□ 0.23
SCAF4-206ENST00000485790 STRBPQ96SI9 672 aaKnown RBP16.49■□□□□ 0.23
SCAF4-206ENST00000485790 PUS7LQ9H0K6 701 aaKnown RBP16.49■□□□□ 0.23
SCAF4-206ENST00000485790 ARPP21Q9UBL0 812 aaPredicted RBP16.49■□□□□ 0.23
SCAF4-206ENST00000485790 ZBTB47Q9UFB7 747 aaPredicted RBP16.49■□□□□ 0.23
SCAF4-206ENST00000485790 DDX20Q9UHI6 824 aaKnown RBP16.49■□□□□ 0.23
SCAF4-206ENST00000485790 RNF113AO15541 343 aaKnown RBP16.48■□□□□ 0.23
SCAF4-206ENST00000485790 RAD21O60216 631 aa16.48■□□□□ 0.23
SCAF4-206ENST00000485790 APPP05067 770 aa16.48■□□□□ 0.23
SCAF4-206ENST00000485790 FCER1AP12319 257 aa16.48■□□□□ 0.23
SCAF4-206ENST00000485790 EEF2P13639 858 aaKnown RBP16.48■□□□□ 0.23
SCAF4-206ENST00000485790 GNAT2P19087 354 aa16.48■□□□□ 0.23
SCAF4-206ENST00000485790 ADORA2AP29274 412 aa16.48■□□□□ 0.23
SCAF4-206ENST00000485790 OLFML2BQ68BL8 750 aa16.48■□□□□ 0.23
SCAF4-206ENST00000485790 KBTBD3Q8NAB2 608 aa16.48■□□□□ 0.23
SCAF4-206ENST00000485790 ZMYND8Q9ULU4 1186 aaPredicted RBP16.48■□□□□ 0.23
SCAF4-206ENST00000485790 MAST2Q6P0Q8 1798 aa16.47■□□□□ 0.23
SCAF4-206ENST00000485790 CYP2D7A0A087X1C5 515 aa16.47■□□□□ 0.23
SCAF4-206ENST00000485790 MINDY4BA8MYZ0 360 aa16.47■□□□□ 0.23
SCAF4-206ENST00000485790 ERC2O15083 957 aa16.47■□□□□ 0.23
SCAF4-206ENST00000485790 COL6A1P12109 1028 aa16.47■□□□□ 0.23
SCAF4-206ENST00000485790 CYP2C19P33261 490 aa16.47■□□□□ 0.23
SCAF4-206ENST00000485790 EVX2Q03828 476 aa16.47■□□□□ 0.23
SCAF4-206ENST00000485790 SBK1Q52WX2 424 aa16.47■□□□□ 0.23
SCAF4-206ENST00000485790 ZNF444Q8N0Y2 327 aaPredicted RBP16.47■□□□□ 0.23
SCAF4-206ENST00000485790 SENP6Q9GZR1 1112 aaPredicted RBP16.47■□□□□ 0.23
SCAF4-206ENST00000485790 FLRT1Q9NZU1 646 aa16.47■□□□□ 0.23
SCAF4-206ENST00000485790 LOC285556D6RIA3 1793 aa16.46■□□□□ 0.23
SCAF4-206ENST00000485790 NPLOC4Q8TAT6 608 aa16.46■□□□□ 0.23
SCAF4-206ENST00000485790 APPBP2Q92624 585 aa16.46■□□□□ 0.23
SCAF4-206ENST00000485790 GDF15Q99988 308 aa16.46■□□□□ 0.23
SCAF4-206ENST00000485790 NACAP1Q9BZK3 213 aa16.46■□□□□ 0.23
SCAF4-206ENST00000485790 PATL2C9JE40 543 aaKnown RBP16.45■□□□□ 0.22
SCAF4-206ENST00000485790 SLC3A2P08195 630 aaKnown RBP16.45■□□□□ 0.22
SCAF4-206ENST00000485790 COPB2P35606 906 aa16.45■□□□□ 0.22
SCAF4-206ENST00000485790 STAT3P40763 770 aa16.45■□□□□ 0.22
SCAF4-206ENST00000485790 KCTD2Q14681 263 aa16.45■□□□□ 0.22
SCAF4-206ENST00000485790 KIAA1755Q5JYT7 1200 aa16.45■□□□□ 0.22
SCAF4-206ENST00000485790 ATG4CQ96DT6 458 aa16.45■□□□□ 0.22
SCAF4-206ENST00000485790 PRKAG2Q9UGJ0 569 aa16.45■□□□□ 0.22
SCAF4-206ENST00000485790 CTDP1Q9Y5B0 961 aaPredicted RBP16.45■□□□□ 0.22
SCAF4-206ENST00000485790 MGAMO43451 1857 aa16.45■□□□□ 0.22
SCAF4-206ENST00000485790 PTPRFP10586 1907 aa16.45■□□□□ 0.22
SCAF4-206ENST00000485790 GSG1L2A8MUP6 293 aa16.44■□□□□ 0.22
SCAF4-206ENST00000485790 DNM1LO00429 736 aa16.44■□□□□ 0.22
SCAF4-206ENST00000485790 SYN1P17600 705 aa16.44■□□□□ 0.22
SCAF4-206ENST00000485790 TDO2P48775 406 aa16.44■□□□□ 0.22
SCAF4-206ENST00000485790 LBHD1Q9BQE6 289 aaPredicted RBP16.44■□□□□ 0.22
SCAF4-206ENST00000485790 UBE2OQ9C0C9 1292 aaKnown RBP16.44■□□□□ 0.22
SCAF4-206ENST00000485790 ADAMTS5Q9UNA0 930 aa16.44■□□□□ 0.22
SCAF4-206ENST00000485790 VWA5AO00534 786 aa16.43■□□□□ 0.22
SCAF4-206ENST00000485790 SEPT4O43236 478 aa16.43■□□□□ 0.22
SCAF4-206ENST00000485790 COBLO75128 1261 aa16.43■□□□□ 0.22
SCAF4-206ENST00000485790 CHGBP05060 677 aa16.43■□□□□ 0.22
SCAF4-206ENST00000485790 MAGEA10P43363 369 aaPredicted RBP16.43■□□□□ 0.22
SCAF4-206ENST00000485790 TMEM132BQ14DG7 1078 aa16.43■□□□□ 0.22
SCAF4-206ENST00000485790 OSBP2Q969R2 916 aa16.43■□□□□ 0.22
SCAF4-206ENST00000485790 MMP19Q99542 508 aa16.43■□□□□ 0.22
SCAF4-206ENST00000485790 NYAP2Q9P242 653 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms