RNA–Protein interactions for RNA: ENST00000485737.1

SMARCC1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 4

Gene SMARCC1, Length 631 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-206ENST00000485737 GJA3Q9Y6H8 435 aa5.43□□□□□ -1.54
SMARCC1-206ENST00000485737 CARMIL3Q8ND23 1372 aa5.42□□□□□ -1.54
SMARCC1-206ENST00000485737 FAM237AA0A1B0GTK4 181 aa5.42□□□□□ -1.54
SMARCC1-206ENST00000485737 PALM3A6NDB9 673 aaPredicted RBP5.42□□□□□ -1.54
SMARCC1-206ENST00000485737 TADA3O75528 432 aa5.42□□□□□ -1.54
SMARCC1-206ENST00000485737 CTDNEP1O95476 244 aa5.42□□□□□ -1.54
SMARCC1-206ENST00000485737 YEATS4O95619 227 aa5.42□□□□□ -1.54
SMARCC1-206ENST00000485737 DDX58O95786 925 aaKnown RBP5.42□□□□□ -1.54
SMARCC1-206ENST00000485737 TPM1P09493 284 aa5.42□□□□□ -1.54
SMARCC1-206ENST00000485737 PNMA6AP0CW24 399 aaPredicted RBP5.42□□□□□ -1.54
SMARCC1-206ENST00000485737 ATP4AP20648 1035 aa5.42□□□□□ -1.54
SMARCC1-206ENST00000485737 RASA1P20936 1047 aa5.42□□□□□ -1.54
SMARCC1-206ENST00000485737 SFPQP23246 707 aaKnown RBP eCLIP5.42□□□□□ -1.54
SMARCC1-206ENST00000485737 ETF1P62495 437 aaKnown RBP5.42□□□□□ -1.54
SMARCC1-206ENST00000485737 TPM4P67936 248 aa5.42□□□□□ -1.54
SMARCC1-206ENST00000485737 EXOSC10Q01780 885 aaKnown RBP5.42□□□□□ -1.54
SMARCC1-206ENST00000485737 LBRQ14739 615 aaKnown RBP5.42□□□□□ -1.54
SMARCC1-206ENST00000485737 MTFR1Q15390 333 aa5.42□□□□□ -1.54
SMARCC1-206ENST00000485737 ADALQ6DHV7 355 aa5.42□□□□□ -1.54
SMARCC1-206ENST00000485737 ARMCX5Q6P1M9 558 aa5.42□□□□□ -1.54
SMARCC1-206ENST00000485737 BICDL1Q6ZP65 573 aa5.42□□□□□ -1.54
SMARCC1-206ENST00000485737 Q6ZUG5 572 aa5.42□□□□□ -1.54
SMARCC1-206ENST00000485737 NGDNQ8NEJ9 315 aaKnown RBP5.42□□□□□ -1.54
SMARCC1-206ENST00000485737 DDX54Q8TDD1 881 aaKnown RBP5.42□□□□□ -1.54
SMARCC1-206ENST00000485737 KCNG4Q8TDN1 519 aa5.42□□□□□ -1.54
SMARCC1-206ENST00000485737 IP6K1Q92551 441 aa5.42□□□□□ -1.54
SMARCC1-206ENST00000485737 TCEANC2Q96MN5 208 aa5.42□□□□□ -1.54
SMARCC1-206ENST00000485737 USP28Q96RU2 1077 aa5.42□□□□□ -1.54
SMARCC1-206ENST00000485737 DSCC1Q9BVC3 393 aa5.42□□□□□ -1.54
SMARCC1-206ENST00000485737 BICC1Q9H694 974 aaKnown RBP5.42□□□□□ -1.54
SMARCC1-206ENST00000485737 ARGLU1Q9NWB6 273 aaPredicted RBP5.42□□□□□ -1.54
SMARCC1-206ENST00000485737 ZKSCAN7Q9P0L1 754 aaPredicted RBP5.42□□□□□ -1.54
SMARCC1-206ENST00000485737 SCHIP1Q9P0W5 487 aaPredicted RBP5.42□□□□□ -1.54
SMARCC1-206ENST00000485737 ORC3Q9UBD5 711 aaPredicted RBP5.42□□□□□ -1.54
SMARCC1-206ENST00000485737 IQSEC3Q9UPP2 1182 aaPredicted RBP5.42□□□□□ -1.54
SMARCC1-206ENST00000485737 MAFBQ9Y5Q3 323 aaPredicted RBP5.42□□□□□ -1.54
SMARCC1-206ENST00000485737 C5P01031 1676 aa5.42□□□□□ -1.54
SMARCC1-206ENST00000485737 KIF1AQ12756 1690 aa5.42□□□□□ -1.54
SMARCC1-206ENST00000485737 MAP3K15Q6ZN16 1313 aa5.42□□□□□ -1.54
SMARCC1-206ENST00000485737 RGPD8O14715 1765 aaPredicted RBP5.42□□□□□ -1.54
SMARCC1-206ENST00000485737 GLI3P10071 1580 aa5.42□□□□□ -1.54
SMARCC1-206ENST00000485737 A0A0U1RQG5 324 aaPredicted RBP5.41□□□□□ -1.54
SMARCC1-206ENST00000485737 A0A1W2PNR3 127 aa5.41□□□□□ -1.54
SMARCC1-206ENST00000485737 GOLGA6L9A6NEM1 432 aa5.41□□□□□ -1.54
SMARCC1-206ENST00000485737 BTBD11A6QL63 1104 aa5.41□□□□□ -1.54
SMARCC1-206ENST00000485737 SFI1A8K8P3 1242 aa5.41□□□□□ -1.54
SMARCC1-206ENST00000485737 EFCAB8A8MWE9 144 aa5.41□□□□□ -1.54
SMARCC1-206ENST00000485737 IGSF3O75054 1194 aa5.41□□□□□ -1.54
SMARCC1-206ENST00000485737 CELA2BP08218 269 aaPredicted RBP5.41□□□□□ -1.54
SMARCC1-206ENST00000485737 CYP21A2P08686 494 aa5.41□□□□□ -1.54
SMARCC1-206ENST00000485737 HSP90B1P14625 803 aaKnown RBP5.41□□□□□ -1.54
SMARCC1-206ENST00000485737 EIF2S2P20042 333 aaKnown RBP5.41□□□□□ -1.54
SMARCC1-206ENST00000485737 LTKP29376 864 aa5.41□□□□□ -1.54
SMARCC1-206ENST00000485737 RFX5P48382 616 aaPredicted RBP5.41□□□□□ -1.54
SMARCC1-206ENST00000485737 NLRP12P59046 1061 aa5.41□□□□□ -1.54
SMARCC1-206ENST00000485737 STK3Q13188 491 aa5.41□□□□□ -1.54
SMARCC1-206ENST00000485737 NCAPHQ15003 741 aa5.41□□□□□ -1.54
SMARCC1-206ENST00000485737 PROSER3Q2NL68 480 aa5.41□□□□□ -1.54
SMARCC1-206ENST00000485737 LRRFIP1Q32MZ4 808 aaKnown RBP5.41□□□□□ -1.54
SMARCC1-206ENST00000485737 DPCR1Q3MIW9 517 aa5.41□□□□□ -1.54
SMARCC1-206ENST00000485737 RABL6Q3YEC7 729 aaPredicted RBP5.41□□□□□ -1.54
SMARCC1-206ENST00000485737 MCMDC2Q4G0Z9 681 aa5.41□□□□□ -1.54
SMARCC1-206ENST00000485737 AMOTQ4VCS5 1084 aa5.41□□□□□ -1.54
SMARCC1-206ENST00000485737 CCDC158Q5M9N0 1113 aa5.41□□□□□ -1.54
SMARCC1-206ENST00000485737 STOX1Q6ZVD7 989 aa5.41□□□□□ -1.54
SMARCC1-206ENST00000485737 DHX32Q7L7V1 743 aaKnown RBP5.41□□□□□ -1.54
SMARCC1-206ENST00000485737 BRAPQ7Z569 592 aa5.41□□□□□ -1.54
SMARCC1-206ENST00000485737 TXLNBQ8N3L3 684 aa5.41□□□□□ -1.54
SMARCC1-206ENST00000485737 LARGE2Q8N3Y3 721 aa5.41□□□□□ -1.54
SMARCC1-206ENST00000485737 MSL3Q8N5Y2 521 aaKnown RBP5.41□□□□□ -1.54
SMARCC1-206ENST00000485737 NEDD1Q8NHV4 660 aa5.41□□□□□ -1.54
SMARCC1-206ENST00000485737 C1orf216Q8TAB5 229 aa5.41□□□□□ -1.54
SMARCC1-206ENST00000485737 ZNF274Q96GC6 653 aaPredicted RBP5.41□□□□□ -1.54
SMARCC1-206ENST00000485737 HAUS7Q99871 368 aa5.41□□□□□ -1.54
SMARCC1-206ENST00000485737 NOL10Q9BSC4 688 aaKnown RBP5.41□□□□□ -1.54
SMARCC1-206ENST00000485737 CFHR5Q9BXR6 569 aa5.41□□□□□ -1.54
SMARCC1-206ENST00000485737 PPP1R12CQ9BZL4 782 aa5.41□□□□□ -1.54
SMARCC1-206ENST00000485737 XPO4Q9C0E2 1151 aaKnown RBP5.41□□□□□ -1.54
SMARCC1-206ENST00000485737 CRISPLD1Q9H336 500 aa5.41□□□□□ -1.54
SMARCC1-206ENST00000485737 TMX1Q9H3N1 280 aa5.41□□□□□ -1.54
SMARCC1-206ENST00000485737 DDX21Q9NR30 783 aaKnown RBP eCLIP5.41□□□□□ -1.54
SMARCC1-206ENST00000485737 HELLSQ9NRZ9 838 aa5.41□□□□□ -1.54
SMARCC1-206ENST00000485737 DBNLQ9UJU6 430 aaKnown RBP5.41□□□□□ -1.54
SMARCC1-206ENST00000485737 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.41□□□□□ -1.54
SMARCC1-206ENST00000485737 V9GYY5 206 aaPredicted RBP5.41□□□□□ -1.54
SMARCC1-206ENST00000485737 MST1RQ04912 1400 aa5.4□□□□□ -1.54
SMARCC1-206ENST00000485737 LAMB4A4D0S4 1761 aa5.4□□□□□ -1.54
SMARCC1-206ENST00000485737 LAMA4Q16363 1823 aa5.4□□□□□ -1.54
SMARCC1-206ENST00000485737 DCDC2BA2VCK2 349 aa5.4□□□□□ -1.54
SMARCC1-206ENST00000485737 RNMTO43148 476 aaKnown RBP5.4□□□□□ -1.54
SMARCC1-206ENST00000485737 CBFA2T2O43439 604 aa5.4□□□□□ -1.54
SMARCC1-206ENST00000485737 KCNQ3O43525 872 aa5.4□□□□□ -1.54
SMARCC1-206ENST00000485737 BNIP3LO60238 219 aa5.4□□□□□ -1.54
SMARCC1-206ENST00000485737 DTNBO60941 627 aa5.4□□□□□ -1.54
SMARCC1-206ENST00000485737 IGKV5-2P06315 115 aa5.4□□□□□ -1.54
SMARCC1-206ENST00000485737 BMP4P12644 408 aa5.4□□□□□ -1.54
SMARCC1-206ENST00000485737 FGFR3P22607 806 aa5.4□□□□□ -1.54
SMARCC1-206ENST00000485737 LMOD1P29536 600 aaPredicted RBP5.4□□□□□ -1.54
SMARCC1-206ENST00000485737 TXLNAP40222 546 aa5.4□□□□□ -1.54
SMARCC1-206ENST00000485737 ME1P48163 572 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms