RNA–Protein interactions for RNA: ENST00000485424.1

UBA3-210, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 652 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-210ENST00000485424 USP17L22D6RA61 530 aa16■□□□□ 0.15
UBA3-210ENST00000485424 USP17L17D6RBQ6 530 aa16■□□□□ 0.15
UBA3-210ENST00000485424 USP17L19D6RCP7 530 aa16■□□□□ 0.15
UBA3-210ENST00000485424 USP17L20D6RJB6 530 aa16■□□□□ 0.15
UBA3-210ENST00000485424 SYN1P17600 705 aa16■□□□□ 0.15
UBA3-210ENST00000485424 CCND3P30281 292 aaPredicted RBP16■□□□□ 0.15
UBA3-210ENST00000485424 USP17L24Q0WX57 530 aa16■□□□□ 0.15
UBA3-210ENST00000485424 DDRGK1Q96HY6 314 aa16■□□□□ 0.15
UBA3-210ENST00000485424 RIOK1Q9BRS2 568 aaKnown RBP16■□□□□ 0.15
UBA3-210ENST00000485424 BOLA2Q9H3K6 86 aa16■□□□□ 0.15
UBA3-210ENST00000485424 PAG1Q9NWQ8 432 aa16■□□□□ 0.15
UBA3-210ENST00000485424 COL6A1P12109 1028 aa15.99■□□□□ 0.15
UBA3-210ENST00000485424 VCAM1P19320 739 aa15.99■□□□□ 0.15
UBA3-210ENST00000485424 MAGEA10P43363 369 aaPredicted RBP15.99■□□□□ 0.15
UBA3-210ENST00000485424 CCNA1P78396 465 aa15.99■□□□□ 0.15
UBA3-210ENST00000485424 WDR78Q5VTH9 848 aa15.99■□□□□ 0.15
UBA3-210ENST00000485424 LHX8Q68G74 356 aa15.99■□□□□ 0.15
UBA3-210ENST00000485424 KIAA1683Q9H0B3 1180 aa15.99■□□□□ 0.15
UBA3-210ENST00000485424 RABGAP1Q9Y3P9 1069 aa15.99■□□□□ 0.15
UBA3-210ENST00000485424 GLRX3O76003 335 aaKnown RBP15.98■□□□□ 0.15
UBA3-210ENST00000485424 SHMT1P34896 483 aa15.98■□□□□ 0.15
UBA3-210ENST00000485424 PLCD1P51178 756 aa15.98■□□□□ 0.15
UBA3-210ENST00000485424 MAP2K5Q13163 448 aa15.98■□□□□ 0.15
UBA3-210ENST00000485424 ZSCAN25Q6NSZ9 544 aa15.98■□□□□ 0.15
UBA3-210ENST00000485424 CATSPERGQ6ZRH7 1159 aa15.98■□□□□ 0.15
UBA3-210ENST00000485424 SIRT2Q8IXJ6 389 aa15.98■□□□□ 0.15
UBA3-210ENST00000485424 ACER1Q8TDN7 264 aa15.98■□□□□ 0.15
UBA3-210ENST00000485424 SDR42E1Q8WUS8 393 aa15.98■□□□□ 0.15
UBA3-210ENST00000485424 LRRCC1Q9C099 1032 aa15.98■□□□□ 0.15
UBA3-210ENST00000485424 ATP5JP18859 108 aa15.97■□□□□ 0.15
UBA3-210ENST00000485424 GUCY1A2P33402 732 aa15.97■□□□□ 0.15
UBA3-210ENST00000485424 LBX2Q6XYB7 198 aa15.97■□□□□ 0.15
UBA3-210ENST00000485424 LCORLQ8N3X6 602 aa15.97■□□□□ 0.15
UBA3-210ENST00000485424 EDC3Q96F86 508 aaKnown RBP15.97■□□□□ 0.15
UBA3-210ENST00000485424 ARMT1Q9H993 441 aa15.97■□□□□ 0.15
UBA3-210ENST00000485424 FLRT1Q9NZU1 646 aa15.97■□□□□ 0.15
UBA3-210ENST00000485424 SWAP70Q9UH65 585 aa15.97■□□□□ 0.15
UBA3-210ENST00000485424 CDH23Q9H251 3354 aa15.96■□□□□ 0.15
UBA3-210ENST00000485424 SPDYE16A6NNV3 312 aaPredicted RBP15.96■□□□□ 0.15
UBA3-210ENST00000485424 MBD4O95243 580 aa15.96■□□□□ 0.15
UBA3-210ENST00000485424 ADD2P35612 726 aa15.96■□□□□ 0.15
UBA3-210ENST00000485424 LRRC26Q2I0M4 334 aa15.96■□□□□ 0.15
UBA3-210ENST00000485424 TDHQ8IZJ6 230 aa15.96■□□□□ 0.15
UBA3-210ENST00000485424 GPATCH3Q96I76 525 aa15.96■□□□□ 0.15
UBA3-210ENST00000485424 DCP1AQ9NPI6 582 aaPredicted RBP15.96■□□□□ 0.15
UBA3-210ENST00000485424 ATP8A2Q9NTI2 1148 aa15.96■□□□□ 0.15
UBA3-210ENST00000485424 BTBD7Q9P203 1132 aa15.96■□□□□ 0.15
UBA3-210ENST00000485424 IVNS1ABPQ9Y6Y0 642 aa15.96■□□□□ 0.15
UBA3-210ENST00000485424 PRUNE2Q8WUY3 3088 aa15.96■□□□□ 0.15
UBA3-210ENST00000485424 TCRBV5S4A2TA0A5A2 114 aa15.95■□□□□ 0.14
UBA3-210ENST00000485424 SLC15A5A6NIM6 579 aa15.95■□□□□ 0.14
UBA3-210ENST00000485424 PTPREP23469 700 aa15.95■□□□□ 0.14
UBA3-210ENST00000485424 GABPAQ06546 454 aa15.95■□□□□ 0.14
UBA3-210ENST00000485424 GRB14Q14449 540 aa15.95■□□□□ 0.14
UBA3-210ENST00000485424 SEPT2Q15019 361 aa15.95■□□□□ 0.14
UBA3-210ENST00000485424 HAUS7Q99871 368 aa15.95■□□□□ 0.14
UBA3-210ENST00000485424 RPAP3Q9H6T3 665 aaPredicted RBP15.95■□□□□ 0.14
UBA3-210ENST00000485424 ARHGEF10LQ9HCE6 1279 aa15.95■□□□□ 0.14
UBA3-210ENST00000485424 LRIT3Q3SXY7 679 aa15.94■□□□□ 0.14
UBA3-210ENST00000485424 GPR153Q6NV75 609 aa15.94■□□□□ 0.14
UBA3-210ENST00000485424 TMEM179Q6ZVK1 233 aa15.94■□□□□ 0.14
UBA3-210ENST00000485424 TANGO6Q9C0B7 1094 aa15.94■□□□□ 0.14
UBA3-210ENST00000485424 SH2D4AQ9H788 454 aa15.94■□□□□ 0.14
UBA3-210ENST00000485424 GBF1Q92538 1859 aa15.93■□□□□ 0.14
UBA3-210ENST00000485424 SMARCA5O60264 1052 aaPredicted RBP15.93■□□□□ 0.14
UBA3-210ENST00000485424 HOXC6P09630 235 aa15.93■□□□□ 0.14
UBA3-210ENST00000485424 C20orf194Q5TEA3 1177 aa15.93■□□□□ 0.14
UBA3-210ENST00000485424 MFSD14CQ5VZR4 134 aa15.93■□□□□ 0.14
UBA3-210ENST00000485424 NPLOC4Q8TAT6 608 aa15.93■□□□□ 0.14
UBA3-210ENST00000485424 UBE2OQ9C0C9 1292 aaKnown RBP15.93■□□□□ 0.14
UBA3-210ENST00000485424 SLC4A4Q9Y6R1 1079 aa15.93■□□□□ 0.14
UBA3-210ENST00000485424 A0A1W2PRG0 241 aa15.92■□□□□ 0.14
UBA3-210ENST00000485424 IGHA2P01877 340 aa15.92■□□□□ 0.14
UBA3-210ENST00000485424 CYP2D6P10635 497 aa15.92■□□□□ 0.14
UBA3-210ENST00000485424 UBE3CQ15386 1083 aa15.92■□□□□ 0.14
UBA3-210ENST00000485424 Q7L0L9 218 aa15.92■□□□□ 0.14
UBA3-210ENST00000485424 DEFB123Q8N688 67 aa15.92■□□□□ 0.14
UBA3-210ENST00000485424 SLC17A8Q8NDX2 589 aa15.92■□□□□ 0.14
UBA3-210ENST00000485424 SPDYE1Q8NFV5 336 aaPredicted RBP15.92■□□□□ 0.14
UBA3-210ENST00000485424 DDX20Q9UHI6 824 aaKnown RBP15.92■□□□□ 0.14
UBA3-210ENST00000485424 PRKAB2O43741 272 aa15.91■□□□□ 0.14
UBA3-210ENST00000485424 ATP2B2Q01814 1243 aa15.91■□□□□ 0.14
UBA3-210ENST00000485424 ICA1Q05084 483 aa15.91■□□□□ 0.14
UBA3-210ENST00000485424 COG2Q14746 738 aa15.91■□□□□ 0.14
UBA3-210ENST00000485424 SLC44A5Q8NCS7 719 aa15.91■□□□□ 0.14
UBA3-210ENST00000485424 TRPV1Q8NER1 839 aa15.91■□□□□ 0.14
UBA3-210ENST00000485424 DYNLL2Q96FJ2 89 aa15.91■□□□□ 0.14
UBA3-210ENST00000485424 CCDC17Q96LX7 622 aa15.91■□□□□ 0.14
UBA3-210ENST00000485424 ECHDC1Q9NTX5 307 aa15.91■□□□□ 0.14
UBA3-210ENST00000485424 HOXC10Q9NYD6 342 aa15.91■□□□□ 0.14
UBA3-210ENST00000485424 RAD21O60216 631 aa15.9■□□□□ 0.14
UBA3-210ENST00000485424 MSCO60682 206 aa15.9■□□□□ 0.14
UBA3-210ENST00000485424 CYBAP13498 195 aa15.9■□□□□ 0.14
UBA3-210ENST00000485424 CNGA1P29973 690 aa15.9■□□□□ 0.14
UBA3-210ENST00000485424 CYP2C19P33261 490 aa15.9■□□□□ 0.14
UBA3-210ENST00000485424 MDM2Q00987 491 aaPredicted RBP15.9■□□□□ 0.14
UBA3-210ENST00000485424 SLFNL1Q499Z3 407 aa15.9■□□□□ 0.14
UBA3-210ENST00000485424 KIAA1755Q5JYT7 1200 aa15.9■□□□□ 0.14
UBA3-210ENST00000485424 CLEC10AQ8IUN9 316 aa15.9■□□□□ 0.14
UBA3-210ENST00000485424 LPAR1Q92633 364 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms