RNA–Protein interactions for RNA: ENST00000485275.2

LRIF1-202, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRIF1, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-202ENST00000485275 PNMA8AQ86V59 439 aaPredicted RBP16.96■□□□□ 0.31
LRIF1-202ENST00000485275 ACER1Q8TDN7 264 aa16.96■□□□□ 0.31
LRIF1-202ENST00000485275 CDCA5Q96FF9 252 aa16.96■□□□□ 0.31
LRIF1-202ENST00000485275 ZNF341Q9BYN7 854 aa16.96■□□□□ 0.31
LRIF1-202ENST00000485275 CWC22Q9HCG8 908 aaKnown RBP16.96■□□□□ 0.31
LRIF1-202ENST00000485275 MYH6P13533 1939 aa16.96■□□□□ 0.3
LRIF1-202ENST00000485275 USP17L5A8MUK1 530 aa16.95■□□□□ 0.3
LRIF1-202ENST00000485275 GOLGA8HP0CJ92 632 aa16.95■□□□□ 0.3
LRIF1-202ENST00000485275 SNHG28P0DPA3 235 aa16.95■□□□□ 0.3
LRIF1-202ENST00000485275 PRKG1Q13976 671 aa16.95■□□□□ 0.3
LRIF1-202ENST00000485275 MAP1SQ66K74 1059 aaPredicted RBP16.95■□□□□ 0.3
LRIF1-202ENST00000485275 USP17L2Q6R6M4 530 aa16.95■□□□□ 0.3
LRIF1-202ENST00000485275 TMTC3Q6ZXV5 915 aa16.95■□□□□ 0.3
LRIF1-202ENST00000485275 ZKSCAN4Q969J2 545 aaPredicted RBP16.95■□□□□ 0.3
LRIF1-202ENST00000485275 MKL1Q969V6 931 aa16.95■□□□□ 0.3
LRIF1-202ENST00000485275 KLRG1Q96E93 195 aa16.95■□□□□ 0.3
LRIF1-202ENST00000485275 WRNIP1Q96S55 665 aa16.95■□□□□ 0.3
LRIF1-202ENST00000485275 CABP5Q9NP86 173 aa16.95■□□□□ 0.3
LRIF1-202ENST00000485275 CNTNAP5Q8WYK1 1306 aa16.95■□□□□ 0.3
LRIF1-202ENST00000485275 CPLX1O14810 134 aa16.94■□□□□ 0.3
LRIF1-202ENST00000485275 CALM1P0DP23 149 aa16.94■□□□□ 0.3
LRIF1-202ENST00000485275 CALM2P0DP24 149 aa16.94■□□□□ 0.3
LRIF1-202ENST00000485275 CALM3P0DP25 149 aa16.94■□□□□ 0.3
LRIF1-202ENST00000485275 VEGFAP15692 232 aaPredicted RBP16.94■□□□□ 0.3
LRIF1-202ENST00000485275 IFNAR1P17181 557 aa16.94■□□□□ 0.3
LRIF1-202ENST00000485275 SYT1P21579 422 aa16.94■□□□□ 0.3
LRIF1-202ENST00000485275 KIAA1755Q5JYT7 1200 aa16.94■□□□□ 0.3
LRIF1-202ENST00000485275 DCAF15Q66K64 600 aa16.94■□□□□ 0.3
LRIF1-202ENST00000485275 CCDC82Q8N4S0 544 aa16.94■□□□□ 0.3
LRIF1-202ENST00000485275 SRBD1Q8N5C6 995 aaKnown RBP16.94■□□□□ 0.3
LRIF1-202ENST00000485275 AIFM3Q96NN9 605 aa16.94■□□□□ 0.3
LRIF1-202ENST00000485275 CPVLQ9H3G5 476 aa16.94■□□□□ 0.3
LRIF1-202ENST00000485275 BAZ2BQ9UIF8 2168 aaKnown RBP16.94■□□□□ 0.3
LRIF1-202ENST00000485275 PALM3A6NDB9 673 aaPredicted RBP16.94■□□□□ 0.3
LRIF1-202ENST00000485275 USP2O75604 605 aaPredicted RBP16.94■□□□□ 0.3
LRIF1-202ENST00000485275 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.94■□□□□ 0.3
LRIF1-202ENST00000485275 MAP3K14Q99558 947 aa16.94■□□□□ 0.3
LRIF1-202ENST00000485275 CHMP5Q9NZZ3 219 aa16.94■□□□□ 0.3
LRIF1-202ENST00000485275 DCAF8L1A6NGE4 600 aa16.93■□□□□ 0.3
LRIF1-202ENST00000485275 TRAF5O00463 557 aa16.93■□□□□ 0.3
LRIF1-202ENST00000485275 CYTH3O43739 400 aa16.93■□□□□ 0.3
LRIF1-202ENST00000485275 DHX16O60231 1041 aaKnown RBP16.93■□□□□ 0.3
LRIF1-202ENST00000485275 CTNND1O60716 968 aaKnown RBP16.93■□□□□ 0.3
LRIF1-202ENST00000485275 ASNSP08243 561 aa16.93■□□□□ 0.3
LRIF1-202ENST00000485275 CTCFLQ8NI51 663 aaPredicted RBP16.93■□□□□ 0.3
LRIF1-202ENST00000485275 SHISA4Q96DD7 197 aa16.93■□□□□ 0.3
LRIF1-202ENST00000485275 GJB4Q9NTQ9 266 aa16.93■□□□□ 0.3
LRIF1-202ENST00000485275 RBM28Q9NW13 759 aaKnown RBP16.93■□□□□ 0.3
LRIF1-202ENST00000485275 CIZ1Q9ULV3 898 aaPredicted RBP16.93■□□□□ 0.3
LRIF1-202ENST00000485275 FRMPD2Q68DX3 1309 aaPredicted RBP16.93■□□□□ 0.3
LRIF1-202ENST00000485275 hCG_1642624A0A1W2PR95 340 aa16.92■□□□□ 0.3
LRIF1-202ENST00000485275 FMNL1O95466 1100 aaPredicted RBP16.92■□□□□ 0.3
LRIF1-202ENST00000485275 SUPT20HL1Q3ZLR7 823 aa16.92■□□□□ 0.3
LRIF1-202ENST00000485275 MOB2Q70IA6 237 aa16.92■□□□□ 0.3
LRIF1-202ENST00000485275 SCYL3Q8IZE3 742 aa16.92■□□□□ 0.3
LRIF1-202ENST00000485275 SLC26A6Q9BXS9 759 aa16.92■□□□□ 0.3
LRIF1-202ENST00000485275 ORC3Q9UBD5 711 aaPredicted RBP16.92■□□□□ 0.3
LRIF1-202ENST00000485275 STK36Q9NRP7 1315 aa16.92■□□□□ 0.3
LRIF1-202ENST00000485275 FOSBP53539 338 aa16.92■□□□□ 0.3
LRIF1-202ENST00000485275 HMGN5P82970 282 aaKnown RBP16.92■□□□□ 0.3
LRIF1-202ENST00000485275 DGKZQ13574 1117 aa16.92■□□□□ 0.3
LRIF1-202ENST00000485275 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.92■□□□□ 0.3
LRIF1-202ENST00000485275 CDC37L1Q7L3B6 337 aa16.92■□□□□ 0.3
LRIF1-202ENST00000485275 HOOK2Q96ED9 719 aa16.92■□□□□ 0.3
LRIF1-202ENST00000485275 CLEC11AQ9Y240 323 aa16.92■□□□□ 0.3
LRIF1-202ENST00000485275 CCDC196A0A1B0GTZ2 297 aa16.91■□□□□ 0.3
LRIF1-202ENST00000485275 BRD1O95696 1058 aa16.91■□□□□ 0.3
LRIF1-202ENST00000485275 NDUFB10O96000 172 aa16.91■□□□□ 0.3
LRIF1-202ENST00000485275 ZNF543Q08ER8 600 aa16.91■□□□□ 0.3
LRIF1-202ENST00000485275 PPP2R5BQ15173 497 aa16.91■□□□□ 0.3
LRIF1-202ENST00000485275 PKN1Q16512 942 aa16.91■□□□□ 0.3
LRIF1-202ENST00000485275 GMCL1P1Q8NEA9 526 aa16.91■□□□□ 0.3
LRIF1-202ENST00000485275 NUP88Q99567 741 aaPredicted RBP16.91■□□□□ 0.3
LRIF1-202ENST00000485275 MTMR6Q9Y217 621 aa16.91■□□□□ 0.3
LRIF1-202ENST00000485275 TMX2Q9Y320 296 aa16.91■□□□□ 0.3
LRIF1-202ENST00000485275 F5H6K3 240 aa16.9■□□□□ 0.3
LRIF1-202ENST00000485275 STX6O43752 255 aa16.9■□□□□ 0.3
LRIF1-202ENST00000485275 CDKL5O76039 1030 aa16.9■□□□□ 0.3
LRIF1-202ENST00000485275 PARP1P09874 1014 aaKnown RBP16.9■□□□□ 0.3
LRIF1-202ENST00000485275 KLRC3Q07444 240 aa16.9■□□□□ 0.3
LRIF1-202ENST00000485275 FOXD4L5Q5VV16 416 aaPredicted RBP16.9■□□□□ 0.3
LRIF1-202ENST00000485275 TTBK2Q6IQ55 1244 aa16.9■□□□□ 0.3
LRIF1-202ENST00000485275 KCTD1Q719H9 257 aa16.9■□□□□ 0.3
LRIF1-202ENST00000485275 FOXD4L4Q8WXT5 416 aaPredicted RBP16.9■□□□□ 0.3
LRIF1-202ENST00000485275 SNCAIPQ9Y6H5 919 aa16.9■□□□□ 0.3
LRIF1-202ENST00000485275 PTPRFP10586 1907 aa16.9■□□□□ 0.3
LRIF1-202ENST00000485275 KLRF2D3W0D1 207 aa16.89■□□□□ 0.3
LRIF1-202ENST00000485275 PTPRAP18433 802 aa16.89■□□□□ 0.3
LRIF1-202ENST00000485275 KIF5BP33176 963 aa16.89■□□□□ 0.3
LRIF1-202ENST00000485275 VGLL4Q14135 290 aa16.89■□□□□ 0.3
LRIF1-202ENST00000485275 ZYXQ15942 572 aaKnown RBP16.89■□□□□ 0.3
LRIF1-202ENST00000485275 PPP4R3BQ5MIZ7 849 aa16.89■□□□□ 0.3
LRIF1-202ENST00000485275 NOL9Q5SY16 702 aaKnown RBP16.89■□□□□ 0.3
LRIF1-202ENST00000485275 LARP1BQ659C4 914 aaKnown RBP16.89■□□□□ 0.3
LRIF1-202ENST00000485275 SLFN13Q68D06 897 aa16.89■□□□□ 0.3
LRIF1-202ENST00000485275 OTUD7BQ6GQQ9 843 aa16.89■□□□□ 0.3
LRIF1-202ENST00000485275 LDHDQ86WU2 507 aa16.89■□□□□ 0.3
LRIF1-202ENST00000485275 SPICE1Q8N0Z3 855 aa16.89■□□□□ 0.3
LRIF1-202ENST00000485275 CHAMP1Q96JM3 812 aa16.89■□□□□ 0.3
LRIF1-202ENST00000485275 RNF26Q9BY78 433 aaPredicted RBP16.89■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms