RNA–Protein interactions for RNA: ENST00000485124.1

TMEM40-208, Transcript of transmembrane protein 40, humanhuman

TSL 5

Gene TMEM40, Length 927 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM40-208ENST00000485124 GDF15Q99988 308 aa11.93□□□□□ -0.5
TMEM40-208ENST00000485124 DCP1AQ9NPI6 582 aaPredicted RBP11.93□□□□□ -0.5
TMEM40-208ENST00000485124 ATP8A2Q9NTI2 1148 aa11.93□□□□□ -0.5
TMEM40-208ENST00000485124 MCM9Q9NXL9 1143 aa11.93□□□□□ -0.5
TMEM40-208ENST00000485124 HOXC10Q9NYD6 342 aa11.93□□□□□ -0.5
TMEM40-208ENST00000485124 IVNS1ABPQ9Y6Y0 642 aa11.93□□□□□ -0.5
TMEM40-208ENST00000485124 BAZ2AQ9UIF9 1905 aaKnown RBP11.93□□□□□ -0.5
TMEM40-208ENST00000485124 ZNF532Q9HCE3 1301 aa11.92□□□□□ -0.5
TMEM40-208ENST00000485124 SPDYE16A6NNV3 312 aaPredicted RBP11.92□□□□□ -0.5
TMEM40-208ENST00000485124 STRNO43815 780 aa11.92□□□□□ -0.5
TMEM40-208ENST00000485124 ATP5JP18859 108 aa11.92□□□□□ -0.5
TMEM40-208ENST00000485124 PTPREP23469 700 aa11.92□□□□□ -0.5
TMEM40-208ENST00000485124 GRB14Q14449 540 aa11.92□□□□□ -0.5
TMEM40-208ENST00000485124 COG2Q14746 738 aa11.92□□□□□ -0.5
TMEM40-208ENST00000485124 MFSD14CQ5VZR4 134 aa11.92□□□□□ -0.5
TMEM40-208ENST00000485124 SIRT2Q8IXJ6 389 aa11.92□□□□□ -0.5
TMEM40-208ENST00000485124 MB21D1Q8N884 522 aa11.92□□□□□ -0.5
TMEM40-208ENST00000485124 SHCBP1Q8NEM2 672 aa11.92□□□□□ -0.5
TMEM40-208ENST00000485124 ACER1Q8TDN7 264 aa11.92□□□□□ -0.5
TMEM40-208ENST00000485124 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.92□□□□□ -0.5
TMEM40-208ENST00000485124 SH2D4AQ9H788 454 aa11.92□□□□□ -0.5
TMEM40-208ENST00000485124 CWC22Q9HCG8 908 aaKnown RBP11.92□□□□□ -0.5
TMEM40-208ENST00000485124 COL6A3P12111 3177 aa11.91□□□□□ -0.5
TMEM40-208ENST00000485124 PFASO15067 1338 aa11.91□□□□□ -0.5
TMEM40-208ENST00000485124 GOLIM4O00461 696 aa11.91□□□□□ -0.5
TMEM40-208ENST00000485124 PEX10O60683 326 aa11.91□□□□□ -0.5
TMEM40-208ENST00000485124 IGHA2P01877 340 aa11.91□□□□□ -0.5
TMEM40-208ENST00000485124 ADD2P35612 726 aa11.91□□□□□ -0.5
TMEM40-208ENST00000485124 SEPT2Q15019 361 aa11.91□□□□□ -0.5
TMEM40-208ENST00000485124 ZYXQ15942 572 aaKnown RBP11.91□□□□□ -0.5
TMEM40-208ENST00000485124 CCDC17Q96LX7 622 aa11.91□□□□□ -0.5
TMEM40-208ENST00000485124 DNAJC2Q99543 621 aaKnown RBP11.91□□□□□ -0.5
TMEM40-208ENST00000485124 RWDD1Q9H446 243 aaPredicted RBP11.91□□□□□ -0.5
TMEM40-208ENST00000485124 RPAP3Q9H6T3 665 aaPredicted RBP11.91□□□□□ -0.5
TMEM40-208ENST00000485124 PAG1Q9NWQ8 432 aa11.91□□□□□ -0.5
TMEM40-208ENST00000485124 STAP2Q9UGK3 403 aa11.91□□□□□ -0.5
TMEM40-208ENST00000485124 A0A1W2PRG0 241 aa11.9□□□□□ -0.5
TMEM40-208ENST00000485124 UBE3CQ15386 1083 aa11.9□□□□□ -0.5
TMEM40-208ENST00000485124 CCL14Q16627 93 aa11.9□□□□□ -0.5
TMEM40-208ENST00000485124 AMOTL1Q8IY63 956 aa11.9□□□□□ -0.5
TMEM40-208ENST00000485124 C7orf61Q8IZ16 206 aa11.9□□□□□ -0.5
TMEM40-208ENST00000485124 ABRAQ8N0Z2 381 aa11.9□□□□□ -0.5
TMEM40-208ENST00000485124 LCORLQ8N3X6 602 aa11.9□□□□□ -0.5
TMEM40-208ENST00000485124 SDR42E1Q8WUS8 393 aa11.9□□□□□ -0.5
TMEM40-208ENST00000485124 HAUS7Q99871 368 aa11.9□□□□□ -0.5
TMEM40-208ENST00000485124 BTBD7Q9P203 1132 aa11.9□□□□□ -0.5
TMEM40-208ENST00000485124 CCND3P30281 292 aaPredicted RBP11.89□□□□□ -0.51
TMEM40-208ENST00000485124 LRIT3Q3SXY7 679 aa11.89□□□□□ -0.51
TMEM40-208ENST00000485124 OLFML2BQ68BL8 750 aa11.89□□□□□ -0.51
TMEM40-208ENST00000485124 ZSCAN25Q6NSZ9 544 aa11.89□□□□□ -0.51
TMEM40-208ENST00000485124 SMC5Q8IY18 1101 aa11.89□□□□□ -0.51
TMEM40-208ENST00000485124 DDRGK1Q96HY6 314 aa11.89□□□□□ -0.51
TMEM40-208ENST00000485124 SPATC1LQ9H0A9 340 aa11.89□□□□□ -0.51
TMEM40-208ENST00000485124 MROH8Q9H579 483 aa11.89□□□□□ -0.51
TMEM40-208ENST00000485124 ARHGEF10LQ9HCE6 1279 aa11.89□□□□□ -0.51
TMEM40-208ENST00000485124 SLC5A4Q9NY91 659 aa11.89□□□□□ -0.51
TMEM40-208ENST00000485124 DDX20Q9UHI6 824 aaKnown RBP11.89□□□□□ -0.51
TMEM40-208ENST00000485124 TMX2Q9Y320 296 aa11.89□□□□□ -0.51
TMEM40-208ENST00000485124 GREB1LQ9C091 1923 aaPredicted RBP11.89□□□□□ -0.51
TMEM40-208ENST00000485124 ZNFX1Q9P2E3 1918 aaKnown RBP11.89□□□□□ -0.51
TMEM40-208ENST00000485124 MPHOSPH10O00566 681 aaKnown RBP11.88□□□□□ -0.51
TMEM40-208ENST00000485124 WDR46O15213 610 aaKnown RBP11.88□□□□□ -0.51
TMEM40-208ENST00000485124 DSG3P32926 999 aa11.88□□□□□ -0.51
TMEM40-208ENST00000485124 ATP2B2Q01814 1243 aa11.88□□□□□ -0.51
TMEM40-208ENST00000485124 C12orf60Q5U649 245 aa11.88□□□□□ -0.51
TMEM40-208ENST00000485124 C16orf86Q6ZW13 317 aa11.88□□□□□ -0.51
TMEM40-208ENST00000485124 MOV10L1Q9BXT6 1211 aaKnown RBP11.88□□□□□ -0.51
TMEM40-208ENST00000485124 VCPKMTQ9H867 229 aa11.88□□□□□ -0.51
TMEM40-208ENST00000485124 COL11A1P12107 1806 aaPredicted RBP11.88□□□□□ -0.51
TMEM40-208ENST00000485124 LAMA2P24043 3122 aaKnown RBP11.87□□□□□ -0.51
TMEM40-208ENST00000485124 APBB1O00213 710 aa11.87□□□□□ -0.51
TMEM40-208ENST00000485124 DNM1LO00429 736 aa11.87□□□□□ -0.51
TMEM40-208ENST00000485124 MBD4O95243 580 aa11.87□□□□□ -0.51
TMEM40-208ENST00000485124 MAGEA10P43363 369 aaPredicted RBP11.87□□□□□ -0.51
TMEM40-208ENST00000485124 ICA1Q05084 483 aa11.87□□□□□ -0.51
TMEM40-208ENST00000485124 WDR78Q5VTH9 848 aa11.87□□□□□ -0.51
TMEM40-208ENST00000485124 TDHQ8IZJ6 230 aa11.87□□□□□ -0.51
TMEM40-208ENST00000485124 NPLOC4Q8TAT6 608 aa11.87□□□□□ -0.51
TMEM40-208ENST00000485124 LRRCC1Q9C099 1032 aa11.87□□□□□ -0.51
TMEM40-208ENST00000485124 TANGO6Q9C0B7 1094 aa11.87□□□□□ -0.51
TMEM40-208ENST00000485124 BOLA2Q9H3K6 86 aa11.87□□□□□ -0.51
TMEM40-208ENST00000485124 ARMT1Q9H993 441 aa11.87□□□□□ -0.51
TMEM40-208ENST00000485124 FLRT1Q9NZU1 646 aa11.87□□□□□ -0.51
TMEM40-208ENST00000485124 NRBP1Q9UHY1 535 aa11.87□□□□□ -0.51
TMEM40-208ENST00000485124 ZMYND8Q9ULU4 1186 aaPredicted RBP11.87□□□□□ -0.51
TMEM40-208ENST00000485124 ADAMTS5Q9UNA0 930 aa11.87□□□□□ -0.51
TMEM40-208ENST00000485124 SOX1O00570 391 aaPredicted RBP11.86□□□□□ -0.51
TMEM40-208ENST00000485124 SLC25A27O95847 323 aa11.86□□□□□ -0.51
TMEM40-208ENST00000485124 CYBAP13498 195 aa11.86□□□□□ -0.51
TMEM40-208ENST00000485124 AKR1B1P15121 316 aa11.86□□□□□ -0.51
TMEM40-208ENST00000485124 ERCC3P19447 782 aa11.86□□□□□ -0.51
TMEM40-208ENST00000485124 ADORA2AP29274 412 aa11.86□□□□□ -0.51
TMEM40-208ENST00000485124 COPB2P35606 906 aa11.86□□□□□ -0.51
TMEM40-208ENST00000485124 GIMAP6Q6P9H5 292 aa11.86□□□□□ -0.51
TMEM40-208ENST00000485124 DPP9Q86TI2 863 aa11.86□□□□□ -0.51
TMEM40-208ENST00000485124 SIAH1Q8IUQ4 282 aa11.86□□□□□ -0.51
TMEM40-208ENST00000485124 SLC44A5Q8NCS7 719 aa11.86□□□□□ -0.51
TMEM40-208ENST00000485124 KANSL2Q9H9L4 492 aa11.86□□□□□ -0.51
TMEM40-208ENST00000485124 ARPP21Q9UBL0 812 aaPredicted RBP11.86□□□□□ -0.51
TMEM40-208ENST00000485124 PLXNA1Q9UIW2 1896 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms