RNA–Protein interactions for RNA: ENST00000484988.2

SGIP1-211, Transcript of SH3 domain GRB2 like endophilin interacting protein 1, humanhuman

TSL 3

Gene SGIP1, Length 440 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGIP1-211ENST00000484988 NKD1Q969G9 470 aa4.94□□□□□ -1.62
SGIP1-211ENST00000484988 ATG4CQ96DT6 458 aa4.94□□□□□ -1.62
SGIP1-211ENST00000484988 ALPK1Q96QP1 1244 aa4.94□□□□□ -1.62
SGIP1-211ENST00000484988 SPON2Q9BUD6 331 aa4.94□□□□□ -1.62
SGIP1-211ENST00000484988 CNNM2Q9H8M5 875 aa4.94□□□□□ -1.62
SGIP1-211ENST00000484988 GPATCH2Q9NW75 528 aa4.94□□□□□ -1.62
SGIP1-211ENST00000484988 RECKO95980 971 aa4.93□□□□□ -1.62
SGIP1-211ENST00000484988 GBP1P32455 592 aa4.93□□□□□ -1.62
SGIP1-211ENST00000484988 ZNF165P49910 485 aa4.93□□□□□ -1.62
SGIP1-211ENST00000484988 FYB2Q5VWT5 728 aa4.93□□□□□ -1.62
SGIP1-211ENST00000484988 OVOS1Q6IE37 1185 aa4.93□□□□□ -1.62
SGIP1-211ENST00000484988 ZSWIM9Q86XI8 627 aa4.93□□□□□ -1.62
SGIP1-211ENST00000484988 CREG2Q8IUH2 290 aa4.93□□□□□ -1.62
SGIP1-211ENST00000484988 KIAA0825Q8IV33 1275 aa4.93□□□□□ -1.62
SGIP1-211ENST00000484988 CCDC120Q96HB5 630 aa4.93□□□□□ -1.62
SGIP1-211ENST00000484988 DNAJC25-GNG10A0A024R161 153 aa4.92□□□□□ -1.62
SGIP1-211ENST00000484988 ZNF503-AS2A6NEH8 195 aa4.92□□□□□ -1.62
SGIP1-211ENST00000484988 MEIS3P2A8K0S8 358 aa4.92□□□□□ -1.62
SGIP1-211ENST00000484988 IQCJ-SCHIP1C9J366 451 aaPredicted RBP4.92□□□□□ -1.62
SGIP1-211ENST00000484988 RAG1P15918 1043 aa4.92□□□□□ -1.62
SGIP1-211ENST00000484988 RACK1P63244 317 aaKnown RBP4.92□□□□□ -1.62
SGIP1-211ENST00000484988 ZNF394Q53GI3 561 aa4.92□□□□□ -1.62
SGIP1-211ENST00000484988 RALGPS1Q5JS13 557 aa4.92□□□□□ -1.62
SGIP1-211ENST00000484988 GK5Q6ZS86 529 aa4.92□□□□□ -1.62
SGIP1-211ENST00000484988 USP48Q86UV5 1035 aa4.92□□□□□ -1.62
SGIP1-211ENST00000484988 RNF34Q969K3 372 aa4.92□□□□□ -1.62
SGIP1-211ENST00000484988 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.92□□□□□ -1.62
SGIP1-211ENST00000484988 ANTXR1Q9H6X2 564 aa4.92□□□□□ -1.62
SGIP1-211ENST00000484988 SLAMF8Q9P0V8 285 aa4.92□□□□□ -1.62
SGIP1-211ENST00000484988 DUSP13Q9UII6 198 aa4.92□□□□□ -1.62
SGIP1-211ENST00000484988 SHISA3A0PJX4 238 aa4.91□□□□□ -1.62
SGIP1-211ENST00000484988 TNFRSF10CO14798 259 aa4.91□□□□□ -1.62
SGIP1-211ENST00000484988 POLR2BP30876 1174 aaKnown RBP4.91□□□□□ -1.62
SGIP1-211ENST00000484988 MCM4P33991 863 aa4.91□□□□□ -1.62
SGIP1-211ENST00000484988 CCNFP41002 786 aa4.91□□□□□ -1.62
SGIP1-211ENST00000484988 KCNMB1Q16558 191 aa4.91□□□□□ -1.62
SGIP1-211ENST00000484988 LRRFIP1Q32MZ4 808 aaKnown RBP4.91□□□□□ -1.62
SGIP1-211ENST00000484988 NBPF12Q5TAG4 269 aaPredicted RBP4.91□□□□□ -1.62
SGIP1-211ENST00000484988 NLRC3Q7RTR2 1065 aa4.91□□□□□ -1.62
SGIP1-211ENST00000484988 TTC6Q86TZ1 520 aa4.91□□□□□ -1.62
SGIP1-211ENST00000484988 KIRREL1Q96J84 757 aa4.91□□□□□ -1.62
SGIP1-211ENST00000484988 ADAMTS10Q9H324 1103 aa4.91□□□□□ -1.62
SGIP1-211ENST00000484988 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP4.91□□□□□ -1.62
SGIP1-211ENST00000484988 DDX41Q9UJV9 622 aaKnown RBP4.91□□□□□ -1.62
SGIP1-211ENST00000484988 TMEM59LQ9UK28 342 aa4.91□□□□□ -1.62
SGIP1-211ENST00000484988 ZNF281Q9Y2X9 895 aa4.91□□□□□ -1.62
SGIP1-211ENST00000484988 SCAMP3O14828 347 aaKnown RBP4.9□□□□□ -1.63
SGIP1-211ENST00000484988 HPXP02790 462 aa4.9□□□□□ -1.63
SGIP1-211ENST00000484988 GLI1P08151 1106 aa4.9□□□□□ -1.63
SGIP1-211ENST00000484988 NME1P15531 152 aaKnown RBP4.9□□□□□ -1.63
SGIP1-211ENST00000484988 RNF4P78317 190 aa4.9□□□□□ -1.63
SGIP1-211ENST00000484988 EGR3Q06889 387 aa4.9□□□□□ -1.63
SGIP1-211ENST00000484988 RAD51AP2Q09MP3 1159 aa4.9□□□□□ -1.63
SGIP1-211ENST00000484988 NBPF9Q3BBW0 867 aa4.9□□□□□ -1.63
SGIP1-211ENST00000484988 METTL16Q86W50 562 aaKnown RBP4.9□□□□□ -1.63
SGIP1-211ENST00000484988 ENOX1Q8TC92 643 aaKnown RBP4.9□□□□□ -1.63
SGIP1-211ENST00000484988 SP110Q9HB58 689 aa4.9□□□□□ -1.63
SGIP1-211ENST00000484988 PCDHGB7Q9Y5F8 929 aa4.9□□□□□ -1.63
SGIP1-211ENST00000484988 PCDHA11Q9Y5I1 949 aa4.9□□□□□ -1.63
SGIP1-211ENST00000484988 C8AP07357 584 aa4.89□□□□□ -1.63
SGIP1-211ENST00000484988 ZGLP1P0C6A0 271 aa4.89□□□□□ -1.63
SGIP1-211ENST00000484988 YBX3P16989 372 aaKnown RBP eCLIP4.89□□□□□ -1.63
SGIP1-211ENST00000484988 ERVFC1P60507 584 aa4.89□□□□□ -1.63
SGIP1-211ENST00000484988 MESP2Q0VG99 397 aa4.89□□□□□ -1.63
SGIP1-211ENST00000484988 NMIQ13287 307 aaPredicted RBP4.89□□□□□ -1.63
SGIP1-211ENST00000484988 TMEM67Q5HYA8 995 aa4.89□□□□□ -1.63
SGIP1-211ENST00000484988 INTS3Q68E01 1043 aaKnown RBP4.89□□□□□ -1.63
SGIP1-211ENST00000484988 TMEM192Q8IY95 271 aa4.89□□□□□ -1.63
SGIP1-211ENST00000484988 SYTL5Q8TDW5 730 aaPredicted RBP4.89□□□□□ -1.63
SGIP1-211ENST00000484988 HDAC8Q9BY41 377 aa4.89□□□□□ -1.63
SGIP1-211ENST00000484988 FAM53CQ9NYF3 392 aa4.89□□□□□ -1.63
SGIP1-211ENST00000484988 ZNRF3Q9ULT6 936 aa4.89□□□□□ -1.63
SGIP1-211ENST00000484988 FARP2O94887 1054 aaPredicted RBP4.88□□□□□ -1.63
SGIP1-211ENST00000484988 LTKP29376 864 aa4.88□□□□□ -1.63
SGIP1-211ENST00000484988 HK2P52789 917 aa4.88□□□□□ -1.63
SGIP1-211ENST00000484988 CHMP4BP1P59074 171 aa4.88□□□□□ -1.63
SGIP1-211ENST00000484988 TEKQ02763 1124 aa4.88□□□□□ -1.63
SGIP1-211ENST00000484988 ZNF648Q5T619 568 aaPredicted RBP4.88□□□□□ -1.63
SGIP1-211ENST00000484988 USHBP1Q8N6Y0 703 aa4.88□□□□□ -1.63
SGIP1-211ENST00000484988 DAGLBQ8NCG7 672 aa4.88□□□□□ -1.63
SGIP1-211ENST00000484988 RGS22Q8NE09 1264 aa4.88□□□□□ -1.63
SGIP1-211ENST00000484988 MRRFQ96E11 262 aaKnown RBP4.88□□□□□ -1.63
SGIP1-211ENST00000484988 LIN37Q96GY3 246 aaPredicted RBP4.88□□□□□ -1.63
SGIP1-211ENST00000484988 SLC9A7Q96T83 725 aa4.88□□□□□ -1.63
SGIP1-211ENST00000484988 KIAA1522Q9P206 1035 aaPredicted RBP4.88□□□□□ -1.63
SGIP1-211ENST00000484988 LRRC10BA6NIK2 292 aa4.87□□□□□ -1.63
SGIP1-211ENST00000484988 UNCXA6NJT0 531 aa4.87□□□□□ -1.63
SGIP1-211ENST00000484988 CLEC3AO75596 197 aa4.87□□□□□ -1.63
SGIP1-211ENST00000484988 ACRP10323 421 aa4.87□□□□□ -1.63
SGIP1-211ENST00000484988 IMPDH2P12268 514 aa4.87□□□□□ -1.63
SGIP1-211ENST00000484988 RAC2P15153 192 aa4.87□□□□□ -1.63
SGIP1-211ENST00000484988 SNW1Q13573 536 aaKnown RBP4.87□□□□□ -1.63
SGIP1-211ENST00000484988 CLEC16AQ2KHT3 1053 aa4.87□□□□□ -1.63
SGIP1-211ENST00000484988 TMC3Q7Z5M5 1100 aa4.87□□□□□ -1.63
SGIP1-211ENST00000484988 ZNF654Q8IZM8 581 aa4.87□□□□□ -1.63
SGIP1-211ENST00000484988 TAB3Q8N5C8 712 aaPredicted RBP4.87□□□□□ -1.63
SGIP1-211ENST00000484988 ZNF655Q8N720 491 aaPredicted RBP4.87□□□□□ -1.63
SGIP1-211ENST00000484988 RBBP8NLQ8NC74 664 aaPredicted RBP4.87□□□□□ -1.63
SGIP1-211ENST00000484988 PDZD8Q8NEN9 1154 aa4.87□□□□□ -1.63
SGIP1-211ENST00000484988 ABHD4Q8TB40 342 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms