RNA–Protein interactions for RNA: ENST00000483956.1

SEC61A1-205, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 1 (best)

Gene SEC61A1, Length 3,046 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-205ENST00000483956 PPFIA1Q13136 1202 aa13.02□□□□□ -0.33
SEC61A1-205ENST00000483956 NAA25Q14CX7 972 aa13.02□□□□□ -0.33
SEC61A1-205ENST00000483956 NTRK3Q16288 839 aa13.02□□□□□ -0.33
SEC61A1-205ENST00000483956 CCDC57Q2TAC2 916 aa13.02□□□□□ -0.33
SEC61A1-205ENST00000483956 ZC3H12AQ5D1E8 599 aaKnown RBP13.02□□□□□ -0.33
SEC61A1-205ENST00000483956 SPECC1LQ69YQ0 1117 aa13.02□□□□□ -0.33
SEC61A1-205ENST00000483956 NBPF5PQ86XG9 351 aaPredicted RBP13.02□□□□□ -0.33
SEC61A1-205ENST00000483956 TMEM87BQ96K49 555 aa13.02□□□□□ -0.33
SEC61A1-205ENST00000483956 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.02□□□□□ -0.33
SEC61A1-205ENST00000483956 LRP6O75581 1613 aa13.02□□□□□ -0.33
SEC61A1-205ENST00000483956 MEFVO15553 781 aaPredicted RBP13.02□□□□□ -0.33
SEC61A1-205ENST00000483956 KIF5CO60282 957 aa13.02□□□□□ -0.33
SEC61A1-205ENST00000483956 MYBL2P10244 700 aa13.02□□□□□ -0.33
SEC61A1-205ENST00000483956 PDE4BQ07343 736 aa13.02□□□□□ -0.33
SEC61A1-205ENST00000483956 WDR93Q6P2C0 686 aa13.02□□□□□ -0.33
SEC61A1-205ENST00000483956 SGMS1Q86VZ5 419 aa13.02□□□□□ -0.33
SEC61A1-205ENST00000483956 TBC1D10CQ8IV04 446 aa13.02□□□□□ -0.33
SEC61A1-205ENST00000483956 KRI1Q8N9T8 703 aaKnown RBP13.02□□□□□ -0.33
SEC61A1-205ENST00000483956 DACH1Q9UI36 760 aa13.02□□□□□ -0.33
SEC61A1-205ENST00000483956 SOWAHDA6NJG2 315 aa13.01□□□□□ -0.33
SEC61A1-205ENST00000483956 CCDC175P0C221 793 aa13.01□□□□□ -0.33
SEC61A1-205ENST00000483956 PDHBP11177 359 aa13.01□□□□□ -0.33
SEC61A1-205ENST00000483956 CDC27P30260 824 aa13.01□□□□□ -0.33
SEC61A1-205ENST00000483956 TRIM29Q14134 588 aa13.01□□□□□ -0.33
SEC61A1-205ENST00000483956 CYB5R4Q7L1T6 521 aa13.01□□□□□ -0.33
SEC61A1-205ENST00000483956 MLKLQ8NB16 471 aa13.01□□□□□ -0.33
SEC61A1-205ENST00000483956 ENOX1Q8TC92 643 aaKnown RBP13.01□□□□□ -0.33
SEC61A1-205ENST00000483956 THOC1Q96FV9 657 aaKnown RBP13.01□□□□□ -0.33
SEC61A1-205ENST00000483956 ISCA1Q9BUE6 129 aa13.01□□□□□ -0.33
SEC61A1-205ENST00000483956 SPATS2LQ9NUQ6 558 aaKnown RBP13.01□□□□□ -0.33
SEC61A1-205ENST00000483956 IRAK4Q9NWZ3 460 aa13.01□□□□□ -0.33
SEC61A1-205ENST00000483956 NID2Q14112 1375 aa13.01□□□□□ -0.33
SEC61A1-205ENST00000483956 RIC1Q4ADV7 1423 aa13.01□□□□□ -0.33
SEC61A1-205ENST00000483956 NDUFAB1O14561 156 aa13.01□□□□□ -0.33
SEC61A1-205ENST00000483956 CAND2O75155 1236 aa13.01□□□□□ -0.33
SEC61A1-205ENST00000483956 ADD2P35612 726 aa13.01□□□□□ -0.33
SEC61A1-205ENST00000483956 TRIML1Q8N9V2 468 aa13.01□□□□□ -0.33
SEC61A1-205ENST00000483956 CCDC26Q8TAB7 109 aa13.01□□□□□ -0.33
SEC61A1-205ENST00000483956 PARD3BQ8TEW8 1205 aa13.01□□□□□ -0.33
SEC61A1-205ENST00000483956 COG1Q8WTW3 980 aa13.01□□□□□ -0.33
SEC61A1-205ENST00000483956 ZNF512BQ96KM6 892 aaPredicted RBP13.01□□□□□ -0.33
SEC61A1-205ENST00000483956 SH3GL3Q99963 347 aa13.01□□□□□ -0.33
SEC61A1-205ENST00000483956 UBN2Q6ZU65 1347 aa13.01□□□□□ -0.33
SEC61A1-205ENST00000483956 CTAGE9A4FU28 777 aa13□□□□□ -0.33
SEC61A1-205ENST00000483956 PEX19P40855 299 aa13□□□□□ -0.33
SEC61A1-205ENST00000483956 TUBB4BP68371 445 aa13□□□□□ -0.33
SEC61A1-205ENST00000483956 CCDC40Q4G0X9 1142 aa13□□□□□ -0.33
SEC61A1-205ENST00000483956 GSPT2Q8IYD1 628 aaKnown RBP13□□□□□ -0.33
SEC61A1-205ENST00000483956 PLA2G12BQ9BX93 195 aa13□□□□□ -0.33
SEC61A1-205ENST00000483956 MAN1B1Q9UKM7 699 aa13□□□□□ -0.33
SEC61A1-205ENST00000483956 ZBTB43O43298 467 aa13□□□□□ -0.33
SEC61A1-205ENST00000483956 RASSF9O75901 435 aa13□□□□□ -0.33
SEC61A1-205ENST00000483956 TUBBP07437 444 aa13□□□□□ -0.33
SEC61A1-205ENST00000483956 IARSP41252 1262 aaKnown RBP13□□□□□ -0.33
SEC61A1-205ENST00000483956 SARSP49591 514 aaKnown RBP13□□□□□ -0.33
SEC61A1-205ENST00000483956 NCAPH2Q6IBW4 605 aa13□□□□□ -0.33
SEC61A1-205ENST00000483956 B4GALNT4Q76KP1 1039 aa13□□□□□ -0.33
SEC61A1-205ENST00000483956 SLC35F6Q8N357 371 aa13□□□□□ -0.33
SEC61A1-205ENST00000483956 PHKBQ93100 1093 aa13□□□□□ -0.33
SEC61A1-205ENST00000483956 CRACR2AQ9BSW2 395 aa13□□□□□ -0.33
SEC61A1-205ENST00000483956 ZBTB3Q9H5J0 574 aa13□□□□□ -0.33
SEC61A1-205ENST00000483956 ATXN2Q99700 1313 aaKnown RBP12.99□□□□□ -0.33
SEC61A1-205ENST00000483956 RANBP6O60518 1105 aaKnown RBP12.99□□□□□ -0.33
SEC61A1-205ENST00000483956 RPSAP08865 295 aaKnown RBP12.99□□□□□ -0.33
SEC61A1-205ENST00000483956 CSB-PGBD3P0DP91 1061 aa12.99□□□□□ -0.33
SEC61A1-205ENST00000483956 SMTNP53814 917 aa12.99□□□□□ -0.33
SEC61A1-205ENST00000483956 MORC3Q14149 939 aa12.99□□□□□ -0.33
SEC61A1-205ENST00000483956 POSTNQ15063 836 aa12.99□□□□□ -0.33
SEC61A1-205ENST00000483956 E2F5Q15329 346 aa12.99□□□□□ -0.33
SEC61A1-205ENST00000483956 NOSTRINQ8IVI9 506 aa12.99□□□□□ -0.33
SEC61A1-205ENST00000483956 IGDCC4Q8TDY8 1250 aa12.99□□□□□ -0.33
SEC61A1-205ENST00000483956 FAM217BQ9NTX9 383 aaPredicted RBP12.99□□□□□ -0.33
SEC61A1-205ENST00000483956 NFE2L3Q9Y4A8 694 aa12.99□□□□□ -0.33
SEC61A1-205ENST00000483956 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.99□□□□□ -0.33
SEC61A1-205ENST00000483956 ZMYND10O75800 440 aa12.99□□□□□ -0.33
SEC61A1-205ENST00000483956 TRIM28Q13263 835 aaKnown RBP12.99□□□□□ -0.33
SEC61A1-205ENST00000483956 TLDC1Q6P9B6 456 aa12.99□□□□□ -0.33
SEC61A1-205ENST00000483956 NUTM2AQ8IVF1 878 aaPredicted RBP12.99□□□□□ -0.33
SEC61A1-205ENST00000483956 STK11IPQ8N1F8 1099 aa12.99□□□□□ -0.33
SEC61A1-205ENST00000483956 MICAL1Q8TDZ2 1067 aa12.99□□□□□ -0.33
SEC61A1-205ENST00000483956 CDC5LQ99459 802 aaKnown RBP12.99□□□□□ -0.33
SEC61A1-205ENST00000483956 LY9Q9HBG7 655 aa12.99□□□□□ -0.33
SEC61A1-205ENST00000483956 SLC40A1Q9NP59 571 aa12.99□□□□□ -0.33
SEC61A1-205ENST00000483956 TIAM2Q8IVF5 1701 aa12.99□□□□□ -0.33
SEC61A1-205ENST00000483956 CHD4Q14839 1912 aa12.99□□□□□ -0.33
SEC61A1-205ENST00000483956 SSBP05455 408 aaKnown RBP eCLIP12.99□□□□□ -0.33
SEC61A1-205ENST00000483956 LIFRP42702 1097 aa12.99□□□□□ -0.33
SEC61A1-205ENST00000483956 TTF1Q15361 905 aaPredicted RBP12.99□□□□□ -0.33
SEC61A1-205ENST00000483956 UBE3CQ15386 1083 aa12.99□□□□□ -0.33
SEC61A1-205ENST00000483956 RNF187Q5TA31 235 aaPredicted RBP12.99□□□□□ -0.33
SEC61A1-205ENST00000483956 FAM228AQ86W67 206 aa12.99□□□□□ -0.33
SEC61A1-205ENST00000483956 MICU3Q86XE3 530 aa12.99□□□□□ -0.33
SEC61A1-205ENST00000483956 ZNF579Q8NAF0 562 aaKnown RBP12.99□□□□□ -0.33
SEC61A1-205ENST00000483956 WASF1Q92558 559 aa12.99□□□□□ -0.33
SEC61A1-205ENST00000483956 PANX2Q96RD6 677 aa12.99□□□□□ -0.33
SEC61A1-205ENST00000483956 VCPKMTQ9H867 229 aa12.99□□□□□ -0.33
SEC61A1-205ENST00000483956 CPSF2Q9P2I0 782 aaKnown RBP12.99□□□□□ -0.33
SEC61A1-205ENST00000483956 DENND2AQ9ULE3 1009 aa12.99□□□□□ -0.33
SEC61A1-205ENST00000483956 ADGRG1Q9Y653 693 aa12.99□□□□□ -0.33
SEC61A1-205ENST00000483956 TNS2Q63HR2 1409 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms