RNA–Protein interactions for RNA: ENST00000482902.5

SSR4-209, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 2,409 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-209ENST00000482902 MAGEA9P43362 315 aa20.47■□□□□ 0.87
SSR4-209ENST00000482902 ADKP55263 362 aaKnown RBP20.47■□□□□ 0.87
SSR4-209ENST00000482902 GOLGA6L1Q8N7Z2 621 aa20.47■□□□□ 0.87
SSR4-209ENST00000482902 MSANTD4Q8NCY6 345 aa20.47■□□□□ 0.87
SSR4-209ENST00000482902 IRX2Q9BZI1 471 aaPredicted RBP20.47■□□□□ 0.87
SSR4-209ENST00000482902 TRIM75PA6NK02 468 aa20.46■□□□□ 0.87
SSR4-209ENST00000482902 GYG1P46976 350 aa20.46■□□□□ 0.87
SSR4-209ENST00000482902 PPP2R5BQ15173 497 aa20.46■□□□□ 0.87
SSR4-209ENST00000482902 SPECC1LQ69YQ0 1117 aa20.46■□□□□ 0.87
SSR4-209ENST00000482902 ENAHQ8N8S7 591 aaPredicted RBP20.46■□□□□ 0.87
SSR4-209ENST00000482902 MED15Q96RN5 788 aa20.46■□□□□ 0.87
SSR4-209ENST00000482902 L1RE1Q9UN81 338 aa20.46■□□□□ 0.87
SSR4-209ENST00000482902 FAN1Q9Y2M0 1017 aa20.46■□□□□ 0.87
SSR4-209ENST00000482902 PKN1Q16512 942 aa20.46■□□□□ 0.87
SSR4-209ENST00000482902 PACS2Q86VP3 889 aa20.46■□□□□ 0.87
SSR4-209ENST00000482902 NUTM2AQ8IVF1 878 aaPredicted RBP20.46■□□□□ 0.87
SSR4-209ENST00000482902 ZSCAN10Q96SZ4 725 aaPredicted RBP20.46■□□□□ 0.87
SSR4-209ENST00000482902 SAMSN1Q9NSI8 373 aaKnown RBP20.46■□□□□ 0.87
SSR4-209ENST00000482902 hCG_1642624A0A1W2PR95 340 aa20.45■□□□□ 0.86
SSR4-209ENST00000482902 PLCD1P51178 756 aa20.45■□□□□ 0.86
SSR4-209ENST00000482902 GTF2A1P52655 376 aaPredicted RBP20.45■□□□□ 0.86
SSR4-209ENST00000482902 NOM1Q5C9Z4 860 aaKnown RBP20.45■□□□□ 0.86
SSR4-209ENST00000482902 SPATA20Q8TB22 786 aa20.45■□□□□ 0.86
SSR4-209ENST00000482902 ACSBG1Q96GR2 724 aa20.45■□□□□ 0.86
SSR4-209ENST00000482902 PRDM1O75626 825 aa20.45■□□□□ 0.86
SSR4-209ENST00000482902 KRT2P35908 639 aa20.45■□□□□ 0.86
SSR4-209ENST00000482902 EARS2Q5JPH6 523 aaKnown RBP20.45■□□□□ 0.86
SSR4-209ENST00000482902 CDC5LQ99459 802 aaKnown RBP20.45■□□□□ 0.86
SSR4-209ENST00000482902 RIOK1Q9BRS2 568 aaKnown RBP20.45■□□□□ 0.86
SSR4-209ENST00000482902 GNL3LQ9NVN8 582 aaKnown RBP20.45■□□□□ 0.86
SSR4-209ENST00000482902 AATFQ9NY61 560 aaKnown RBP eCLIP20.45■□□□□ 0.86
SSR4-209ENST00000482902 BCL9LQ86UU0 1499 aa20.45■□□□□ 0.86
SSR4-209ENST00000482902 ZNF804BA4D1E1 1349 aa20.44■□□□□ 0.86
SSR4-209ENST00000482902 CYP2D7A0A087X1C5 515 aa20.44■□□□□ 0.86
SSR4-209ENST00000482902 LOC102724428A0A0B4J2F2 783 aa20.44■□□□□ 0.86
SSR4-209ENST00000482902 SIK1P57059 783 aa20.44■□□□□ 0.86
SSR4-209ENST00000482902 MTF1Q14872 753 aa20.44■□□□□ 0.86
SSR4-209ENST00000482902 IFIT1BQ5T764 474 aaKnown RBP20.44■□□□□ 0.86
SSR4-209ENST00000482902 CATIPQ7Z7H3 387 aa20.44■□□□□ 0.86
SSR4-209ENST00000482902 PHF20Q9BVI0 1012 aa20.44■□□□□ 0.86
SSR4-209ENST00000482902 SUGCTQ9HAC7 445 aa20.44■□□□□ 0.86
SSR4-209ENST00000482902 PUF60Q9UHX1 559 aaKnown RBP20.44■□□□□ 0.86
SSR4-209ENST00000482902 EIF3CLB5ME19 914 aaKnown RBP20.44■□□□□ 0.86
SSR4-209ENST00000482902 POTEB2H3BUK9 544 aa20.44■□□□□ 0.86
SSR4-209ENST00000482902 EIF3JO75822 258 aaKnown RBP20.44■□□□□ 0.86
SSR4-209ENST00000482902 DYNLL1P63167 89 aaKnown RBP20.44■□□□□ 0.86
SSR4-209ENST00000482902 FUT2Q10981 343 aa20.44■□□□□ 0.86
SSR4-209ENST00000482902 ITPK1Q13572 414 aa20.44■□□□□ 0.86
SSR4-209ENST00000482902 TTC31Q49AM3 519 aaPredicted RBP20.44■□□□□ 0.86
SSR4-209ENST00000482902 EPSTI1Q96J88 318 aa20.44■□□□□ 0.86
SSR4-209ENST00000482902 EIF3CQ99613 913 aaKnown RBP20.44■□□□□ 0.86
SSR4-209ENST00000482902 ABCB6Q9NP58 842 aa20.44■□□□□ 0.86
SSR4-209ENST00000482902 V9GY48 417 aaPredicted RBP20.44■□□□□ 0.86
SSR4-209ENST00000482902 COL14A1Q05707 1796 aaKnown RBP20.44■□□□□ 0.86
SSR4-209ENST00000482902 STRCQ7RTU9 1775 aa20.44■□□□□ 0.86
SSR4-209ENST00000482902 PLCH1Q4KWH8 1693 aa20.44■□□□□ 0.86
SSR4-209ENST00000482902 A0A087X0B3 334 aa20.43■□□□□ 0.86
SSR4-209ENST00000482902 WTIPA6NIX2 430 aaPredicted RBP20.43■□□□□ 0.86
SSR4-209ENST00000482902 PRPF3O43395 683 aaKnown RBP20.43■□□□□ 0.86
SSR4-209ENST00000482902 PLEKHA8P1O95397 391 aa20.43■□□□□ 0.86
SSR4-209ENST00000482902 ERCC5P28715 1186 aaPredicted RBP20.43■□□□□ 0.86
SSR4-209ENST00000482902 CDC23Q9UJX2 597 aa20.43■□□□□ 0.86
SSR4-209ENST00000482902 AFMP43652 599 aa20.43■□□□□ 0.86
SSR4-209ENST00000482902 DOT1LQ8TEK3 1739 aa20.43■□□□□ 0.86
SSR4-209ENST00000482902 CEP112Q8N8E3 955 aa20.42■□□□□ 0.86
SSR4-209ENST00000482902 GEMIN8Q9NWZ8 242 aaKnown RBP20.42■□□□□ 0.86
SSR4-209ENST00000482902 ERLIN1O75477 346 aa20.42■□□□□ 0.86
SSR4-209ENST00000482902 CCDC175P0C221 793 aa20.42■□□□□ 0.86
SSR4-209ENST00000482902 NR1I3Q14994 352 aa20.42■□□□□ 0.86
SSR4-209ENST00000482902 WWC2Q6AWC2 1192 aa20.42■□□□□ 0.86
SSR4-209ENST00000482902 ANKRD18AQ8IVF6 992 aa20.42■□□□□ 0.86
SSR4-209ENST00000482902 SYMPKQ92797 1274 aaKnown RBP20.42■□□□□ 0.86
SSR4-209ENST00000482902 RBM28Q9NW13 759 aaKnown RBP20.42■□□□□ 0.86
SSR4-209ENST00000482902 MKRN1Q9UHC7 482 aaKnown RBP20.42■□□□□ 0.86
SSR4-209ENST00000482902 COL1A1P02452 1464 aaPredicted RBP20.42■□□□□ 0.86
SSR4-209ENST00000482902 LRRC31Q6UY01 552 aa20.41■□□□□ 0.86
SSR4-209ENST00000482902 IQCA1Q86XH1 822 aa20.41■□□□□ 0.86
SSR4-209ENST00000482902 BRIP1Q9BX63 1249 aa20.41■□□□□ 0.86
SSR4-209ENST00000482902 JRKLQ9Y4A0 524 aa20.41■□□□□ 0.86
SSR4-209ENST00000482902 COL4A1P02462 1669 aa20.41■□□□□ 0.86
SSR4-209ENST00000482902 WNT7AO00755 349 aa20.41■□□□□ 0.86
SSR4-209ENST00000482902 CORO7P57737 925 aa20.41■□□□□ 0.86
SSR4-209ENST00000482902 KLHL10Q6JEL2 608 aa20.41■□□□□ 0.86
SSR4-209ENST00000482902 PAGE5Q96GU1 130 aa20.41■□□□□ 0.86
SSR4-209ENST00000482902 BRMS1Q9HCU9 246 aa20.41■□□□□ 0.86
SSR4-209ENST00000482902 LZTFL1Q9NQ48 299 aa20.41■□□□□ 0.86
SSR4-209ENST00000482902 A0A0U1RQJ8 604 aa20.4■□□□□ 0.86
SSR4-209ENST00000482902 A0A1B0GTH6 734 aa20.4■□□□□ 0.86
SSR4-209ENST00000482902 SOWAHDA6NJG2 315 aa20.4■□□□□ 0.86
SSR4-209ENST00000482902 CASP1P29466 404 aa20.4■□□□□ 0.86
SSR4-209ENST00000482902 TROAPQ12815 778 aa20.4■□□□□ 0.86
SSR4-209ENST00000482902 UBE4AQ14139 1066 aa20.4■□□□□ 0.86
SSR4-209ENST00000482902 DDB1Q16531 1140 aa20.4■□□□□ 0.86
SSR4-209ENST00000482902 CAVIN4Q5BKX8 364 aa20.4■□□□□ 0.86
SSR4-209ENST00000482902 ATRIPQ8WXE1 791 aa20.4■□□□□ 0.86
SSR4-209ENST00000482902 FERMT2Q96AC1 680 aa20.4■□□□□ 0.86
SSR4-209ENST00000482902 ADGRG1Q9Y653 693 aa20.4■□□□□ 0.86
SSR4-209ENST00000482902 CICQ96RK0 1608 aaPredicted RBP20.4■□□□□ 0.86
SSR4-209ENST00000482902 BMP15O95972 392 aa20.39■□□□□ 0.86
SSR4-209ENST00000482902 GUCY2CP25092 1073 aa20.39■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms