RNA–Protein interactions for RNA: ENST00000482687.5

APTX-225, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-225ENST00000482687 MYH15Q9Y2K3 1946 aa12□□□□□ -0.49
APTX-225ENST00000482687 hCG_1642624A0A1W2PR95 340 aa12□□□□□ -0.49
APTX-225ENST00000482687 AKR1B1P15121 316 aa12□□□□□ -0.49
APTX-225ENST00000482687 IRX3P78415 501 aaPredicted RBP12□□□□□ -0.49
APTX-225ENST00000482687 DNM1Q05193 864 aaKnown RBP12□□□□□ -0.49
APTX-225ENST00000482687 CLEC10AQ8IUN9 316 aa12□□□□□ -0.49
APTX-225ENST00000482687 OGFOD1Q8N543 542 aa12□□□□□ -0.49
APTX-225ENST00000482687 VEZTQ9HBM0 779 aa12□□□□□ -0.49
APTX-225ENST00000482687 SPDYE2BA6NHP3 402 aa12□□□□□ -0.49
APTX-225ENST00000482687 PLEKHA8P1O95397 391 aa12□□□□□ -0.49
APTX-225ENST00000482687 HLA-DOAP06340 250 aa12□□□□□ -0.49
APTX-225ENST00000482687 SPDYE6P0CI01 402 aa12□□□□□ -0.49
APTX-225ENST00000482687 GUCY1A2P33402 732 aa12□□□□□ -0.49
APTX-225ENST00000482687 GABPAQ06546 454 aa12□□□□□ -0.49
APTX-225ENST00000482687 SSRP1Q08945 709 aaKnown RBP12□□□□□ -0.49
APTX-225ENST00000482687 SHROOM1Q2M3G4 852 aaPredicted RBP12□□□□□ -0.49
APTX-225ENST00000482687 CPLX2Q6PUV4 134 aaKnown RBP12□□□□□ -0.49
APTX-225ENST00000482687 CRACR2BQ8N4Y2 399 aaPredicted RBP12□□□□□ -0.49
APTX-225ENST00000482687 IDI2Q9BXS1 227 aa12□□□□□ -0.49
APTX-225ENST00000482687 KAT14Q9H8E8 782 aa12□□□□□ -0.49
APTX-225ENST00000482687 ZNF287Q9HBT7 754 aa12□□□□□ -0.49
APTX-225ENST00000482687 ZNF70Q9UC06 446 aaPredicted RBP12□□□□□ -0.49
APTX-225ENST00000482687 SERPINB13Q9UIV8 391 aa12□□□□□ -0.49
APTX-225ENST00000482687 STX8Q9UNK0 236 aa12□□□□□ -0.49
APTX-225ENST00000482687 MPHOSPH10O00566 681 aaKnown RBP11.99□□□□□ -0.49
APTX-225ENST00000482687 CDKL5O76039 1030 aa11.99□□□□□ -0.49
APTX-225ENST00000482687 ADCY5O95622 1261 aa11.99□□□□□ -0.49
APTX-225ENST00000482687 EGFRP00533 1210 aa11.99□□□□□ -0.49
APTX-225ENST00000482687 SHMT1P34896 483 aa11.99□□□□□ -0.49
APTX-225ENST00000482687 EIF6P56537 245 aaKnown RBP11.99□□□□□ -0.49
APTX-225ENST00000482687 TROAPQ12815 778 aa11.99□□□□□ -0.49
APTX-225ENST00000482687 RESTQ13127 1097 aa11.99□□□□□ -0.49
APTX-225ENST00000482687 TNIP1Q15025 636 aa11.99□□□□□ -0.49
APTX-225ENST00000482687 NBPF9Q3BBW0 867 aa11.99□□□□□ -0.49
APTX-225ENST00000482687 RASGRP2Q7LDG7 609 aa11.99□□□□□ -0.49
APTX-225ENST00000482687 KRT222Q8N1A0 295 aa11.99□□□□□ -0.49
APTX-225ENST00000482687 AGBL3Q8NEM8 1001 aa11.99□□□□□ -0.49
APTX-225ENST00000482687 NEDD1Q8NHV4 660 aa11.99□□□□□ -0.49
APTX-225ENST00000482687 C8orf76Q96K31 380 aa11.99□□□□□ -0.49
APTX-225ENST00000482687 TMEM47Q9BQJ4 181 aa11.99□□□□□ -0.49
APTX-225ENST00000482687 ALG1Q9BT22 464 aa11.99□□□□□ -0.49
APTX-225ENST00000482687 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.99□□□□□ -0.49
APTX-225ENST00000482687 TTC12Q9H892 705 aaPredicted RBP11.99□□□□□ -0.49
APTX-225ENST00000482687 FAM53CQ9NYF3 392 aa11.99□□□□□ -0.49
APTX-225ENST00000482687 ZNF541Q9H0D2 1346 aa11.99□□□□□ -0.49
APTX-225ENST00000482687 SMTNL1A8MU46 457 aa11.98□□□□□ -0.49
APTX-225ENST00000482687 FIBPO43427 364 aa11.98□□□□□ -0.49
APTX-225ENST00000482687 GMPSP49915 693 aaPredicted RBP11.98□□□□□ -0.49
APTX-225ENST00000482687 NBPF11Q86T75 865 aa11.98□□□□□ -0.49
APTX-225ENST00000482687 USP48Q86UV5 1035 aa11.98□□□□□ -0.49
APTX-225ENST00000482687 PLCD3Q8N3E9 789 aa11.98□□□□□ -0.49
APTX-225ENST00000482687 CEP95Q96GE4 821 aa11.98□□□□□ -0.49
APTX-225ENST00000482687 DNAJC18Q9H819 358 aa11.98□□□□□ -0.49
APTX-225ENST00000482687 TFIP11Q9UBB9 837 aaKnown RBP11.98□□□□□ -0.49
APTX-225ENST00000482687 USP25Q9UHP3 1055 aa11.98□□□□□ -0.49
APTX-225ENST00000482687 LTBP3Q9NS15 1303 aa11.98□□□□□ -0.49
APTX-225ENST00000482687 NID2Q14112 1375 aa11.98□□□□□ -0.49
APTX-225ENST00000482687 SBF1O95248 1867 aa11.98□□□□□ -0.49
APTX-225ENST00000482687 GADD45BO75293 160 aaPredicted RBP11.97□□□□□ -0.49
APTX-225ENST00000482687 FMNL1O95466 1100 aaPredicted RBP11.97□□□□□ -0.49
APTX-225ENST00000482687 IFNAR1P17181 557 aa11.97□□□□□ -0.49
APTX-225ENST00000482687 PAXIP1Q6ZW49 1069 aaPredicted RBP11.97□□□□□ -0.49
APTX-225ENST00000482687 DGKHQ86XP1 1220 aa11.97□□□□□ -0.49
APTX-225ENST00000482687 POTEDQ86YR6 584 aa11.97□□□□□ -0.49
APTX-225ENST00000482687 CDAN1Q8IWY9 1227 aa11.97□□□□□ -0.49
APTX-225ENST00000482687 PNMA1Q8ND90 353 aa11.97□□□□□ -0.49
APTX-225ENST00000482687 SYT17Q9BSW7 474 aa11.97□□□□□ -0.49
APTX-225ENST00000482687 YY1AP1Q9H869 796 aa11.97□□□□□ -0.49
APTX-225ENST00000482687 MYOZ2Q9NPC6 264 aa11.97□□□□□ -0.49
APTX-225ENST00000482687 TCP11L1Q9NUJ3 509 aa11.97□□□□□ -0.49
APTX-225ENST00000482687 TMOD2Q9NZR1 351 aa11.97□□□□□ -0.49
APTX-225ENST00000482687 MYH4Q9Y623 1939 aa11.97□□□□□ -0.49
APTX-225ENST00000482687 BAZ2BQ9UIF8 2168 aaKnown RBP11.97□□□□□ -0.49
APTX-225ENST00000482687 GOLGA6L6A8MZA4 724 aa11.97□□□□□ -0.49
APTX-225ENST00000482687 DDAH1O94760 285 aa11.97□□□□□ -0.49
APTX-225ENST00000482687 ATP2B2Q01814 1243 aa11.97□□□□□ -0.49
APTX-225ENST00000482687 SAMD7Q7Z3H4 446 aa11.97□□□□□ -0.49
APTX-225ENST00000482687 SRBD1Q8N5C6 995 aaKnown RBP11.97□□□□□ -0.49
APTX-225ENST00000482687 TMEM87AQ8NBN3 555 aa11.97□□□□□ -0.49
APTX-225ENST00000482687 KIF18AQ8NI77 898 aa11.97□□□□□ -0.49
APTX-225ENST00000482687 TRIM34Q9BYJ4 488 aa11.97□□□□□ -0.49
APTX-225ENST00000482687 PI4KBQ9UBF8 816 aa11.97□□□□□ -0.49
APTX-225ENST00000482687 DICER1Q9UPY3 1922 aaKnown RBP11.97□□□□□ -0.49
APTX-225ENST00000482687 CNTNAP1P78357 1384 aa11.96□□□□□ -0.49
APTX-225ENST00000482687 ASTN2O75129 1339 aaPredicted RBP11.96□□□□□ -0.49
APTX-225ENST00000482687 CCDC196A0A1B0GTZ2 297 aa11.96□□□□□ -0.49
APTX-225ENST00000482687 FZD9O00144 591 aa11.96□□□□□ -0.49
APTX-225ENST00000482687 GDF11O95390 407 aa11.96□□□□□ -0.49
APTX-225ENST00000482687 GOLGA8HP0CJ92 632 aa11.96□□□□□ -0.49
APTX-225ENST00000482687 CALM1P0DP23 149 aa11.96□□□□□ -0.49
APTX-225ENST00000482687 CALM2P0DP24 149 aa11.96□□□□□ -0.49
APTX-225ENST00000482687 CALM3P0DP25 149 aa11.96□□□□□ -0.49
APTX-225ENST00000482687 SPDYE2Q495Y8 402 aa11.96□□□□□ -0.49
APTX-225ENST00000482687 TBC1D10BQ4KMP7 808 aaPredicted RBP11.96□□□□□ -0.49
APTX-225ENST00000482687 MICALL2Q8IY33 904 aa11.96□□□□□ -0.49
APTX-225ENST00000482687 LRRC47Q8N1G4 583 aaKnown RBP11.96□□□□□ -0.49
APTX-225ENST00000482687 STAG2Q8N3U4 1231 aa11.96□□□□□ -0.49
APTX-225ENST00000482687 CTCFLQ8NI51 663 aaPredicted RBP11.96□□□□□ -0.49
APTX-225ENST00000482687 ANKS1AQ92625 1134 aa11.96□□□□□ -0.49
APTX-225ENST00000482687 DHX36Q9H2U1 1008 aaKnown RBP11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms