RNA–Protein interactions for RNA: ENST00000482655.2

GTF3A-207, Transcript of general transcription factor IIIA, humanhuman

TSL 2

Gene GTF3A, Length 829 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-207ENST00000482655 OVOS1Q6IE37 1185 aa6.23□□□□□ -1.41
GTF3A-207ENST00000482655 USP48Q86UV5 1035 aa6.23□□□□□ -1.41
GTF3A-207ENST00000482655 TSPYL5Q86VY4 417 aaPredicted RBP6.23□□□□□ -1.41
GTF3A-207ENST00000482655 REXO1Q8N1G1 1221 aaKnown RBP6.23□□□□□ -1.41
GTF3A-207ENST00000482655 POU5F2Q8N7G0 328 aa6.23□□□□□ -1.41
GTF3A-207ENST00000482655 NKD1Q969G9 470 aa6.23□□□□□ -1.41
GTF3A-207ENST00000482655 NT5C1AQ9BXI3 368 aa6.23□□□□□ -1.41
GTF3A-207ENST00000482655 EHMT1Q9H9B1 1298 aa6.23□□□□□ -1.41
GTF3A-207ENST00000482655 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.23□□□□□ -1.41
GTF3A-207ENST00000482655 ESR1P03372 595 aa6.22□□□□□ -1.41
GTF3A-207ENST00000482655 EGR3Q06889 387 aa6.22□□□□□ -1.41
GTF3A-207ENST00000482655 LRRFIP1Q32MZ4 808 aaKnown RBP6.22□□□□□ -1.41
GTF3A-207ENST00000482655 TTC6Q86TZ1 520 aa6.22□□□□□ -1.41
GTF3A-207ENST00000482655 KRTAP4-12Q9BQ66 201 aa6.22□□□□□ -1.41
GTF3A-207ENST00000482655 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.22□□□□□ -1.41
GTF3A-207ENST00000482655 FAM53CQ9NYF3 392 aa6.22□□□□□ -1.41
GTF3A-207ENST00000482655 TMEM59LQ9UK28 342 aa6.22□□□□□ -1.41
GTF3A-207ENST00000482655 LRRC10BA6NIK2 292 aa6.21□□□□□ -1.42
GTF3A-207ENST00000482655 WASH4PA8MWX3 477 aa6.21□□□□□ -1.42
GTF3A-207ENST00000482655 RBAK-RBAKDNI3L0D1 243 aa6.21□□□□□ -1.42
GTF3A-207ENST00000482655 SRFP11831 508 aa6.21□□□□□ -1.42
GTF3A-207ENST00000482655 HK2P52789 917 aa6.21□□□□□ -1.42
GTF3A-207ENST00000482655 FANCCQ00597 558 aa6.21□□□□□ -1.42
GTF3A-207ENST00000482655 CLCQ05315 142 aa6.21□□□□□ -1.42
GTF3A-207ENST00000482655 RAD51AP2Q09MP3 1159 aa6.21□□□□□ -1.42
GTF3A-207ENST00000482655 GAB4Q2WGN9 574 aa6.21□□□□□ -1.42
GTF3A-207ENST00000482655 TMEM67Q5HYA8 995 aa6.21□□□□□ -1.42
GTF3A-207ENST00000482655 MPZL3Q6UWV2 235 aa6.21□□□□□ -1.42
GTF3A-207ENST00000482655 NLRC3Q7RTR2 1065 aa6.21□□□□□ -1.42
GTF3A-207ENST00000482655 RNF34Q969K3 372 aa6.21□□□□□ -1.42
GTF3A-207ENST00000482655 C19orf73Q9NVV2 129 aa6.21□□□□□ -1.42
GTF3A-207ENST00000482655 DNAJC25-GNG10A0A024R161 153 aa6.2□□□□□ -1.42
GTF3A-207ENST00000482655 FARP2O94887 1054 aaPredicted RBP6.2□□□□□ -1.42
GTF3A-207ENST00000482655 UBOX5O94941 541 aa6.2□□□□□ -1.42
GTF3A-207ENST00000482655 GLI1P08151 1106 aa6.2□□□□□ -1.42
GTF3A-207ENST00000482655 POLR2BP30876 1174 aaKnown RBP6.2□□□□□ -1.42
GTF3A-207ENST00000482655 PKN1Q16512 942 aa6.2□□□□□ -1.42
GTF3A-207ENST00000482655 RALGPS1Q5JS13 557 aa6.2□□□□□ -1.42
GTF3A-207ENST00000482655 LDLRAD1Q5T700 205 aa6.2□□□□□ -1.42
GTF3A-207ENST00000482655 FYB2Q5VWT5 728 aa6.2□□□□□ -1.42
GTF3A-207ENST00000482655 CDCP2Q5VXM1 449 aa6.2□□□□□ -1.42
GTF3A-207ENST00000482655 SLITRK4Q8IW52 837 aa6.2□□□□□ -1.42
GTF3A-207ENST00000482655 ATG4CQ96DT6 458 aa6.2□□□□□ -1.42
GTF3A-207ENST00000482655 CNNM2Q9H8M5 875 aa6.2□□□□□ -1.42
GTF3A-207ENST00000482655 SCAMP3O14828 347 aaKnown RBP6.19□□□□□ -1.42
GTF3A-207ENST00000482655 CLEC3AO75596 197 aa6.19□□□□□ -1.42
GTF3A-207ENST00000482655 CCNFP41002 786 aa6.19□□□□□ -1.42
GTF3A-207ENST00000482655 NMIQ13287 307 aaPredicted RBP6.19□□□□□ -1.42
GTF3A-207ENST00000482655 ZNF394Q53GI3 561 aa6.19□□□□□ -1.42
GTF3A-207ENST00000482655 ZNF648Q5T619 568 aaPredicted RBP6.19□□□□□ -1.42
GTF3A-207ENST00000482655 KSR1Q8IVT5 923 aa6.19□□□□□ -1.42
GTF3A-207ENST00000482655 ABHD4Q8TB40 342 aa6.19□□□□□ -1.42
GTF3A-207ENST00000482655 MYLIPQ8WY64 445 aa6.19□□□□□ -1.42
GTF3A-207ENST00000482655 DHX38Q92620 1227 aaKnown RBP6.19□□□□□ -1.42
GTF3A-207ENST00000482655 EAF1Q96JC9 268 aaPredicted RBP6.19□□□□□ -1.42
GTF3A-207ENST00000482655 SLC38A3Q99624 504 aa6.19□□□□□ -1.42
GTF3A-207ENST00000482655 PCDHGB7Q9Y5F8 929 aa6.19□□□□□ -1.42
GTF3A-207ENST00000482655 PCDHA11Q9Y5I1 949 aa6.19□□□□□ -1.42
GTF3A-207ENST00000482655 SHISA3A0PJX4 238 aa6.18□□□□□ -1.42
GTF3A-207ENST00000482655 ZNF503-AS2A6NEH8 195 aa6.18□□□□□ -1.42
GTF3A-207ENST00000482655 C8AP07357 584 aa6.18□□□□□ -1.42
GTF3A-207ENST00000482655 IMPDH2P12268 514 aa6.18□□□□□ -1.42
GTF3A-207ENST00000482655 VAMP1P23763 118 aa6.18□□□□□ -1.42
GTF3A-207ENST00000482655 MLANAQ16655 118 aa6.18□□□□□ -1.42
GTF3A-207ENST00000482655 ENOX1Q8TC92 643 aaKnown RBP6.18□□□□□ -1.42
GTF3A-207ENST00000482655 LIN37Q96GY3 246 aaPredicted RBP6.18□□□□□ -1.42
GTF3A-207ENST00000482655 FERD3LQ96RJ6 166 aa6.18□□□□□ -1.42
GTF3A-207ENST00000482655 MKRN2Q9H000 416 aaKnown RBP6.18□□□□□ -1.42
GTF3A-207ENST00000482655 ADAMTS10Q9H324 1103 aa6.18□□□□□ -1.42
GTF3A-207ENST00000482655 MEIS3P2A8K0S8 358 aa6.17□□□□□ -1.42
GTF3A-207ENST00000482655 RECKO95980 971 aa6.17□□□□□ -1.42
GTF3A-207ENST00000482655 NME1P15531 152 aaKnown RBP6.17□□□□□ -1.42
GTF3A-207ENST00000482655 DUSP4Q13115 394 aa6.17□□□□□ -1.42
GTF3A-207ENST00000482655 LCE3BQ5TA77 95 aa6.17□□□□□ -1.42
GTF3A-207ENST00000482655 NBPF12Q5TAG4 269 aaPredicted RBP6.17□□□□□ -1.42
GTF3A-207ENST00000482655 NPM2Q86SE8 214 aaKnown RBP6.17□□□□□ -1.42
GTF3A-207ENST00000482655 KRTAP19-1Q8IUB9 90 aa6.17□□□□□ -1.42
GTF3A-207ENST00000482655 KRTAP1-3Q8IUG1 177 aa6.17□□□□□ -1.42
GTF3A-207ENST00000482655 OXR1Q8N573 874 aa6.17□□□□□ -1.42
GTF3A-207ENST00000482655 VWCEQ96DN2 955 aa6.17□□□□□ -1.42
GTF3A-207ENST00000482655 ANTXR1Q9H6X2 564 aa6.17□□□□□ -1.42
GTF3A-207ENST00000482655 SSU72P8A0A1W2PR75 194 aa6.16□□□□□ -1.42
GTF3A-207ENST00000482655 FBXW10Q5XX13 1052 aa6.16□□□□□ -1.42
GTF3A-207ENST00000482655 PDZD8Q8NEN9 1154 aa6.16□□□□□ -1.42
GTF3A-207ENST00000482655 SYTL5Q8TDW5 730 aaPredicted RBP6.16□□□□□ -1.42
GTF3A-207ENST00000482655 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.16□□□□□ -1.42
GTF3A-207ENST00000482655 ZNRF3Q9ULT6 936 aa6.16□□□□□ -1.42
GTF3A-207ENST00000482655 FITM1A5D6W6 292 aa6.15□□□□□ -1.42
GTF3A-207ENST00000482655 HPXP02790 462 aa6.15□□□□□ -1.42
GTF3A-207ENST00000482655 ZGLP1P0C6A0 271 aa6.15□□□□□ -1.42
GTF3A-207ENST00000482655 ERVFC1P60507 584 aa6.15□□□□□ -1.42
GTF3A-207ENST00000482655 NBPF9Q3BBW0 867 aa6.15□□□□□ -1.42
GTF3A-207ENST00000482655 RNF111Q6ZNA4 994 aa6.15□□□□□ -1.42
GTF3A-207ENST00000482655 ZNF654Q8IZM8 581 aa6.15□□□□□ -1.42
GTF3A-207ENST00000482655 ZNF655Q8N720 491 aaPredicted RBP6.15□□□□□ -1.42
GTF3A-207ENST00000482655 DAGLBQ8NCG7 672 aa6.15□□□□□ -1.42
GTF3A-207ENST00000482655 ZNF512BQ96KM6 892 aaPredicted RBP6.15□□□□□ -1.42
GTF3A-207ENST00000482655 FAM84AQ96KN4 292 aa6.15□□□□□ -1.42
GTF3A-207ENST00000482655 DHRS1Q96LJ7 313 aa6.15□□□□□ -1.42
GTF3A-207ENST00000482655 SLC6A18Q96N87 628 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms