RNA–Protein interactions for RNA: ENST00000482558.5

SNX13-208, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 1,139 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-208ENST00000482558 IFNL2Q8IZJ0 200 aa9.29□□□□□ -0.92
SNX13-208ENST00000482558 RHPN1Q8TCX5 695 aa9.29□□□□□ -0.92
SNX13-208ENST00000482558 QTRT2Q9H974 415 aaKnown RBP9.29□□□□□ -0.92
SNX13-208ENST00000482558 GOLGA2P5Q9HBQ8 144 aa9.29□□□□□ -0.92
SNX13-208ENST00000482558 LGR6Q9HBX8 967 aa9.29□□□□□ -0.92
SNX13-208ENST00000482558 BRD7Q9NPI1 651 aa9.29□□□□□ -0.92
SNX13-208ENST00000482558 HMGB1P1B2RPK0 211 aaPredicted RBP9.28□□□□□ -0.92
SNX13-208ENST00000482558 PEX14O75381 377 aa9.28□□□□□ -0.92
SNX13-208ENST00000482558 MAP4K4O95819 1239 aaPredicted RBP9.28□□□□□ -0.92
SNX13-208ENST00000482558 P4HBP07237 508 aaKnown RBP9.28□□□□□ -0.92
SNX13-208ENST00000482558 SDSP20132 328 aa9.28□□□□□ -0.92
SNX13-208ENST00000482558 MX1P20591 662 aa9.28□□□□□ -0.92
SNX13-208ENST00000482558 HSD3B2P26439 372 aa9.28□□□□□ -0.92
SNX13-208ENST00000482558 DNAJA1P31689 397 aaKnown RBP9.28□□□□□ -0.92
SNX13-208ENST00000482558 XPCQ01831 940 aaPredicted RBP9.28□□□□□ -0.92
SNX13-208ENST00000482558 BEND3Q5T5X7 828 aa9.28□□□□□ -0.92
SNX13-208ENST00000482558 ZNF746Q6NUN9 644 aaPredicted RBP9.28□□□□□ -0.92
SNX13-208ENST00000482558 MPRIPQ6WCQ1 1025 aa9.28□□□□□ -0.92
SNX13-208ENST00000482558 LRRC59Q96AG4 307 aaKnown RBP9.28□□□□□ -0.92
SNX13-208ENST00000482558 KIF1BPQ96EK5 621 aa9.28□□□□□ -0.92
SNX13-208ENST00000482558 GBP4Q96PP9 640 aa9.28□□□□□ -0.92
SNX13-208ENST00000482558 SSBP4Q9BWG4 385 aaPredicted RBP9.28□□□□□ -0.92
SNX13-208ENST00000482558 USP26Q9BXU7 913 aa9.28□□□□□ -0.92
SNX13-208ENST00000482558 EFCC1Q9HA90 598 aa9.28□□□□□ -0.92
SNX13-208ENST00000482558 DDX21Q9NR30 783 aaKnown RBP eCLIP9.28□□□□□ -0.92
SNX13-208ENST00000482558 KCNH4Q9UQ05 1017 aa9.28□□□□□ -0.92
SNX13-208ENST00000482558 LRRFIP2Q9Y608 721 aaKnown RBP9.28□□□□□ -0.92
SNX13-208ENST00000482558 SPATA31A3Q5VYP0 1347 aa9.28□□□□□ -0.92
SNX13-208ENST00000482558 SIPA1L3O60292 1781 aaPredicted RBP9.27□□□□□ -0.92
SNX13-208ENST00000482558 CCDC194A0A1B0GVG4 234 aa9.27□□□□□ -0.93
SNX13-208ENST00000482558 HSP90AA1P07900 732 aaKnown RBP9.27□□□□□ -0.93
SNX13-208ENST00000482558 EIF2S2P20042 333 aaKnown RBP9.27□□□□□ -0.93
SNX13-208ENST00000482558 FANCCQ00597 558 aa9.27□□□□□ -0.93
SNX13-208ENST00000482558 FKBP4Q02790 459 aaKnown RBP eCLIP9.27□□□□□ -0.93
SNX13-208ENST00000482558 SKOR2Q2VWA4 1001 aaPredicted RBP9.27□□□□□ -0.93
SNX13-208ENST00000482558 ILDR2Q71H61 639 aa9.27□□□□□ -0.93
SNX13-208ENST00000482558 ALDH16A1Q8IZ83 802 aa9.27□□□□□ -0.93
SNX13-208ENST00000482558 LINS1Q8NG48 757 aa9.27□□□□□ -0.93
SNX13-208ENST00000482558 CEP63Q96MT8 703 aa9.27□□□□□ -0.93
SNX13-208ENST00000482558 KRTAP9-9Q9BYP9 154 aa9.27□□□□□ -0.93
SNX13-208ENST00000482558 KRTAP9-4Q9BYQ2 154 aa9.27□□□□□ -0.93
SNX13-208ENST00000482558 SAP130Q9H0E3 1048 aa9.27□□□□□ -0.93
SNX13-208ENST00000482558 OSBPL2Q9H1P3 480 aa9.27□□□□□ -0.93
SNX13-208ENST00000482558 SLKQ9H2G2 1235 aaPredicted RBP9.27□□□□□ -0.93
SNX13-208ENST00000482558 SLC52A2Q9HAB3 445 aa9.27□□□□□ -0.93
SNX13-208ENST00000482558 CHPF2Q9P2E5 772 aa9.27□□□□□ -0.93
SNX13-208ENST00000482558 ISY1Q9ULR0 285 aaKnown RBP9.27□□□□□ -0.93
SNX13-208ENST00000482558 TTC41PQ6P2S7 1318 aa9.27□□□□□ -0.93
SNX13-208ENST00000482558 SALL3Q9BXA9 1300 aa9.27□□□□□ -0.93
SNX13-208ENST00000482558 PI4KAP2A4QPH2 592 aa9.26□□□□□ -0.93
SNX13-208ENST00000482558 FRAT2O75474 233 aaPredicted RBP9.26□□□□□ -0.93
SNX13-208ENST00000482558 NEXNQ0ZGT2 675 aa9.26□□□□□ -0.93
SNX13-208ENST00000482558 RTN1Q16799 776 aa9.26□□□□□ -0.93
SNX13-208ENST00000482558 RAB44Q7Z6P3 723 aaPredicted RBP9.26□□□□□ -0.93
SNX13-208ENST00000482558 PI4KAP1Q8N8J0 262 aa9.26□□□□□ -0.93
SNX13-208ENST00000482558 TP53INP1Q96A56 240 aa9.26□□□□□ -0.93
SNX13-208ENST00000482558 IL17RAQ96F46 866 aa9.26□□□□□ -0.93
SNX13-208ENST00000482558 MYO19Q96H55 970 aa9.26□□□□□ -0.93
SNX13-208ENST00000482558 PHACTR1Q9C0D0 580 aa9.26□□□□□ -0.93
SNX13-208ENST00000482558 FAN1Q9Y2M0 1017 aa9.26□□□□□ -0.93
SNX13-208ENST00000482558 HCN4Q9Y3Q4 1203 aa9.26□□□□□ -0.93
SNX13-208ENST00000482558 RGPD2P0DJD1 1756 aa9.26□□□□□ -0.93
SNX13-208ENST00000482558 MRC1P22897 1456 aa9.26□□□□□ -0.93
SNX13-208ENST00000482558 PXDNQ92626 1479 aa9.26□□□□□ -0.93
SNX13-208ENST00000482558 UTYO14607 1347 aa9.26□□□□□ -0.93
SNX13-208ENST00000482558 USP42Q9H9J4 1324 aaKnown RBP9.26□□□□□ -0.93
SNX13-208ENST00000482558 GOLGA6L22H0YM25 854 aa9.25□□□□□ -0.93
SNX13-208ENST00000482558 EIF3JO75822 258 aaKnown RBP9.25□□□□□ -0.93
SNX13-208ENST00000482558 PHKG2P15735 406 aa9.25□□□□□ -0.93
SNX13-208ENST00000482558 MCM4P33991 863 aa9.25□□□□□ -0.93
SNX13-208ENST00000482558 DDIT3P35638 169 aa9.25□□□□□ -0.93
SNX13-208ENST00000482558 NUCB2P80303 420 aa9.25□□□□□ -0.93
SNX13-208ENST00000482558 ARHGAP4P98171 946 aa9.25□□□□□ -0.93
SNX13-208ENST00000482558 TYRO3Q06418 890 aa9.25□□□□□ -0.93
SNX13-208ENST00000482558 COX20Q5RI15 118 aa9.25□□□□□ -0.93
SNX13-208ENST00000482558 L1TD1Q5T7N2 865 aaKnown RBP9.25□□□□□ -0.93
SNX13-208ENST00000482558 ZNF790Q6PG37 636 aa9.25□□□□□ -0.93
SNX13-208ENST00000482558 PPP1R42Q7Z4L9 355 aa9.25□□□□□ -0.93
SNX13-208ENST00000482558 TEX2Q8IWB9 1127 aa9.25□□□□□ -0.93
SNX13-208ENST00000482558 C16orf71Q8IYS4 520 aaPredicted RBP9.25□□□□□ -0.93
SNX13-208ENST00000482558 TTC5Q8N0Z6 440 aa9.25□□□□□ -0.93
SNX13-208ENST00000482558 KIF2CQ99661 725 aa9.25□□□□□ -0.93
SNX13-208ENST00000482558 ACBD3Q9H3P7 528 aa9.25□□□□□ -0.93
SNX13-208ENST00000482558 PHAXQ9H814 394 aaKnown RBP9.25□□□□□ -0.93
SNX13-208ENST00000482558 C9orf78Q9NZ63 289 aaPredicted RBP9.25□□□□□ -0.93
SNX13-208ENST00000482558 COL4A3BPQ9Y5P4 624 aa9.25□□□□□ -0.93
SNX13-208ENST00000482558 COL18A1P39060 1754 aa9.24□□□□□ -0.93
SNX13-208ENST00000482558 SCN11AQ9UI33 1791 aa9.24□□□□□ -0.93
SNX13-208ENST00000482558 PNMA6EA0A0J9YXQ4 647 aa9.24□□□□□ -0.93
SNX13-208ENST00000482558 SRGAP3O43295 1099 aa9.24□□□□□ -0.93
SNX13-208ENST00000482558 SURF6O75683 361 aaKnown RBP9.24□□□□□ -0.93
SNX13-208ENST00000482558 FAM13AO94988 1023 aa9.24□□□□□ -0.93
SNX13-208ENST00000482558 SNRPA1P09661 255 aaKnown RBP9.24□□□□□ -0.93
SNX13-208ENST00000482558 MPSTP25325 297 aa9.24□□□□□ -0.93
SNX13-208ENST00000482558 ZNF76P36508 570 aa9.24□□□□□ -0.93
SNX13-208ENST00000482558 ARID5AQ03989 594 aa9.24□□□□□ -0.93
SNX13-208ENST00000482558 ECM1Q16610 540 aa9.24□□□□□ -0.93
SNX13-208ENST00000482558 CLEC17AQ6ZS10 378 aa9.24□□□□□ -0.93
SNX13-208ENST00000482558 JAZF1Q86VZ6 243 aa9.24□□□□□ -0.93
SNX13-208ENST00000482558 CNTROBQ8N137 903 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms