RNA–Protein interactions for RNA: ENST00000482470.5

CALD1-220, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 3,941 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-220ENST00000482470 CTR9Q6PD62 1173 aa10.33□□□□□ -0.76
CALD1-220ENST00000482470 DYMQ7RTS9 669 aa10.33□□□□□ -0.76
CALD1-220ENST00000482470 SLF2Q8IX21 1173 aa10.33□□□□□ -0.76
CALD1-220ENST00000482470 ZNF397Q8NF99 534 aaPredicted RBP10.33□□□□□ -0.76
CALD1-220ENST00000482470 ZFP91Q96JP5 570 aaPredicted RBP10.33□□□□□ -0.76
CALD1-220ENST00000482470 EYA3Q99504 573 aa10.33□□□□□ -0.76
CALD1-220ENST00000482470 DCP1AQ9NPI6 582 aaPredicted RBP10.33□□□□□ -0.76
CALD1-220ENST00000482470 ARPP21Q9UBL0 812 aaPredicted RBP10.33□□□□□ -0.76
CALD1-220ENST00000482470 PPP1R1BQ9UD71 204 aaPredicted RBP10.33□□□□□ -0.76
CALD1-220ENST00000482470 KRT9P35527 623 aa10.32□□□□□ -0.76
CALD1-220ENST00000482470 SCNN1DP51172 638 aa10.32□□□□□ -0.76
CALD1-220ENST00000482470 ETF1P62495 437 aaKnown RBP10.32□□□□□ -0.76
CALD1-220ENST00000482470 RAD51AP2Q09MP3 1159 aa10.32□□□□□ -0.76
CALD1-220ENST00000482470 MCM6Q14566 821 aa10.32□□□□□ -0.76
CALD1-220ENST00000482470 TDRD12Q587J7 1177 aaKnown RBP10.32□□□□□ -0.76
CALD1-220ENST00000482470 CACNA2D4Q7Z3S7 1137 aa10.32□□□□□ -0.76
CALD1-220ENST00000482470 LRRC47Q8N1G4 583 aaKnown RBP10.32□□□□□ -0.76
CALD1-220ENST00000482470 NELFBQ8WX92 580 aa10.32□□□□□ -0.76
CALD1-220ENST00000482470 CCDC102AQ96A19 550 aa10.32□□□□□ -0.76
CALD1-220ENST00000482470 SRPRBQ9Y5M8 271 aaKnown RBP10.32□□□□□ -0.76
CALD1-220ENST00000482470 CAMTA1Q9Y6Y1 1673 aa10.32□□□□□ -0.76
CALD1-220ENST00000482470 IKBKBO14920 756 aa10.32□□□□□ -0.76
CALD1-220ENST00000482470 RHOXF2BP0C7M4 288 aa10.32□□□□□ -0.76
CALD1-220ENST00000482470 MATR3P43243 847 aaKnown RBP eCLIP10.32□□□□□ -0.76
CALD1-220ENST00000482470 BTDP43251 543 aa10.32□□□□□ -0.76
CALD1-220ENST00000482470 PDE4DQ08499 809 aa10.32□□□□□ -0.76
CALD1-220ENST00000482470 PAK1Q13153 545 aa10.32□□□□□ -0.76
CALD1-220ENST00000482470 ARMCX5Q6P1M9 558 aa10.32□□□□□ -0.76
CALD1-220ENST00000482470 RHOXF2Q9BQY4 288 aa10.32□□□□□ -0.76
CALD1-220ENST00000482470 MMRN2Q9H8L6 949 aa10.32□□□□□ -0.76
CALD1-220ENST00000482470 ABCC12Q96J65 1359 aa10.32□□□□□ -0.76
CALD1-220ENST00000482470 USP17L2Q6R6M4 530 aa10.32□□□□□ -0.76
CALD1-220ENST00000482470 NKX2-3Q8TAU0 364 aa10.32□□□□□ -0.76
CALD1-220ENST00000482470 SLF1Q9BQI6 1058 aa10.32□□□□□ -0.76
CALD1-220ENST00000482470 ATP8A2Q9NTI2 1148 aa10.32□□□□□ -0.76
CALD1-220ENST00000482470 PPP2R2CQ9Y2T4 447 aa10.32□□□□□ -0.76
CALD1-220ENST00000482470 GOLGA6L9A6NEM1 432 aa10.31□□□□□ -0.76
CALD1-220ENST00000482470 SMCO2A6NFE2 343 aa10.31□□□□□ -0.76
CALD1-220ENST00000482470 DOK7Q18PE1 504 aa10.31□□□□□ -0.76
CALD1-220ENST00000482470 TICAM2Q86XR7 235 aa10.31□□□□□ -0.76
CALD1-220ENST00000482470 KRT222Q8N1A0 295 aa10.31□□□□□ -0.76
CALD1-220ENST00000482470 LINC00116Q8NCU8 138 aa10.31□□□□□ -0.76
CALD1-220ENST00000482470 NBPF3Q9H094 633 aa10.31□□□□□ -0.76
CALD1-220ENST00000482470 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.31□□□□□ -0.761e-6■■■□□ 17.8
CALD1-220ENST00000482470 TOPAZ1Q8N9V7 1692 aa10.31□□□□□ -0.76
CALD1-220ENST00000482470 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.31□□□□□ -0.76
CALD1-220ENST00000482470 TECP42680 631 aa10.31□□□□□ -0.76
CALD1-220ENST00000482470 ARID5AQ03989 594 aa10.31□□□□□ -0.76
CALD1-220ENST00000482470 SPAG1Q07617 926 aa10.31□□□□□ -0.76
CALD1-220ENST00000482470 SPA17Q15506 151 aa10.31□□□□□ -0.76
CALD1-220ENST00000482470 SH3RF3Q8TEJ3 882 aaPredicted RBP10.31□□□□□ -0.76
CALD1-220ENST00000482470 CAPZA3Q96KX2 299 aa10.31□□□□□ -0.76
CALD1-220ENST00000482470 RAB34Q9BZG1 259 aa10.31□□□□□ -0.76
CALD1-220ENST00000482470 RGPD1P0DJD0 1748 aa10.31□□□□□ -0.76
CALD1-220ENST00000482470 FOXP2O15409 715 aa10.31□□□□□ -0.76
CALD1-220ENST00000482470 FGFR2P21802 821 aa10.31□□□□□ -0.76
CALD1-220ENST00000482470 GNA11P29992 359 aa10.31□□□□□ -0.76
CALD1-220ENST00000482470 AMPD3Q01432 767 aa10.31□□□□□ -0.76
CALD1-220ENST00000482470 BMS1Q14692 1282 aaKnown RBP10.31□□□□□ -0.76
CALD1-220ENST00000482470 CLEC4GQ6UXB4 293 aa10.31□□□□□ -0.76
CALD1-220ENST00000482470 RBM43Q6ZSC3 357 aaKnown RBP10.31□□□□□ -0.76
CALD1-220ENST00000482470 ARHGEF1Q92888 912 aaKnown RBP10.31□□□□□ -0.76
CALD1-220ENST00000482470 SRRTQ9BXP5 876 aaKnown RBP10.31□□□□□ -0.76
CALD1-220ENST00000482470 TMEM51Q9NW97 253 aa10.31□□□□□ -0.76
CALD1-220ENST00000482470 LUC7L2Q9Y383 392 aaKnown RBP10.31□□□□□ -0.76
CALD1-220ENST00000482470 PRPF3O43395 683 aaKnown RBP10.3□□□□□ -0.76
CALD1-220ENST00000482470 PLCD1P51178 756 aa10.3□□□□□ -0.76
CALD1-220ENST00000482470 NCBP1Q09161 790 aaKnown RBP10.3□□□□□ -0.76
CALD1-220ENST00000482470 TBC1D8BQ0IIM8 1120 aa10.3□□□□□ -0.76
CALD1-220ENST00000482470 CCDC40Q4G0X9 1142 aa10.3□□□□□ -0.76
CALD1-220ENST00000482470 CSGALNACT2Q8N6G5 542 aa10.3□□□□□ -0.76
CALD1-220ENST00000482470 VGLL2Q8N8G2 317 aa10.3□□□□□ -0.76
CALD1-220ENST00000482470 PAGE5Q96GU1 130 aa10.3□□□□□ -0.76
CALD1-220ENST00000482470 PYM1Q9BRP8 204 aaKnown RBP10.3□□□□□ -0.76
CALD1-220ENST00000482470 JADE2Q9NQC1 790 aa10.3□□□□□ -0.76
CALD1-220ENST00000482470 TCEAL9Q9UHQ7 104 aa10.3□□□□□ -0.76
CALD1-220ENST00000482470 CACNA1FO60840 1977 aa10.3□□□□□ -0.76
CALD1-220ENST00000482470 WDR19Q8NEZ3 1342 aa10.3□□□□□ -0.76
CALD1-220ENST00000482470 NALCNQ8IZF0 1738 aa10.3□□□□□ -0.76
CALD1-220ENST00000482470 FAM208AQ9UK61 1670 aaKnown RBP10.3□□□□□ -0.76
CALD1-220ENST00000482470 FAM170AA1A519 330 aa10.3□□□□□ -0.76
CALD1-220ENST00000482470 HLA-DOAP06340 250 aa10.3□□□□□ -0.76
CALD1-220ENST00000482470 SLFN14P0C7P3 912 aa10.3□□□□□ -0.76
CALD1-220ENST00000482470 CASP14P31944 242 aa10.3□□□□□ -0.76
CALD1-220ENST00000482470 FMR1Q06787 632 aaKnown RBP eCLIP10.3□□□□□ -0.76
CALD1-220ENST00000482470 CCDC181Q5TID7 509 aa10.3□□□□□ -0.76
CALD1-220ENST00000482470 TMTC3Q6ZXV5 915 aa10.3□□□□□ -0.76
CALD1-220ENST00000482470 TXNRD3Q86VQ6 643 aa10.3□□□□□ -0.76
CALD1-220ENST00000482470 STAG2Q8N3U4 1231 aa10.3□□□□□ -0.76
CALD1-220ENST00000482470 SRBD1Q8N5C6 995 aaKnown RBP10.3□□□□□ -0.76
CALD1-220ENST00000482470 CCDC43Q96MW1 224 aaKnown RBP10.3□□□□□ -0.76
CALD1-220ENST00000482470 TBC1D7Q9P0N9 293 aa10.3□□□□□ -0.76
CALD1-220ENST00000482470 RGPD2P0DJD1 1756 aa10.3□□□□□ -0.76
CALD1-220ENST00000482470 TCRBV5S4A2TA0A5A2 114 aa10.3□□□□□ -0.76
CALD1-220ENST00000482470 PP2D1A8MPX8 630 aa10.3□□□□□ -0.76
CALD1-220ENST00000482470 TEX33O43247 280 aa10.3□□□□□ -0.76
CALD1-220ENST00000482470 AKR1B10O60218 316 aa10.3□□□□□ -0.76
CALD1-220ENST00000482470 CCZ1BP86790 482 aa10.3□□□□□ -0.76
CALD1-220ENST00000482470 CCZ1P86791 482 aaPredicted RBP10.3□□□□□ -0.76
CALD1-220ENST00000482470 PPP2R3AQ06190 1150 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms