RNA–Protein interactions for RNA: ENST00000482195.5

DDX39B-220, Transcript of DExD-box helicase 39B, humanhuman

TSL 2

Gene DDX39B, Length 1,232 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-220ENST00000482195 USP17L18D6R9N7 530 aa12.56□□□□□ -0.4
DDX39B-220ENST00000482195 USP17L22D6RA61 530 aa12.56□□□□□ -0.4
DDX39B-220ENST00000482195 USP17L17D6RBQ6 530 aa12.56□□□□□ -0.4
DDX39B-220ENST00000482195 USP17L19D6RCP7 530 aa12.56□□□□□ -0.4
DDX39B-220ENST00000482195 USP17L20D6RJB6 530 aa12.56□□□□□ -0.4
DDX39B-220ENST00000482195 ZMYND10O75800 440 aa12.56□□□□□ -0.4
DDX39B-220ENST00000482195 USP14P54578 494 aa12.56□□□□□ -0.4
DDX39B-220ENST00000482195 USP17L24Q0WX57 530 aa12.56□□□□□ -0.4
DDX39B-220ENST00000482195 MAP2K5Q13163 448 aa12.56□□□□□ -0.4
DDX39B-220ENST00000482195 LRIT3Q3SXY7 679 aa12.56□□□□□ -0.4
DDX39B-220ENST00000482195 ZKSCAN2Q63HK3 967 aa12.56□□□□□ -0.4
DDX39B-220ENST00000482195 GPR153Q6NV75 609 aa12.56□□□□□ -0.4
DDX39B-220ENST00000482195 ITPRIPQ8IWB1 547 aa12.56□□□□□ -0.4
DDX39B-220ENST00000482195 SLC24A3Q9HC58 644 aa12.56□□□□□ -0.4
DDX39B-220ENST00000482195 CABP5Q9NP86 173 aa12.56□□□□□ -0.4
DDX39B-220ENST00000482195 DBNLQ9UJU6 430 aaKnown RBP12.56□□□□□ -0.4
DDX39B-220ENST00000482195 RABGAP1Q9Y3P9 1069 aa12.56□□□□□ -0.4
DDX39B-220ENST00000482195 CNMDO75829 334 aa12.55□□□□□ -0.4
DDX39B-220ENST00000482195 VCAM1P19320 739 aa12.55□□□□□ -0.4
DDX39B-220ENST00000482195 ATN1P54259 1190 aaPredicted RBP12.55□□□□□ -0.4
DDX39B-220ENST00000482195 ABCB5Q2M3G0 1257 aa12.55□□□□□ -0.4
DDX39B-220ENST00000482195 CERKLQ49MI3 558 aaPredicted RBP12.55□□□□□ -0.4
DDX39B-220ENST00000482195 METTL16Q86W50 562 aaKnown RBP12.55□□□□□ -0.4
DDX39B-220ENST00000482195 USP6NLQ92738 828 aa12.55□□□□□ -0.4
DDX39B-220ENST00000482195 EDC3Q96F86 508 aaKnown RBP12.55□□□□□ -0.4
DDX39B-220ENST00000482195 LBHD1Q9BQE6 289 aaPredicted RBP12.55□□□□□ -0.4
DDX39B-220ENST00000482195 SENP6Q9GZR1 1112 aaPredicted RBP12.55□□□□□ -0.4
DDX39B-220ENST00000482195 SERPINB13Q9UIV8 391 aa12.55□□□□□ -0.4
DDX39B-220ENST00000482195 ZNF236Q9UL36 1845 aa12.54□□□□□ -0.4
DDX39B-220ENST00000482195 SLC15A5A6NIM6 579 aa12.54□□□□□ -0.4
DDX39B-220ENST00000482195 MPHOSPH10O00566 681 aaKnown RBP12.54□□□□□ -0.4
DDX39B-220ENST00000482195 COL6A1P12109 1028 aa12.54□□□□□ -0.4
DDX39B-220ENST00000482195 ATP8B2P98198 1209 aa12.54□□□□□ -0.4
DDX39B-220ENST00000482195 ATP2B2Q01814 1243 aa12.54□□□□□ -0.4
DDX39B-220ENST00000482195 LHX8Q68G74 356 aa12.54□□□□□ -0.4
DDX39B-220ENST00000482195 TTC6Q86TZ1 520 aa12.54□□□□□ -0.4
DDX39B-220ENST00000482195 CERS3Q8IU89 383 aa12.54□□□□□ -0.4
DDX39B-220ENST00000482195 SSH3Q8TE77 659 aa12.54□□□□□ -0.4
DDX39B-220ENST00000482195 C12orf42Q96LP6 360 aa12.54□□□□□ -0.4
DDX39B-220ENST00000482195 RPAP3Q9H6T3 665 aaPredicted RBP12.54□□□□□ -0.4
DDX39B-220ENST00000482195 FLRT1Q9NZU1 646 aa12.54□□□□□ -0.4
DDX39B-220ENST00000482195 PRKAG2Q9UGJ0 569 aa12.54□□□□□ -0.4
DDX39B-220ENST00000482195 STXBP5LQ9Y2K9 1186 aa12.54□□□□□ -0.4
DDX39B-220ENST00000482195 RLFQ13129 1914 aa12.54□□□□□ -0.4
DDX39B-220ENST00000482195 BAZ2AQ9UIF9 1905 aaKnown RBP12.54□□□□□ -0.4
DDX39B-220ENST00000482195 A0A0G2JMZ2 1700 aa12.54□□□□□ -0.4
DDX39B-220ENST00000482195 POLR3DP05423 398 aaPredicted RBP12.53□□□□□ -0.4
DDX39B-220ENST00000482195 MAP3K12Q12852 859 aa12.53□□□□□ -0.4
DDX39B-220ENST00000482195 POTEEQ6S8J3 1075 aa12.53□□□□□ -0.4
DDX39B-220ENST00000482195 CATSPERGQ6ZRH7 1159 aa12.53□□□□□ -0.4
DDX39B-220ENST00000482195 ACER1Q8TDN7 264 aa12.53□□□□□ -0.4
DDX39B-220ENST00000482195 ZNF512BQ96KM6 892 aaPredicted RBP12.53□□□□□ -0.4
DDX39B-220ENST00000482195 TANGO6Q9C0B7 1094 aa12.53□□□□□ -0.4
DDX39B-220ENST00000482195 BCL11AQ9H165 835 aa12.53□□□□□ -0.4
DDX39B-220ENST00000482195 EHD4Q9H223 541 aa12.53□□□□□ -0.4
DDX39B-220ENST00000482195 MTMR10Q9NXD2 777 aa12.53□□□□□ -0.4
DDX39B-220ENST00000482195 DDX20Q9UHI6 824 aaKnown RBP12.53□□□□□ -0.4
DDX39B-220ENST00000482195 COL11A1P12107 1806 aaPredicted RBP12.53□□□□□ -0.4
DDX39B-220ENST00000482195 DNAH12Q6ZR08 3092 aa12.53□□□□□ -0.4
DDX39B-220ENST00000482195 ZNFX1Q9P2E3 1918 aaKnown RBP12.52□□□□□ -0.4
DDX39B-220ENST00000482195 A0A0C4DFX4 3053 aa12.52□□□□□ -0.4
DDX39B-220ENST00000482195 SPDYE16A6NNV3 312 aaPredicted RBP12.52□□□□□ -0.41
DDX39B-220ENST00000482195 MSCO60682 206 aa12.52□□□□□ -0.41
DDX39B-220ENST00000482195 PTPREP23469 700 aa12.52□□□□□ -0.41
DDX39B-220ENST00000482195 CYP2C19P33261 490 aa12.52□□□□□ -0.41
DDX39B-220ENST00000482195 TATDN1Q6P1N9 297 aa12.52□□□□□ -0.41
DDX39B-220ENST00000482195 AACSQ86V21 672 aa12.52□□□□□ -0.41
DDX39B-220ENST00000482195 PDCD7Q8N8D1 485 aaKnown RBP12.52□□□□□ -0.41
DDX39B-220ENST00000482195 EAF2Q96CJ1 260 aaPredicted RBP12.52□□□□□ -0.41
DDX39B-220ENST00000482195 FAM161BQ96MY7 647 aa12.52□□□□□ -0.41
DDX39B-220ENST00000482195 KIAA1683Q9H0B3 1180 aa12.52□□□□□ -0.41
DDX39B-220ENST00000482195 ANTXR1Q9H6X2 564 aa12.52□□□□□ -0.41
DDX39B-220ENST00000482195 BTBD7Q9P203 1132 aa12.52□□□□□ -0.41
DDX39B-220ENST00000482195 ATP11BQ9Y2G3 1177 aa12.52□□□□□ -0.41
DDX39B-220ENST00000482195 PARP14Q460N5 1801 aa12.52□□□□□ -0.41
DDX39B-220ENST00000482195 MYH7P12883 1935 aa12.52□□□□□ -0.41
DDX39B-220ENST00000482195 PLXNA1Q9UIW2 1896 aa12.51□□□□□ -0.41
DDX39B-220ENST00000482195 MAGEB6P1A0A0J9YX57 407 aa12.51□□□□□ -0.41
DDX39B-220ENST00000482195 IGSF3O75054 1194 aa12.51□□□□□ -0.41
DDX39B-220ENST00000482195 SHMT1P34896 483 aa12.51□□□□□ -0.41
DDX39B-220ENST00000482195 MLLT3P42568 568 aaPredicted RBP12.51□□□□□ -0.41
DDX39B-220ENST00000482195 RTP1P59025 263 aa12.51□□□□□ -0.41
DDX39B-220ENST00000482195 EVX2Q03828 476 aa12.51□□□□□ -0.41
DDX39B-220ENST00000482195 DSG2Q14126 1118 aa12.51□□□□□ -0.41
DDX39B-220ENST00000482195 GRB14Q14449 540 aa12.51□□□□□ -0.41
DDX39B-220ENST00000482195 PLS1Q14651 629 aa12.51□□□□□ -0.41
DDX39B-220ENST00000482195 GJC2Q5T442 439 aaPredicted RBP12.51□□□□□ -0.41
DDX39B-220ENST00000482195 ANO1Q5XXA6 986 aa12.51□□□□□ -0.41
DDX39B-220ENST00000482195 DPP9Q86TI2 863 aa12.51□□□□□ -0.41
DDX39B-220ENST00000482195 NPLOC4Q8TAT6 608 aa12.51□□□□□ -0.41
DDX39B-220ENST00000482195 LPAR1Q92633 364 aa12.51□□□□□ -0.41
DDX39B-220ENST00000482195 PRDM5Q9NQX1 630 aaPredicted RBP12.51□□□□□ -0.41
DDX39B-220ENST00000482195 EXOC6BQ9Y2D4 811 aa12.51□□□□□ -0.41
DDX39B-220ENST00000482195 UNC80Q8N2C7 3258 aa12.51□□□□□ -0.41
DDX39B-220ENST00000482195 KBTBD13C9JR72 458 aa12.5□□□□□ -0.41
DDX39B-220ENST00000482195 CCER2I3L3R5 266 aa12.5□□□□□ -0.41
DDX39B-220ENST00000482195 DNM1LO00429 736 aa12.5□□□□□ -0.41
DDX39B-220ENST00000482195 PLCD1P51178 756 aa12.5□□□□□ -0.41
DDX39B-220ENST00000482195 CLCN6P51797 869 aa12.5□□□□□ -0.41
DDX39B-220ENST00000482195 SEPT2Q15019 361 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms