RNA–Protein interactions for RNA: ENST00000481897.1

RAB3IP-206, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 3,003 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-206ENST00000481897 STRNO43815 780 aa3.2□□□□□ -1.9
RAB3IP-206ENST00000481897 PLIN1O60240 522 aa3.2□□□□□ -1.9
RAB3IP-206ENST00000481897 CDKL5O76039 1030 aa3.2□□□□□ -1.9
RAB3IP-206ENST00000481897 MBD4O95243 580 aa3.2□□□□□ -1.9
RAB3IP-206ENST00000481897 TTLL1O95922 423 aa3.2□□□□□ -1.9
RAB3IP-206ENST00000481897 SCP2P22307 547 aa3.2□□□□□ -1.9
RAB3IP-206ENST00000481897 KLRK1P26718 216 aa3.2□□□□□ -1.9
RAB3IP-206ENST00000481897 HOXD10P28358 340 aa3.2□□□□□ -1.9
RAB3IP-206ENST00000481897 MAPK4P31152 587 aa3.2□□□□□ -1.9
RAB3IP-206ENST00000481897 EMP3P54852 163 aa3.2□□□□□ -1.9
RAB3IP-206ENST00000481897 PPARAQ07869 468 aa3.2□□□□□ -1.9
RAB3IP-206ENST00000481897 USP17L24Q0WX57 530 aa3.2□□□□□ -1.9
RAB3IP-206ENST00000481897 TRDNQ13061 729 aa3.2□□□□□ -1.9
RAB3IP-206ENST00000481897 FAM110CQ1W6H9 321 aa3.2□□□□□ -1.9
RAB3IP-206ENST00000481897 DEFB115Q30KQ5 88 aa3.2□□□□□ -1.9
RAB3IP-206ENST00000481897 SMIM5Q71RC9 77 aa3.2□□□□□ -1.9
RAB3IP-206ENST00000481897 IQCA1Q86XH1 822 aa3.2□□□□□ -1.9
RAB3IP-206ENST00000481897 ZNF280CQ8ND82 737 aa3.2□□□□□ -1.9
RAB3IP-206ENST00000481897 CHST13Q8NET6 341 aa3.2□□□□□ -1.9
RAB3IP-206ENST00000481897 NCOA7Q8NI08 942 aa3.2□□□□□ -1.9
RAB3IP-206ENST00000481897 MORC4Q8TE76 937 aa3.2□□□□□ -1.9
RAB3IP-206ENST00000481897 MTMR8Q96EF0 704 aa3.2□□□□□ -1.9
RAB3IP-206ENST00000481897 PRMT6Q96LA8 375 aaPredicted RBP3.2□□□□□ -1.9
RAB3IP-206ENST00000481897 SPZ1Q9BXG8 430 aa3.2□□□□□ -1.9
RAB3IP-206ENST00000481897 LSG1Q9H089 658 aaKnown RBP3.2□□□□□ -1.9
RAB3IP-206ENST00000481897 CCDC8Q9H0W5 538 aaPredicted RBP3.2□□□□□ -1.9
RAB3IP-206ENST00000481897 MROH8Q9H579 483 aa3.2□□□□□ -1.9
RAB3IP-206ENST00000481897 C1orf115Q9H7X2 142 aa3.2□□□□□ -1.9
RAB3IP-206ENST00000481897 UPF2Q9HAU5 1272 aaKnown RBP3.2□□□□□ -1.9
RAB3IP-206ENST00000481897 TLR7Q9NYK1 1049 aaKnown RBP3.2□□□□□ -1.9
RAB3IP-206ENST00000481897 TMOD4Q9NZQ9 345 aa3.2□□□□□ -1.9
RAB3IP-206ENST00000481897 GTF3C3Q9Y5Q9 886 aa3.2□□□□□ -1.9
RAB3IP-206ENST00000481897 SLC4A4Q9Y6R1 1079 aa3.2□□□□□ -1.9
RAB3IP-206ENST00000481897 MYH15Q9Y2K3 1946 aa3.2□□□□□ -1.9
RAB3IP-206ENST00000481897 ABCB11O95342 1321 aa3.2□□□□□ -1.9
RAB3IP-206ENST00000481897 PLXNA1Q9UIW2 1896 aa3.2□□□□□ -1.9
RAB3IP-206ENST00000481897 ZNF213O14771 459 aa3.19□□□□□ -1.9
RAB3IP-206ENST00000481897 DHX16O60231 1041 aaKnown RBP3.19□□□□□ -1.9
RAB3IP-206ENST00000481897 IDH1O75874 414 aaKnown RBP3.19□□□□□ -1.9
RAB3IP-206ENST00000481897 HSPD1P10809 573 aaKnown RBP3.19□□□□□ -1.9
RAB3IP-206ENST00000481897 XRCC5P13010 732 aaKnown RBP3.19□□□□□ -1.9
RAB3IP-206ENST00000481897 GSPT1P15170 499 aaKnown RBP3.19□□□□□ -1.9
RAB3IP-206ENST00000481897 SHMT1P34896 483 aa3.19□□□□□ -1.9
RAB3IP-206ENST00000481897 CTCFP49711 727 aaPredicted RBP3.19□□□□□ -1.9
RAB3IP-206ENST00000481897 BACE1P56817 501 aa3.19□□□□□ -1.9
RAB3IP-206ENST00000481897 CHAF1AQ13111 956 aaPredicted RBP3.19□□□□□ -1.9
RAB3IP-206ENST00000481897 NECTIN1Q15223 517 aa3.19□□□□□ -1.9
RAB3IP-206ENST00000481897 OLFML2BQ68BL8 750 aa3.19□□□□□ -1.9
RAB3IP-206ENST00000481897 CTR9Q6PD62 1173 aa3.19□□□□□ -1.9
RAB3IP-206ENST00000481897 KIAA0825Q8IV33 1275 aa3.19□□□□□ -1.9
RAB3IP-206ENST00000481897 ANKLE1Q8NAG6 615 aa3.19□□□□□ -1.9
RAB3IP-206ENST00000481897 PXYLP1Q8TE99 480 aa3.19□□□□□ -1.9
RAB3IP-206ENST00000481897 CCDC12Q8WUD4 166 aaPredicted RBP3.19□□□□□ -1.9
RAB3IP-206ENST00000481897 WASF1Q92558 559 aa3.19□□□□□ -1.9
RAB3IP-206ENST00000481897 ZNF274Q96GC6 653 aaPredicted RBP3.19□□□□□ -1.9
RAB3IP-206ENST00000481897 CSRNP1Q96S65 589 aa3.19□□□□□ -1.9
RAB3IP-206ENST00000481897 VCPKMTQ9H867 229 aa3.19□□□□□ -1.9
RAB3IP-206ENST00000481897 EHMT1Q9H9B1 1298 aa3.19□□□□□ -1.9
RAB3IP-206ENST00000481897 XPO5Q9HAV4 1204 aaKnown RBP eCLIP3.19□□□□□ -1.9
RAB3IP-206ENST00000481897 ZFYVE28Q9HCC9 887 aa3.19□□□□□ -1.9
RAB3IP-206ENST00000481897 SH2B1Q9NRF2 756 aaPredicted RBP3.19□□□□□ -1.9
RAB3IP-206ENST00000481897 HOXC10Q9NYD6 342 aa3.19□□□□□ -1.9
RAB3IP-206ENST00000481897 WWC3Q9ULE0 1092 aa3.19□□□□□ -1.9
RAB3IP-206ENST00000481897 Q9Y3F1 56 aa3.19□□□□□ -1.9
RAB3IP-206ENST00000481897 WDR33Q9C0J8 1336 aaKnown RBP3.19□□□□□ -1.9
RAB3IP-206ENST00000481897 MYH6P13533 1939 aa3.19□□□□□ -1.9
RAB3IP-206ENST00000481897 USP17L10C9JJH3 530 aa3.19□□□□□ -1.9
RAB3IP-206ENST00000481897 MSCO60682 206 aa3.19□□□□□ -1.9
RAB3IP-206ENST00000481897 IGHA2P01877 340 aa3.19□□□□□ -1.9
RAB3IP-206ENST00000481897 PTPRAP18433 802 aa3.19□□□□□ -1.9
RAB3IP-206ENST00000481897 MCM5P33992 734 aa3.19□□□□□ -1.9
RAB3IP-206ENST00000481897 NMIQ13287 307 aaPredicted RBP3.19□□□□□ -1.9
RAB3IP-206ENST00000481897 RABEP1Q15276 862 aa3.19□□□□□ -1.9
RAB3IP-206ENST00000481897 ABCB5Q2M3G0 1257 aa3.19□□□□□ -1.9
RAB3IP-206ENST00000481897 CERKLQ49MI3 558 aaPredicted RBP3.19□□□□□ -1.9
RAB3IP-206ENST00000481897 VPS53Q5VIR6 699 aa3.19□□□□□ -1.9
RAB3IP-206ENST00000481897 KCNV1Q6PIU1 500 aa3.19□□□□□ -1.9
RAB3IP-206ENST00000481897 MOXD1Q6UVY6 613 aa3.19□□□□□ -1.9
RAB3IP-206ENST00000481897 NIPA1Q7RTP0 329 aa3.19□□□□□ -1.9
RAB3IP-206ENST00000481897 PDCD7Q8N8D1 485 aaKnown RBP3.19□□□□□ -1.9
RAB3IP-206ENST00000481897 KLHDC4Q8TBB5 520 aa3.19□□□□□ -1.9
RAB3IP-206ENST00000481897 SH3RF3Q8TEJ3 882 aaPredicted RBP3.19□□□□□ -1.9
RAB3IP-206ENST00000481897 OSBP2Q969R2 916 aa3.19□□□□□ -1.9
RAB3IP-206ENST00000481897 IL1RAPL2Q9NP60 686 aa3.19□□□□□ -1.9
RAB3IP-206ENST00000481897 RYDENQ9NUL5 291 aaKnown RBP3.19□□□□□ -1.9
RAB3IP-206ENST00000481897 ZMYM2Q9UBW7 1377 aa3.19□□□□□ -1.9
RAB3IP-206ENST00000481897 ERICH2A1L162 156 aa3.19□□□□□ -1.9
RAB3IP-206ENST00000481897 SLC15A5A6NIM6 579 aa3.19□□□□□ -1.9
RAB3IP-206ENST00000481897 NKRFO15226 690 aaKnown RBP eCLIP3.19□□□□□ -1.9
RAB3IP-206ENST00000481897 POLR3DP05423 398 aaPredicted RBP3.19□□□□□ -1.9
RAB3IP-206ENST00000481897 RASA1P20936 1047 aa3.19□□□□□ -1.9
RAB3IP-206ENST00000481897 TDO2P48775 406 aa3.19□□□□□ -1.9
RAB3IP-206ENST00000481897 CDK8P49336 464 aa3.19□□□□□ -1.9
RAB3IP-206ENST00000481897 GRM4Q14833 912 aa3.19□□□□□ -1.9
RAB3IP-206ENST00000481897 RTL5Q5HYW3 569 aaPredicted RBP3.19□□□□□ -1.9
RAB3IP-206ENST00000481897 MFSD6Q6ZSS7 791 aa3.19□□□□□ -1.9
RAB3IP-206ENST00000481897 MB21D2Q8IYB1 491 aaPredicted RBP3.19□□□□□ -1.9
RAB3IP-206ENST00000481897 ZNF444Q8N0Y2 327 aaPredicted RBP3.19□□□□□ -1.9
RAB3IP-206ENST00000481897 LCORLQ8N3X6 602 aa3.19□□□□□ -1.9
RAB3IP-206ENST00000481897 CRACR2BQ8N4Y2 399 aaPredicted RBP3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms