RNA–Protein interactions for RNA: ENST00000481644.1

HSPG2-210, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 839 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-210ENST00000481644 VCPKMTQ9H867 229 aa22.3■■□□□ 1.16
HSPG2-210ENST00000481644 RBBP6Q7Z6E9 1792 aaKnown RBP22.3■■□□□ 1.16
HSPG2-210ENST00000481644 GRK4P32298 578 aa22.29■■□□□ 1.16
HSPG2-210ENST00000481644 FLT3LGP49771 235 aa22.29■■□□□ 1.16
HSPG2-210ENST00000481644 ERVK-9P63128 1117 aa22.29■■□□□ 1.16
HSPG2-210ENST00000481644 ERVK-24P63145 666 aa22.29■■□□□ 1.16
HSPG2-210ENST00000481644 KIAA1755Q5JYT7 1200 aa22.29■■□□□ 1.16
HSPG2-210ENST00000481644 ZNF589Q86UQ0 364 aaPredicted RBP22.29■■□□□ 1.16
HSPG2-210ENST00000481644 SPICE1Q8N0Z3 855 aa22.29■■□□□ 1.16
HSPG2-210ENST00000481644 CCDC171Q6TFL3 1326 aa22.29■■□□□ 1.16
HSPG2-210ENST00000481644 MYH4Q9Y623 1939 aa22.28■■□□□ 1.16
HSPG2-210ENST00000481644 MLLT1Q03111 559 aaPredicted RBP22.28■■□□□ 1.16
HSPG2-210ENST00000481644 POTEEQ6S8J3 1075 aa22.28■■□□□ 1.16
HSPG2-210ENST00000481644 DIAPH3Q9NSV4 1193 aa22.28■■□□□ 1.16
HSPG2-210ENST00000481644 RABGAP1Q9Y3P9 1069 aa22.28■■□□□ 1.16
HSPG2-210ENST00000481644 SPDYE16A6NNV3 312 aaPredicted RBP22.27■■□□□ 1.16
HSPG2-210ENST00000481644 HIP1O00291 1037 aa22.27■■□□□ 1.16
HSPG2-210ENST00000481644 MYCP01106 439 aaPredicted RBP22.27■■□□□ 1.16
HSPG2-210ENST00000481644 CENPFP49454 3210 aa22.27■■□□□ 1.16
HSPG2-210ENST00000481644 MFAP1P55081 439 aaKnown RBP22.27■■□□□ 1.16
HSPG2-210ENST00000481644 ALX1Q15699 326 aa22.27■■□□□ 1.16
HSPG2-210ENST00000481644 Q3C1V9 767 aa22.27■■□□□ 1.16
HSPG2-210ENST00000481644 LBX2Q6XYB7 198 aa22.27■■□□□ 1.16
HSPG2-210ENST00000481644 SLAIN1Q8ND83 568 aa22.27■■□□□ 1.16
HSPG2-210ENST00000481644 GOPCQ9HD26 462 aa22.27■■□□□ 1.16
HSPG2-210ENST00000481644 RLFQ13129 1914 aa22.26■■□□□ 1.15
HSPG2-210ENST00000481644 WDR46O15213 610 aaKnown RBP22.26■■□□□ 1.15
HSPG2-210ENST00000481644 RAD21O60216 631 aa22.26■■□□□ 1.15
HSPG2-210ENST00000481644 ADCY3O60266 1144 aa22.26■■□□□ 1.15
HSPG2-210ENST00000481644 HSPD1P10809 573 aaKnown RBP22.26■■□□□ 1.15
HSPG2-210ENST00000481644 CTDSPL2Q05D32 466 aa22.26■■□□□ 1.15
HSPG2-210ENST00000481644 IRF5Q13568 498 aa22.26■■□□□ 1.15
HSPG2-210ENST00000481644 COG2Q14746 738 aa22.26■■□□□ 1.15
HSPG2-210ENST00000481644 TTC22Q5TAA0 569 aa22.26■■□□□ 1.15
HSPG2-210ENST00000481644 CWC27Q6UX04 472 aaKnown RBP22.26■■□□□ 1.15
HSPG2-210ENST00000481644 CCAR1Q8IX12 1150 aaKnown RBP22.26■■□□□ 1.15
HSPG2-210ENST00000481644 TMEM106CQ9BVX2 250 aa22.26■■□□□ 1.15
HSPG2-210ENST00000481644 NYAP2Q9P242 653 aa22.26■■□□□ 1.15
HSPG2-210ENST00000481644 PARP14Q460N5 1801 aa22.26■■□□□ 1.15
HSPG2-210ENST00000481644 PLIN4Q96Q06 1357 aa22.25■■□□□ 1.15
HSPG2-210ENST00000481644 PLXNB2O15031 1838 aa22.25■■□□□ 1.15
HSPG2-210ENST00000481644 IGKV6D-41A0A0C4DH26 115 aa22.25■■□□□ 1.15
HSPG2-210ENST00000481644 POTEFA5A3E0 1075 aa22.25■■□□□ 1.15
HSPG2-210ENST00000481644 CNMDO75829 334 aa22.25■■□□□ 1.15
HSPG2-210ENST00000481644 FGAP02671 866 aa22.25■■□□□ 1.15
HSPG2-210ENST00000481644 TSPY3P0CV98 308 aa22.25■■□□□ 1.15
HSPG2-210ENST00000481644 TSPY8P0CW00 308 aa22.25■■□□□ 1.15
HSPG2-210ENST00000481644 MAPK4P31152 587 aa22.25■■□□□ 1.15
HSPG2-210ENST00000481644 HOXC10Q9NYD6 342 aa22.25■■□□□ 1.15
HSPG2-210ENST00000481644 BIN2Q9UBW5 565 aaPredicted RBP22.25■■□□□ 1.15
HSPG2-210ENST00000481644 ANAPC4Q9UJX5 808 aa22.25■■□□□ 1.15
HSPG2-210ENST00000481644 A0A0G2JMZ2 1700 aa22.25■■□□□ 1.15
HSPG2-210ENST00000481644 FLOT1O75955 427 aa22.24■■□□□ 1.15
HSPG2-210ENST00000481644 GSPT1P15170 499 aaKnown RBP22.24■■□□□ 1.15
HSPG2-210ENST00000481644 CCNA1P78396 465 aa22.24■■□□□ 1.15
HSPG2-210ENST00000481644 TFAP4Q01664 338 aa22.24■■□□□ 1.15
HSPG2-210ENST00000481644 FAM47AQ5JRC9 791 aa22.24■■□□□ 1.15
HSPG2-210ENST00000481644 NEDD1Q8NHV4 660 aa22.24■■□□□ 1.15
HSPG2-210ENST00000481644 CEP95Q96GE4 821 aa22.24■■□□□ 1.15
HSPG2-210ENST00000481644 PORCNQ9H237 461 aa22.24■■□□□ 1.15
HSPG2-210ENST00000481644 BTBD7Q9P203 1132 aa22.24■■□□□ 1.15
HSPG2-210ENST00000481644 CLIP2Q9UDT6 1046 aa22.24■■□□□ 1.15
HSPG2-210ENST00000481644 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.24■■□□□ 1.15
HSPG2-210ENST00000481644 ZMYM6O95789 1325 aa22.24■■□□□ 1.15
HSPG2-210ENST00000481644 ELNP15502 786 aa22.23■■□□□ 1.15
HSPG2-210ENST00000481644 UBXN2AP68543 259 aa22.23■■□□□ 1.15
HSPG2-210ENST00000481644 PXYLP1Q8TE99 480 aa22.23■■□□□ 1.15
HSPG2-210ENST00000481644 CWC22Q9HCG8 908 aaKnown RBP22.23■■□□□ 1.15
HSPG2-210ENST00000481644 MTMR4Q9NYA4 1195 aa22.23■■□□□ 1.15
HSPG2-210ENST00000481644 GJD2Q9UKL4 321 aa22.23■■□□□ 1.15
HSPG2-210ENST00000481644 TTLL1O95922 423 aa22.22■■□□□ 1.15
HSPG2-210ENST00000481644 DSG3P32926 999 aa22.22■■□□□ 1.15
HSPG2-210ENST00000481644 SAMD1Q6SPF0 538 aaPredicted RBP22.22■■□□□ 1.15
HSPG2-210ENST00000481644 INCENPQ9NQS7 918 aa22.22■■□□□ 1.15
HSPG2-210ENST00000481644 KIAA0100Q14667 2235 aaKnown RBP22.21■■□□□ 1.15
HSPG2-210ENST00000481644 TSPY2A6NKD2 308 aa22.21■■□□□ 1.15
HSPG2-210ENST00000481644 MTFR1Q15390 333 aa22.21■■□□□ 1.15
HSPG2-210ENST00000481644 FAM83BQ5T0W9 1011 aa22.21■■□□□ 1.15
HSPG2-210ENST00000481644 WDR78Q5VTH9 848 aa22.21■■□□□ 1.15
HSPG2-210ENST00000481644 GPR142Q7Z601 462 aa22.21■■□□□ 1.15
HSPG2-210ENST00000481644 PLEKHH3Q7Z736 793 aa22.21■■□□□ 1.15
HSPG2-210ENST00000481644 MB21D1Q8N884 522 aa22.21■■□□□ 1.15
HSPG2-210ENST00000481644 SOCS4Q8WXH5 440 aa22.21■■□□□ 1.15
HSPG2-210ENST00000481644 NUDT12Q9BQG2 462 aa22.21■■□□□ 1.15
HSPG2-210ENST00000481644 COL11A1P12107 1806 aaPredicted RBP22.2■■□□□ 1.14
HSPG2-210ENST00000481644 LAMA4Q16363 1823 aa22.2■■□□□ 1.14
HSPG2-210ENST00000481644 F5H6K3 240 aa22.2■■□□□ 1.14
HSPG2-210ENST00000481644 ORC4O43929 436 aa22.2■■□□□ 1.14
HSPG2-210ENST00000481644 RANBP6O60518 1105 aaKnown RBP22.2■■□□□ 1.14
HSPG2-210ENST00000481644 NDUFB10O96000 172 aa22.2■■□□□ 1.14
HSPG2-210ENST00000481644 INHAP05111 366 aa22.2■■□□□ 1.14
HSPG2-210ENST00000481644 HAND2P61296 217 aa22.2■■□□□ 1.14
HSPG2-210ENST00000481644 KLRC3Q07444 240 aa22.2■■□□□ 1.14
HSPG2-210ENST00000481644 MKL1Q969V6 931 aa22.2■■□□□ 1.14
HSPG2-210ENST00000481644 ATG4CQ96DT6 458 aa22.2■■□□□ 1.14
HSPG2-210ENST00000481644 TOMM22Q9NS69 142 aa22.2■■□□□ 1.14
HSPG2-210ENST00000481644 TACC3Q9Y6A5 838 aa22.2■■□□□ 1.14
HSPG2-210ENST00000481644 EN2P19622 333 aaPredicted RBP22.19■■□□□ 1.14
HSPG2-210ENST00000481644 CYP2B6P20813 491 aa22.19■■□□□ 1.14
HSPG2-210ENST00000481644 PPP4R3BQ5MIZ7 849 aa22.19■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms