RNA–Protein interactions for RNA: ENST00000481628.1

CLIP4-210, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 3

Gene CLIP4, Length 425 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-210ENST00000481628 LPAR1Q92633 364 aa11.03□□□□□ -0.64
CLIP4-210ENST00000481628 ATP8A2Q9NTI2 1148 aa11.03□□□□□ -0.64
CLIP4-210ENST00000481628 MCM9Q9NXL9 1143 aa11.03□□□□□ -0.64
CLIP4-210ENST00000481628 DDX20Q9UHI6 824 aaKnown RBP11.03□□□□□ -0.64
CLIP4-210ENST00000481628 DDX19BQ9UMR2 479 aa11.03□□□□□ -0.64
CLIP4-210ENST00000481628 IVNS1ABPQ9Y6Y0 642 aa11.03□□□□□ -0.64
CLIP4-210ENST00000481628 GOLIM4O00461 696 aa11.02□□□□□ -0.65
CLIP4-210ENST00000481628 STRNO43815 780 aa11.02□□□□□ -0.65
CLIP4-210ENST00000481628 IFIT2P09913 472 aaKnown RBP11.02□□□□□ -0.65
CLIP4-210ENST00000481628 ATP5JP18859 108 aa11.02□□□□□ -0.65
CLIP4-210ENST00000481628 COG2Q14746 738 aa11.02□□□□□ -0.65
CLIP4-210ENST00000481628 SIAH1Q8IUQ4 282 aa11.02□□□□□ -0.65
CLIP4-210ENST00000481628 ABRAQ8N0Z2 381 aa11.02□□□□□ -0.65
CLIP4-210ENST00000481628 MOV10L1Q9BXT6 1211 aaKnown RBP11.02□□□□□ -0.65
CLIP4-210ENST00000481628 SPATC1LQ9H0A9 340 aa11.02□□□□□ -0.65
CLIP4-210ENST00000481628 CWC22Q9HCG8 908 aaKnown RBP11.02□□□□□ -0.65
CLIP4-210ENST00000481628 PAG1Q9NWQ8 432 aa11.02□□□□□ -0.65
CLIP4-210ENST00000481628 HOXC10Q9NYD6 342 aa11.02□□□□□ -0.65
CLIP4-210ENST00000481628 TMX2Q9Y320 296 aa11.02□□□□□ -0.65
CLIP4-210ENST00000481628 GREB1LQ9C091 1923 aaPredicted RBP11.01□□□□□ -0.65
CLIP4-210ENST00000481628 DNM1LO00429 736 aa11.01□□□□□ -0.65
CLIP4-210ENST00000481628 CYP2D6P10635 497 aa11.01□□□□□ -0.65
CLIP4-210ENST00000481628 SYN1P17600 705 aa11.01□□□□□ -0.65
CLIP4-210ENST00000481628 DSG3P32926 999 aa11.01□□□□□ -0.65
CLIP4-210ENST00000481628 UBE3CQ15386 1083 aa11.01□□□□□ -0.65
CLIP4-210ENST00000481628 KIAA1755Q5JYT7 1200 aa11.01□□□□□ -0.65
CLIP4-210ENST00000481628 SLC44A5Q8NCS7 719 aa11.01□□□□□ -0.65
CLIP4-210ENST00000481628 TRPV1Q8NER1 839 aa11.01□□□□□ -0.65
CLIP4-210ENST00000481628 CCDC17Q96LX7 622 aa11.01□□□□□ -0.65
CLIP4-210ENST00000481628 DNAJC2Q99543 621 aaKnown RBP11.01□□□□□ -0.65
CLIP4-210ENST00000481628 HAUS7Q99871 368 aa11.01□□□□□ -0.65
CLIP4-210ENST00000481628 VCPKMTQ9H867 229 aa11.01□□□□□ -0.65
CLIP4-210ENST00000481628 MYH7P12883 1935 aa11.01□□□□□ -0.65
CLIP4-210ENST00000481628 MYH8P13535 1937 aa11.01□□□□□ -0.65
CLIP4-210ENST00000481628 ROBO3Q96MS0 1386 aa11.01□□□□□ -0.65
CLIP4-210ENST00000481628 LTBP2Q14767 1821 aa11□□□□□ -0.65
CLIP4-210ENST00000481628 WDR46O15213 610 aaKnown RBP11□□□□□ -0.65
CLIP4-210ENST00000481628 MBD4O95243 580 aa11□□□□□ -0.65
CLIP4-210ENST00000481628 AKR1B1P15121 316 aa11□□□□□ -0.65
CLIP4-210ENST00000481628 ADORA2AP29274 412 aa11□□□□□ -0.65
CLIP4-210ENST00000481628 CYP2C19P33261 490 aa11□□□□□ -0.65
CLIP4-210ENST00000481628 ATP2B2Q01814 1243 aa11□□□□□ -0.65
CLIP4-210ENST00000481628 ICA1Q05084 483 aa11□□□□□ -0.65
CLIP4-210ENST00000481628 C12orf60Q5U649 245 aa11□□□□□ -0.65
CLIP4-210ENST00000481628 WDR78Q5VTH9 848 aa11□□□□□ -0.65
CLIP4-210ENST00000481628 C16orf86Q6ZW13 317 aa11□□□□□ -0.65
CLIP4-210ENST00000481628 DDX24Q9GZR7 859 aaKnown RBP eCLIP11□□□□□ -0.65
CLIP4-210ENST00000481628 CHMP4BQ9H444 224 aaKnown RBP11□□□□□ -0.65
CLIP4-210ENST00000481628 MROH8Q9H579 483 aa11□□□□□ -0.65
CLIP4-210ENST00000481628 SH2D4AQ9H788 454 aa11□□□□□ -0.65
CLIP4-210ENST00000481628 ARMT1Q9H993 441 aa11□□□□□ -0.65
CLIP4-210ENST00000481628 ARHGEF10LQ9HCE6 1279 aa11□□□□□ -0.65
CLIP4-210ENST00000481628 ADAMTS5Q9UNA0 930 aa11□□□□□ -0.65
CLIP4-210ENST00000481628 BAZ2AQ9UIF9 1905 aaKnown RBP10.99□□□□□ -0.65
CLIP4-210ENST00000481628 MPHOSPH10O00566 681 aaKnown RBP10.99□□□□□ -0.65
CLIP4-210ENST00000481628 PRKAB2O43741 272 aa10.99□□□□□ -0.65
CLIP4-210ENST00000481628 ERCC3P19447 782 aa10.99□□□□□ -0.65
CLIP4-210ENST00000481628 SNX17Q15036 470 aa10.99□□□□□ -0.65
CLIP4-210ENST00000481628 DYNLL2Q96FJ2 89 aa10.99□□□□□ -0.65
CLIP4-210ENST00000481628 TANGO6Q9C0B7 1094 aa10.99□□□□□ -0.65
CLIP4-210ENST00000481628 UBE2OQ9C0C9 1292 aaKnown RBP10.99□□□□□ -0.65
CLIP4-210ENST00000481628 BOLA2Q9H3K6 86 aa10.99□□□□□ -0.65
CLIP4-210ENST00000481628 NRBP1Q9UHY1 535 aa10.99□□□□□ -0.65
CLIP4-210ENST00000481628 COG6Q9Y2V7 657 aa10.99□□□□□ -0.65
CLIP4-210ENST00000481628 SEPT4O43236 478 aa10.98□□□□□ -0.65
CLIP4-210ENST00000481628 COBLO75128 1261 aa10.98□□□□□ -0.65
CLIP4-210ENST00000481628 SLC25A27O95847 323 aa10.98□□□□□ -0.65
CLIP4-210ENST00000481628 CDK8P49336 464 aa10.98□□□□□ -0.65
CLIP4-210ENST00000481628 SLFNL1Q499Z3 407 aa10.98□□□□□ -0.65
CLIP4-210ENST00000481628 CLEC10AQ8IUN9 316 aa10.98□□□□□ -0.65
CLIP4-210ENST00000481628 ATG4CQ96DT6 458 aa10.98□□□□□ -0.65
CLIP4-210ENST00000481628 SLC5A4Q9NY91 659 aa10.98□□□□□ -0.65
CLIP4-210ENST00000481628 COL6A3P12111 3177 aa10.98□□□□□ -0.65
CLIP4-210ENST00000481628 USP17L12C9JPN9 530 aa10.97□□□□□ -0.65
CLIP4-210ENST00000481628 USP17L21D6R901 530 aa10.97□□□□□ -0.65
CLIP4-210ENST00000481628 SMIM22K7EJ46 135 aa10.97□□□□□ -0.65
CLIP4-210ENST00000481628 APBB1O00213 710 aa10.97□□□□□ -0.65
CLIP4-210ENST00000481628 FLOT1O75955 427 aa10.97□□□□□ -0.65
CLIP4-210ENST00000481628 CHGBP05060 677 aa10.97□□□□□ -0.65
CLIP4-210ENST00000481628 TMEM132BQ14DG7 1078 aa10.97□□□□□ -0.65
CLIP4-210ENST00000481628 C1orf53Q5VUE5 145 aa10.97□□□□□ -0.65
CLIP4-210ENST00000481628 FAM109BQ6ICB4 259 aaPredicted RBP10.97□□□□□ -0.65
CLIP4-210ENST00000481628 CTR9Q6PD62 1173 aa10.97□□□□□ -0.65
CLIP4-210ENST00000481628 DPP9Q86TI2 863 aa10.97□□□□□ -0.65
CLIP4-210ENST00000481628 AMOTL1Q8IY63 956 aa10.97□□□□□ -0.65
CLIP4-210ENST00000481628 DEFB123Q8N688 67 aa10.97□□□□□ -0.65
CLIP4-210ENST00000481628 REPS2Q8NFH8 660 aa10.97□□□□□ -0.65
CLIP4-210ENST00000481628 MAML3Q96JK9 1138 aa10.97□□□□□ -0.65
CLIP4-210ENST00000481628 SENP6Q9GZR1 1112 aaPredicted RBP10.97□□□□□ -0.65
CLIP4-210ENST00000481628 KANSL2Q9H9L4 492 aa10.97□□□□□ -0.65
CLIP4-210ENST00000481628 MTMR10Q9NXD2 777 aa10.97□□□□□ -0.65
CLIP4-210ENST00000481628 ARPP21Q9UBL0 812 aaPredicted RBP10.97□□□□□ -0.65
CLIP4-210ENST00000481628 STXBP5LQ9Y2K9 1186 aa10.97□□□□□ -0.65
CLIP4-210ENST00000481628 DIS3Q9Y2L1 958 aaKnown RBP10.97□□□□□ -0.65
CLIP4-210ENST00000481628 COL11A1P12107 1806 aaPredicted RBP10.96□□□□□ -0.65
CLIP4-210ENST00000481628 CYP2D7A0A087X1C5 515 aa10.96□□□□□ -0.65
CLIP4-210ENST00000481628 EEF2P13639 858 aaKnown RBP10.96□□□□□ -0.65
CLIP4-210ENST00000481628 CNGA1P29973 690 aa10.96□□□□□ -0.65
CLIP4-210ENST00000481628 COPB2P35606 906 aa10.96□□□□□ -0.65
CLIP4-210ENST00000481628 RTP1P59025 263 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms