RNA–Protein interactions for RNA: ENST00000481335.5

SQSTM1-207, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-207ENST00000481335 ICA1Q05084 483 aa14.57□□□□□ -0.08
SQSTM1-207ENST00000481335 MAP2K5Q13163 448 aa14.57□□□□□ -0.08
SQSTM1-207ENST00000481335 COG2Q14746 738 aa14.57□□□□□ -0.08
SQSTM1-207ENST00000481335 SBK1Q52WX2 424 aa14.57□□□□□ -0.08
SQSTM1-207ENST00000481335 POTEEQ6S8J3 1075 aa14.57□□□□□ -0.08
SQSTM1-207ENST00000481335 NECAB2Q7Z6G3 386 aa14.57□□□□□ -0.08
SQSTM1-207ENST00000481335 APPBP2Q92624 585 aa14.57□□□□□ -0.08
SQSTM1-207ENST00000481335 PUS7LQ9H0K6 701 aaKnown RBP14.57□□□□□ -0.08
SQSTM1-207ENST00000481335 BCL11AQ9H165 835 aa14.57□□□□□ -0.08
SQSTM1-207ENST00000481335 IVNS1ABPQ9Y6Y0 642 aa14.57□□□□□ -0.08
SQSTM1-207ENST00000481335 A0A1W2PRG0 241 aa14.56□□□□□ -0.08
SQSTM1-207ENST00000481335 H0YGN5 161 aa14.56□□□□□ -0.08
SQSTM1-207ENST00000481335 WDR46O15213 610 aaKnown RBP14.56□□□□□ -0.08
SQSTM1-207ENST00000481335 CYP2D6P10635 497 aa14.56□□□□□ -0.08
SQSTM1-207ENST00000481335 PRKAR2AP13861 404 aaKnown RBP14.56□□□□□ -0.08
SQSTM1-207ENST00000481335 CDK8P49336 464 aa14.56□□□□□ -0.08
SQSTM1-207ENST00000481335 SLC44A5Q8NCS7 719 aa14.56□□□□□ -0.08
SQSTM1-207ENST00000481335 SHCBP1Q8NEM2 672 aa14.56□□□□□ -0.08
SQSTM1-207ENST00000481335 VCPKMTQ9H867 229 aa14.56□□□□□ -0.08
SQSTM1-207ENST00000481335 KANSL2Q9H9L4 492 aa14.56□□□□□ -0.08
SQSTM1-207ENST00000481335 OGDHLQ9ULD0 1010 aa14.56□□□□□ -0.08
SQSTM1-207ENST00000481335 COL11A1P12107 1806 aaPredicted RBP14.55□□□□□ -0.08
SQSTM1-207ENST00000481335 MYH4Q9Y623 1939 aa14.55□□□□□ -0.08
SQSTM1-207ENST00000481335 STRNO43815 780 aa14.55□□□□□ -0.08
SQSTM1-207ENST00000481335 AKR1B1P15121 316 aa14.55□□□□□ -0.08
SQSTM1-207ENST00000481335 PTPREP23469 700 aa14.55□□□□□ -0.08
SQSTM1-207ENST00000481335 EVX2Q03828 476 aa14.55□□□□□ -0.08
SQSTM1-207ENST00000481335 GRB14Q14449 540 aa14.55□□□□□ -0.08
SQSTM1-207ENST00000481335 CTR9Q6PD62 1173 aa14.55□□□□□ -0.08
SQSTM1-207ENST00000481335 DYNLL2Q96FJ2 89 aa14.55□□□□□ -0.08
SQSTM1-207ENST00000481335 STRBPQ96SI9 672 aaKnown RBP14.55□□□□□ -0.08
SQSTM1-207ENST00000481335 TANGO6Q9C0B7 1094 aa14.55□□□□□ -0.08
SQSTM1-207ENST00000481335 ZNF287Q9HBT7 754 aa14.55□□□□□ -0.08
SQSTM1-207ENST00000481335 BTBD7Q9P203 1132 aa14.55□□□□□ -0.08
SQSTM1-207ENST00000481335 RNF113AO15541 343 aaKnown RBP14.54□□□□□ -0.08
SQSTM1-207ENST00000481335 MSCO60682 206 aa14.54□□□□□ -0.08
SQSTM1-207ENST00000481335 PEX10O60683 326 aa14.54□□□□□ -0.08
SQSTM1-207ENST00000481335 RRP1P56182 461 aaKnown RBP14.54□□□□□ -0.08
SQSTM1-207ENST00000481335 SLFNL1Q499Z3 407 aa14.54□□□□□ -0.08
SQSTM1-207ENST00000481335 ABRAQ8N0Z2 381 aa14.54□□□□□ -0.08
SQSTM1-207ENST00000481335 NBPF3Q9H094 633 aa14.54□□□□□ -0.08
SQSTM1-207ENST00000481335 SPATC1LQ9H0A9 340 aa14.54□□□□□ -0.08
SQSTM1-207ENST00000481335 GOPCQ9HD26 462 aa14.54□□□□□ -0.08
SQSTM1-207ENST00000481335 COLQQ9Y215 455 aaPredicted RBP14.54□□□□□ -0.08
SQSTM1-207ENST00000481335 ZNFX1Q9P2E3 1918 aaKnown RBP14.53□□□□□ -0.08
SQSTM1-207ENST00000481335 A0A1W2PPC1 479 aa14.53□□□□□ -0.08
SQSTM1-207ENST00000481335 EVI5O60447 810 aa14.53□□□□□ -0.08
SQSTM1-207ENST00000481335 DSG3P32926 999 aa14.53□□□□□ -0.08
SQSTM1-207ENST00000481335 CACNB2Q08289 660 aaPredicted RBP14.53□□□□□ -0.08
SQSTM1-207ENST00000481335 TRIM32Q13049 653 aa14.53□□□□□ -0.08
SQSTM1-207ENST00000481335 AAMPQ13685 434 aa14.53□□□□□ -0.08
SQSTM1-207ENST00000481335 MFSD14CQ5VZR4 134 aa14.53□□□□□ -0.08
SQSTM1-207ENST00000481335 PAWRQ96IZ0 340 aaKnown RBP14.53□□□□□ -0.08
SQSTM1-207ENST00000481335 MROH8Q9H579 483 aa14.53□□□□□ -0.08
SQSTM1-207ENST00000481335 SLC5A4Q9NY91 659 aa14.53□□□□□ -0.08
SQSTM1-207ENST00000481335 SYNPO2Q9UMS6 1093 aa14.53□□□□□ -0.08
SQSTM1-207ENST00000481335 GSG1L2A8MUP6 293 aa14.52□□□□□ -0.09
SQSTM1-207ENST00000481335 GPAA1O43292 621 aa14.52□□□□□ -0.09
SQSTM1-207ENST00000481335 FLOT1O75955 427 aa14.52□□□□□ -0.09
SQSTM1-207ENST00000481335 CHGBP05060 677 aa14.52□□□□□ -0.09
SQSTM1-207ENST00000481335 COPB2P35606 906 aa14.52□□□□□ -0.09
SQSTM1-207ENST00000481335 FXR1P51114 621 aaKnown RBP eCLIP14.52□□□□□ -0.094e-6■□□□□ 9.8
SQSTM1-207ENST00000481335 WDR78Q5VTH9 848 aa14.52□□□□□ -0.09
SQSTM1-207ENST00000481335 TICAM2Q86XR7 235 aa14.52□□□□□ -0.09
SQSTM1-207ENST00000481335 SIAH1Q8IUQ4 282 aa14.52□□□□□ -0.09
SQSTM1-207ENST00000481335 OSBP2Q969R2 916 aa14.52□□□□□ -0.09
SQSTM1-207ENST00000481335 MOV10L1Q9BXT6 1211 aaKnown RBP14.52□□□□□ -0.09
SQSTM1-207ENST00000481335 PCDHB15Q9Y5E8 787 aa14.52□□□□□ -0.09
SQSTM1-207ENST00000481335 PLXNA1Q9UIW2 1896 aa14.51□□□□□ -0.09
SQSTM1-207ENST00000481335 CYP2D7A0A087X1C5 515 aa14.51□□□□□ -0.09
SQSTM1-207ENST00000481335 SLC25A27O95847 323 aa14.51□□□□□ -0.09
SQSTM1-207ENST00000481335 EEF2P13639 858 aaKnown RBP14.51□□□□□ -0.09
SQSTM1-207ENST00000481335 CCL14Q16627 93 aa14.51□□□□□ -0.09
SQSTM1-207ENST00000481335 OLFML2BQ68BL8 750 aa14.51□□□□□ -0.09
SQSTM1-207ENST00000481335 CHRDL2Q6WN34 429 aa14.51□□□□□ -0.09
SQSTM1-207ENST00000481335 PI4K2BQ8TCG2 481 aa14.51□□□□□ -0.09
SQSTM1-207ENST00000481335 NACAP1Q9BZK3 213 aa14.51□□□□□ -0.09
SQSTM1-207ENST00000481335 PRO3102Q9H379 93 aa14.51□□□□□ -0.09
SQSTM1-207ENST00000481335 C11orf49Q9H6J7 331 aa14.51□□□□□ -0.09
SQSTM1-207ENST00000481335 ZBTB47Q9UFB7 747 aaPredicted RBP14.51□□□□□ -0.09
SQSTM1-207ENST00000481335 ADAMTS5Q9UNA0 930 aa14.51□□□□□ -0.09
SQSTM1-207ENST00000481335 PLIN4Q96Q06 1357 aa14.5□□□□□ -0.09
SQSTM1-207ENST00000481335 IGHA2P01877 340 aa14.5□□□□□ -0.09
SQSTM1-207ENST00000481335 MX1P20591 662 aa14.5□□□□□ -0.09
SQSTM1-207ENST00000481335 RASA1P20936 1047 aa14.5□□□□□ -0.09
SQSTM1-207ENST00000481335 TDO2P48775 406 aa14.5□□□□□ -0.09
SQSTM1-207ENST00000481335 MNX1P50219 401 aaPredicted RBP14.5□□□□□ -0.09
SQSTM1-207ENST00000481335 ATP2B2Q01814 1243 aa14.5□□□□□ -0.09
SQSTM1-207ENST00000481335 DIS3LQ8TF46 1054 aaKnown RBP14.5□□□□□ -0.09
SQSTM1-207ENST00000481335 MKNK2Q9HBH9 465 aa14.5□□□□□ -0.09
SQSTM1-207ENST00000481335 NYAP2Q9P242 653 aa14.5□□□□□ -0.09
SQSTM1-207ENST00000481335 SALL3Q9BXA9 1300 aa14.49□□□□□ -0.09
SQSTM1-207ENST00000481335 PATL2C9JE40 543 aaKnown RBP14.49□□□□□ -0.09
SQSTM1-207ENST00000481335 COL6A1P12109 1028 aa14.49□□□□□ -0.09
SQSTM1-207ENST00000481335 ERCC3P19447 782 aa14.49□□□□□ -0.09
SQSTM1-207ENST00000481335 ADORA2AP29274 412 aa14.49□□□□□ -0.09
SQSTM1-207ENST00000481335 CCND3P30281 292 aaPredicted RBP14.49□□□□□ -0.09
SQSTM1-207ENST00000481335 HDAC1Q13547 482 aaPredicted RBP14.49□□□□□ -0.09
SQSTM1-207ENST00000481335 KIAA1755Q5JYT7 1200 aa14.49□□□□□ -0.09
SQSTM1-207ENST00000481335 TSHZ3Q63HK5 1081 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms