RNA–Protein interactions for RNA: ENST00000481231.5

SMARCE1-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 695 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-210ENST00000481231 ASNSP08243 561 aa11.56□□□□□ -0.56
SMARCE1-210ENST00000481231 UQCRFS1P1P0C7P4 283 aa11.56□□□□□ -0.56
SMARCE1-210ENST00000481231 ATF7IPQ6VMQ6 1270 aa11.56□□□□□ -0.56
SMARCE1-210ENST00000481231 C16orf59Q7L2K0 433 aa11.56□□□□□ -0.56
SMARCE1-210ENST00000481231 CLUAP1Q96AJ1 413 aa11.56□□□□□ -0.56
SMARCE1-210ENST00000481231 NKX2-4Q9H2Z4 354 aa11.56□□□□□ -0.56
SMARCE1-210ENST00000481231 SNRKQ9NRH2 765 aa11.56□□□□□ -0.56
SMARCE1-210ENST00000481231 HERC5Q9UII4 1024 aaKnown RBP11.56□□□□□ -0.56
SMARCE1-210ENST00000481231 PHF24Q9UPV7 400 aa11.56□□□□□ -0.56
SMARCE1-210ENST00000481231 CCER2I3L3R5 266 aa11.55□□□□□ -0.56
SMARCE1-210ENST00000481231 ADORA2AP29274 412 aa11.55□□□□□ -0.56
SMARCE1-210ENST00000481231 MRE11P49959 708 aa11.55□□□□□ -0.56
SMARCE1-210ENST00000481231 FAAP100Q0VG06 881 aa11.55□□□□□ -0.56
SMARCE1-210ENST00000481231 SKIV2LQ15477 1246 aaKnown RBP11.55□□□□□ -0.56
SMARCE1-210ENST00000481231 TMEM240Q5SV17 173 aa11.55□□□□□ -0.56
SMARCE1-210ENST00000481231 OLFML2BQ68BL8 750 aa11.55□□□□□ -0.56
SMARCE1-210ENST00000481231 DPP9Q86TI2 863 aa11.55□□□□□ -0.56
SMARCE1-210ENST00000481231 FRAT1Q92837 279 aaPredicted RBP11.55□□□□□ -0.56
SMARCE1-210ENST00000481231 TSPYL2Q9H2G4 693 aaPredicted RBP11.55□□□□□ -0.56
SMARCE1-210ENST00000481231 AATFQ9NY61 560 aaKnown RBP eCLIP11.55□□□□□ -0.56
SMARCE1-210ENST00000481231 ZBTB21Q9ULJ3 1066 aa11.55□□□□□ -0.56
SMARCE1-210ENST00000481231 SIPA1L1O43166 1804 aa11.55□□□□□ -0.56
SMARCE1-210ENST00000481231 A0A1W2PQ45 241 aaPredicted RBP11.54□□□□□ -0.56
SMARCE1-210ENST00000481231 A0A1W2PQY0 241 aa11.54□□□□□ -0.56
SMARCE1-210ENST00000481231 ACRP10323 421 aa11.54□□□□□ -0.56
SMARCE1-210ENST00000481231 POLA2Q14181 598 aa11.54□□□□□ -0.56
SMARCE1-210ENST00000481231 TNNI3KQ59H18 835 aa11.54□□□□□ -0.56
SMARCE1-210ENST00000481231 RASIP1Q5U651 963 aa11.54□□□□□ -0.56
SMARCE1-210ENST00000481231 NAA16Q6N069 864 aaPredicted RBP11.54□□□□□ -0.56
SMARCE1-210ENST00000481231 ADGRA1Q86SQ6 560 aa11.54□□□□□ -0.56
SMARCE1-210ENST00000481231 MAPKAPK5Q8IW41 473 aa11.54□□□□□ -0.56
SMARCE1-210ENST00000481231 TMEM57Q8N5G2 664 aa11.54□□□□□ -0.56
SMARCE1-210ENST00000481231 SLC44A5Q8NCS7 719 aa11.54□□□□□ -0.56
SMARCE1-210ENST00000481231 LENG1Q96BZ8 264 aaPredicted RBP11.54□□□□□ -0.56
SMARCE1-210ENST00000481231 DBNDD2Q9BQY9 259 aa11.54□□□□□ -0.56
SMARCE1-210ENST00000481231 NOL10Q9BSC4 688 aaKnown RBP11.54□□□□□ -0.56
SMARCE1-210ENST00000481231 PI4KBQ9UBF8 816 aa11.54□□□□□ -0.56
SMARCE1-210ENST00000481231 YBX2Q9Y2T7 364 aaKnown RBP11.54□□□□□ -0.56
SMARCE1-210ENST00000481231 FPGT-TNNI3KV9GXZ4 949 aa11.54□□□□□ -0.56
SMARCE1-210ENST00000481231 PLXNA1Q9UIW2 1896 aa11.54□□□□□ -0.56
SMARCE1-210ENST00000481231 FLT1P17948 1338 aa11.54□□□□□ -0.56
SMARCE1-210ENST00000481231 USP17L15C9J2P7 530 aa11.53□□□□□ -0.56
SMARCE1-210ENST00000481231 USP17L13C9JLJ4 530 aa11.53□□□□□ -0.56
SMARCE1-210ENST00000481231 USP17L11C9JVI0 530 aa11.53□□□□□ -0.56
SMARCE1-210ENST00000481231 USP17L18D6R9N7 530 aa11.53□□□□□ -0.56
SMARCE1-210ENST00000481231 USP17L22D6RA61 530 aa11.53□□□□□ -0.56
SMARCE1-210ENST00000481231 USP17L17D6RBQ6 530 aa11.53□□□□□ -0.56
SMARCE1-210ENST00000481231 USP17L19D6RCP7 530 aa11.53□□□□□ -0.56
SMARCE1-210ENST00000481231 USP17L20D6RJB6 530 aa11.53□□□□□ -0.56
SMARCE1-210ENST00000481231 COBLO75128 1261 aa11.53□□□□□ -0.56
SMARCE1-210ENST00000481231 BAG3O95817 575 aa11.53□□□□□ -0.56
SMARCE1-210ENST00000481231 PGK1P00558 417 aa11.53□□□□□ -0.56
SMARCE1-210ENST00000481231 CYP2E1P05181 493 aaPredicted RBP11.53□□□□□ -0.56
SMARCE1-210ENST00000481231 CSF2RAP15509 400 aa11.53□□□□□ -0.56
SMARCE1-210ENST00000481231 PLCG2P16885 1265 aa11.53□□□□□ -0.56
SMARCE1-210ENST00000481231 PPP4CP60510 307 aa11.53□□□□□ -0.56
SMARCE1-210ENST00000481231 USP17L24Q0WX57 530 aa11.53□□□□□ -0.56
SMARCE1-210ENST00000481231 OS9Q13438 667 aaPredicted RBP11.53□□□□□ -0.56
SMARCE1-210ENST00000481231 AAK1Q2M2I8 961 aa11.53□□□□□ -0.56
SMARCE1-210ENST00000481231 TTC39AQ5SRH9 613 aa11.53□□□□□ -0.56
SMARCE1-210ENST00000481231 USP17L2Q6R6M4 530 aa11.53□□□□□ -0.56
SMARCE1-210ENST00000481231 METTL16Q86W50 562 aaKnown RBP11.53□□□□□ -0.56
SMARCE1-210ENST00000481231 TGFBRAP1Q8WUH2 860 aa11.53□□□□□ -0.56
SMARCE1-210ENST00000481231 FEZ1Q99689 392 aa11.53□□□□□ -0.56
SMARCE1-210ENST00000481231 DHX36Q9H2U1 1008 aaKnown RBP11.53□□□□□ -0.56
SMARCE1-210ENST00000481231 GPR108Q9NPR9 543 aa11.53□□□□□ -0.56
SMARCE1-210ENST00000481231 XPNPEP3Q9NQH7 507 aa11.53□□□□□ -0.56
SMARCE1-210ENST00000481231 MSRAQ9UJ68 235 aa11.53□□□□□ -0.56
SMARCE1-210ENST00000481231 SPDYE16A6NNV3 312 aaPredicted RBP11.52□□□□□ -0.57
SMARCE1-210ENST00000481231 GPR37L1O60883 481 aa11.52□□□□□ -0.57
SMARCE1-210ENST00000481231 TIMP1P01033 207 aa11.52□□□□□ -0.57
SMARCE1-210ENST00000481231 VCAM1P19320 739 aa11.52□□□□□ -0.57
SMARCE1-210ENST00000481231 RAB30Q15771 203 aa11.52□□□□□ -0.57
SMARCE1-210ENST00000481231 CCDC158Q5M9N0 1113 aa11.52□□□□□ -0.57
SMARCE1-210ENST00000481231 ZNF365Q70YC5 407 aa11.52□□□□□ -0.57
SMARCE1-210ENST00000481231 CRACR2BQ8N4Y2 399 aaPredicted RBP11.52□□□□□ -0.57
SMARCE1-210ENST00000481231 SSH3Q8TE77 659 aa11.52□□□□□ -0.57
SMARCE1-210ENST00000481231 SLC28A3Q9HAS3 691 aa11.52□□□□□ -0.57
SMARCE1-210ENST00000481231 PIH1D3Q9NQM4 214 aaKnown RBP11.52□□□□□ -0.57
SMARCE1-210ENST00000481231 TBX21Q9UL17 535 aa11.52□□□□□ -0.57
SMARCE1-210ENST00000481231 PALD1Q9ULE6 856 aa11.52□□□□□ -0.57
SMARCE1-210ENST00000481231 DCDC2CA8MYV0 355 aa11.51□□□□□ -0.57
SMARCE1-210ENST00000481231 APBB1O00213 710 aa11.51□□□□□ -0.57
SMARCE1-210ENST00000481231 ERC2O15083 957 aa11.51□□□□□ -0.57
SMARCE1-210ENST00000481231 GH2P01242 217 aa11.51□□□□□ -0.57
SMARCE1-210ENST00000481231 RARBP10826 455 aa11.51□□□□□ -0.57
SMARCE1-210ENST00000481231 ZAP70P43403 619 aa11.51□□□□□ -0.57
SMARCE1-210ENST00000481231 PPIGQ13427 754 aaKnown RBP eCLIP11.51□□□□□ -0.57
SMARCE1-210ENST00000481231 ZKSCAN2Q63HK3 967 aa11.51□□□□□ -0.57
SMARCE1-210ENST00000481231 MFSD5Q6N075 450 aa11.51□□□□□ -0.57
SMARCE1-210ENST00000481231 CATSPERGQ6ZRH7 1159 aa11.51□□□□□ -0.57
SMARCE1-210ENST00000481231 ANKRD33Q7Z3H0 272 aa11.51□□□□□ -0.57
SMARCE1-210ENST00000481231 FOXP4Q8IVH2 680 aaPredicted RBP11.51□□□□□ -0.57
SMARCE1-210ENST00000481231 ZNF512BQ96KM6 892 aaPredicted RBP11.51□□□□□ -0.57
SMARCE1-210ENST00000481231 C12orf42Q96LP6 360 aa11.51□□□□□ -0.57
SMARCE1-210ENST00000481231 MOV10L1Q9BXT6 1211 aaKnown RBP11.51□□□□□ -0.57
SMARCE1-210ENST00000481231 TRIM34Q9BYJ4 488 aa11.51□□□□□ -0.57
SMARCE1-210ENST00000481231 C1orf115Q9H7X2 142 aa11.51□□□□□ -0.57
SMARCE1-210ENST00000481231 SAP30BPQ9UHR5 308 aaKnown RBP11.51□□□□□ -0.57
SMARCE1-210ENST00000481231 DBNLQ9UJU6 430 aaKnown RBP11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 164 ms