RNA–Protein interactions for RNA: ENST00000481135.1

CUL3-209, Transcript of cullin 3, humanhuman

TSL 3

Gene CUL3, Length 754 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-209ENST00000481135 ST13P5Q8NFI4 369 aaPredicted RBP13.05□□□□□ -0.32
CUL3-209ENST00000481135 KLHL6Q8WZ60 621 aa13.05□□□□□ -0.32
CUL3-209ENST00000481135 LEFTY1O75610 366 aa13.04□□□□□ -0.32
CUL3-209ENST00000481135 TP53P04637 393 aaPredicted RBP13.04□□□□□ -0.32
CUL3-209ENST00000481135 SFRP5Q5T4F7 317 aa13.04□□□□□ -0.32
CUL3-209ENST00000481135 TDRD10Q5VZ19 366 aaKnown RBP13.04□□□□□ -0.32
CUL3-209ENST00000481135 FBXL6Q8N531 539 aa13.04□□□□□ -0.32
CUL3-209ENST00000481135 EPN3Q9H201 632 aa13.04□□□□□ -0.32
CUL3-209ENST00000481135 H2AFB1P0C5Y9 115 aa13.03□□□□□ -0.32
CUL3-209ENST00000481135 H2AFB2P0C5Z0 115 aa13.03□□□□□ -0.32
CUL3-209ENST00000481135 TCEAL1Q15170 157 aa13.03□□□□□ -0.32
CUL3-209ENST00000481135 MTERF2Q49AM1 385 aa13.03□□□□□ -0.32
CUL3-209ENST00000481135 HEATR6Q6AI08 1181 aaKnown RBP13.03□□□□□ -0.32
CUL3-209ENST00000481135 PPFIBP1Q86W92 1011 aa13.03□□□□□ -0.32
CUL3-209ENST00000481135 GATA6Q92908 595 aa13.03□□□□□ -0.32
CUL3-209ENST00000481135 ZNF512BQ96KM6 892 aaPredicted RBP13.03□□□□□ -0.32
CUL3-209ENST00000481135 MFSD14AQ96MC6 490 aa13.03□□□□□ -0.32
CUL3-209ENST00000481135 DBNDD2Q9BQY9 259 aa13.03□□□□□ -0.32
CUL3-209ENST00000481135 METTL22Q9BUU2 404 aaPredicted RBP13.03□□□□□ -0.32
CUL3-209ENST00000481135 FAM86C1Q9NVL1 165 aa13.03□□□□□ -0.32
CUL3-209ENST00000481135 KCNH3Q9ULD8 1083 aa13.03□□□□□ -0.32
CUL3-209ENST00000481135 FAM221BA6H8Z2 402 aa13.02□□□□□ -0.33
CUL3-209ENST00000481135 C9IYK1 514 aa13.02□□□□□ -0.33
CUL3-209ENST00000481135 ADMP35318 185 aa13.02□□□□□ -0.33
CUL3-209ENST00000481135 KIR3DL1P43629 444 aa13.02□□□□□ -0.33
CUL3-209ENST00000481135 NFIAQ12857 509 aa13.02□□□□□ -0.33
CUL3-209ENST00000481135 ANKRD39Q53RE8 183 aa13.02□□□□□ -0.33
CUL3-209ENST00000481135 GIMAP6Q6P9H5 292 aa13.02□□□□□ -0.33
CUL3-209ENST00000481135 ZNF669Q96BR6 464 aaPredicted RBP13.02□□□□□ -0.33
CUL3-209ENST00000481135 ATG3Q9NT62 314 aa13.02□□□□□ -0.33
CUL3-209ENST00000481135 ANKRD34BA5PLL1 514 aa13.01□□□□□ -0.33
CUL3-209ENST00000481135 VWCEQ96DN2 955 aa13.01□□□□□ -0.33
CUL3-209ENST00000481135 APBA2Q99767 749 aa13.01□□□□□ -0.33
CUL3-209ENST00000481135 HAUS7Q99871 368 aa13.01□□□□□ -0.33
CUL3-209ENST00000481135 GBP3Q9H0R5 595 aa13.01□□□□□ -0.33
CUL3-209ENST00000481135 TLDC2A0PJX2 215 aa13□□□□□ -0.33
CUL3-209ENST00000481135 AGRPO00253 132 aa13□□□□□ -0.33
CUL3-209ENST00000481135 IGF2BP3O00425 579 aaKnown RBP eCLIP13□□□□□ -0.33
CUL3-209ENST00000481135 SUSD5O60279 629 aa13□□□□□ -0.33
CUL3-209ENST00000481135 AUHQ13825 339 aaKnown RBP13□□□□□ -0.33
CUL3-209ENST00000481135 AXDND1Q5T1B0 1012 aaPredicted RBP13□□□□□ -0.33
CUL3-209ENST00000481135 MRM1Q6IN84 353 aaKnown RBP13□□□□□ -0.33
CUL3-209ENST00000481135 SLC51AQ86UW1 340 aa13□□□□□ -0.33
CUL3-209ENST00000481135 COL17A1Q9UMD9 1497 aaPredicted RBP12.99□□□□□ -0.33
CUL3-209ENST00000481135 ITGB2P05107 769 aa12.99□□□□□ -0.33
CUL3-209ENST00000481135 DOC2BQ14184 412 aa12.99□□□□□ -0.33
CUL3-209ENST00000481135 CPSF6Q16630 551 aaKnown RBP eCLIP12.99□□□□□ -0.33
CUL3-209ENST00000481135 ARHGAP27Q6ZUM4 889 aa12.99□□□□□ -0.33
CUL3-209ENST00000481135 C7orf61Q8IZ16 206 aa12.99□□□□□ -0.33
CUL3-209ENST00000481135 OSBPL1AQ9BXW6 950 aa12.99□□□□□ -0.33
CUL3-209ENST00000481135 FBXL21Q9UKT6 434 aa12.99□□□□□ -0.33
CUL3-209ENST00000481135 PCDHB12Q9Y5F1 795 aa12.99□□□□□ -0.33
CUL3-209ENST00000481135 IQCA1LA6NCM1 817 aa12.98□□□□□ -0.33
CUL3-209ENST00000481135 FAM170BA6NMN3 283 aa12.98□□□□□ -0.33
CUL3-209ENST00000481135 GNAT3A8MTJ3 354 aa12.98□□□□□ -0.33
CUL3-209ENST00000481135 SMARCA5O60264 1052 aaPredicted RBP12.98□□□□□ -0.33
CUL3-209ENST00000481135 IGLV1-40P01703 118 aa12.98□□□□□ -0.33
CUL3-209ENST00000481135 C22orf34Q6ZV56 151 aa12.98□□□□□ -0.33
CUL3-209ENST00000481135 ZNF765Q7L2R6 523 aa12.98□□□□□ -0.33
CUL3-209ENST00000481135 DNAJC7Q99615 494 aa12.98□□□□□ -0.33
CUL3-209ENST00000481135 ASCC2Q9H1I8 757 aaPredicted RBP12.98□□□□□ -0.33
CUL3-209ENST00000481135 MSTNO14793 375 aa12.97□□□□□ -0.33
CUL3-209ENST00000481135 CBX7O95931 251 aa12.97□□□□□ -0.33
CUL3-209ENST00000481135 F13BP05160 661 aa12.97□□□□□ -0.33
CUL3-209ENST00000481135 NBPF9Q3BBW0 867 aa12.97□□□□□ -0.33
CUL3-209ENST00000481135 ADAT2Q7Z6V5 191 aaKnown RBP12.97□□□□□ -0.33
CUL3-209ENST00000481135 PPM1BO75688 479 aa12.96□□□□□ -0.33
CUL3-209ENST00000481135 EPHX1P07099 455 aa12.96□□□□□ -0.33
CUL3-209ENST00000481135 FSTP19883 344 aa12.96□□□□□ -0.33
CUL3-209ENST00000481135 DCAF15Q66K64 600 aa12.96□□□□□ -0.33
CUL3-209ENST00000481135 FAM214BQ7L5A3 538 aa12.96□□□□□ -0.33
CUL3-209ENST00000481135 WHRNQ9P202 907 aa12.96□□□□□ -0.33
CUL3-209ENST00000481135 WDR64B1ANS9 1081 aa12.95□□□□□ -0.34
CUL3-209ENST00000481135 ITGA4P13612 1032 aa12.95□□□□□ -0.34
CUL3-209ENST00000481135 CD247P20963 164 aa12.95□□□□□ -0.34
CUL3-209ENST00000481135 SV2CQ496J9 727 aa12.95□□□□□ -0.34
CUL3-209ENST00000481135 NOL9Q5SY16 702 aaKnown RBP12.95□□□□□ -0.34
CUL3-209ENST00000481135 KLHL25Q9H0H3 589 aa12.95□□□□□ -0.34
CUL3-209ENST00000481135 CWC22Q9HCG8 908 aaKnown RBP12.95□□□□□ -0.34
CUL3-209ENST00000481135 PRR13Q9NZ81 148 aa12.95□□□□□ -0.34
CUL3-209ENST00000481135 ZNF865P0CJ78 1059 aaPredicted RBP12.94□□□□□ -0.34
CUL3-209ENST00000481135 SSRP1Q08945 709 aaKnown RBP12.94□□□□□ -0.34
CUL3-209ENST00000481135 LRRC47Q8N1G4 583 aaKnown RBP12.94□□□□□ -0.34
CUL3-209ENST00000481135 MFSD4AQ8N468 514 aa12.94□□□□□ -0.34
CUL3-209ENST00000481135 SHKBP1Q8TBC3 707 aa12.94□□□□□ -0.34
CUL3-209ENST00000481135 PIWIL2Q8TC59 973 aaKnown RBP12.94□□□□□ -0.34
CUL3-209ENST00000481135 HEXIM2Q96MH2 286 aaKnown RBP12.94□□□□□ -0.34
CUL3-209ENST00000481135 SPOCK3Q9BQ16 436 aa12.94□□□□□ -0.34
CUL3-209ENST00000481135 LRP2BPQ9P2M1 347 aa12.94□□□□□ -0.34
CUL3-209ENST00000481135 CBFA2T2O43439 604 aa12.93□□□□□ -0.34
CUL3-209ENST00000481135 CANXP27824 592 aaKnown RBP12.93□□□□□ -0.34
CUL3-209ENST00000481135 SLC10A6Q3KNW5 377 aa12.93□□□□□ -0.34
CUL3-209ENST00000481135 DTWD2Q8NBA8 298 aa12.93□□□□□ -0.34
CUL3-209ENST00000481135 MKNK2Q9HBH9 465 aa12.93□□□□□ -0.34
CUL3-209ENST00000481135 GP6Q9HCN6 339 aa12.93□□□□□ -0.34
CUL3-209ENST00000481135 ZMYM5Q9UJ78 669 aa12.93□□□□□ -0.34
CUL3-209ENST00000481135 SUGT1Q9Y2Z0 365 aa12.93□□□□□ -0.34
CUL3-209ENST00000481135 TBX22Q9Y458 520 aa12.93□□□□□ -0.34
CUL3-209ENST00000481135 ZNF451Q9Y4E5 1061 aa12.93□□□□□ -0.34
CUL3-209ENST00000481135 KDM2BQ8NHM5 1336 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms