RNA–Protein interactions for RNA: ENST00000481048.5

LRCH3-216, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 536 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-216ENST00000481048 PSAPP07602 524 aa8.5□□□□□ -1.05
LRCH3-216ENST00000481048 ALDH1B1P30837 517 aa8.5□□□□□ -1.05
LRCH3-216ENST00000481048 GDF6Q6KF10 455 aaPredicted RBP8.5□□□□□ -1.05
LRCH3-216ENST00000481048 PRPF40BQ6NWY9 871 aaKnown RBP8.5□□□□□ -1.05
LRCH3-216ENST00000481048 TREML1Q86YW5 311 aa8.5□□□□□ -1.05
LRCH3-216ENST00000481048 RTKN2Q8IZC4 609 aa8.5□□□□□ -1.05
LRCH3-216ENST00000481048 PLD4Q96BZ4 506 aa8.5□□□□□ -1.05
LRCH3-216ENST00000481048 PLEKHF1Q96S99 279 aa8.5□□□□□ -1.05
LRCH3-216ENST00000481048 NYXQ9GZU5 481 aa8.5□□□□□ -1.05
LRCH3-216ENST00000481048 NIP7Q9Y221 180 aaKnown RBP eCLIP8.5□□□□□ -1.05
LRCH3-216ENST00000481048 LAMB4A4D0S4 1761 aa8.5□□□□□ -1.05
LRCH3-216ENST00000481048 KDM3BQ7LBC6 1761 aa8.5□□□□□ -1.05
LRCH3-216ENST00000481048 PRAMEF22A3QJZ6 481 aa8.49□□□□□ -1.05
LRCH3-216ENST00000481048 A6NJR5 290 aa8.49□□□□□ -1.05
LRCH3-216ENST00000481048 DCTN1Q14203 1278 aa8.49□□□□□ -1.05
LRCH3-216ENST00000481048 CCDC93Q567U6 631 aa8.49□□□□□ -1.05
LRCH3-216ENST00000481048 PRR23CQ6ZRP0 262 aa8.49□□□□□ -1.05
LRCH3-216ENST00000481048 NSUN5Q96P11 429 aaKnown RBP8.49□□□□□ -1.05
LRCH3-216ENST00000481048 AKTIPQ9H8T0 292 aa8.49□□□□□ -1.05
LRCH3-216ENST00000481048 RNF112Q9ULX5 631 aa8.49□□□□□ -1.05
LRCH3-216ENST00000481048 IQCA1LA6NCM1 817 aa8.48□□□□□ -1.05
LRCH3-216ENST00000481048 MMP20O60882 483 aa8.48□□□□□ -1.05
LRCH3-216ENST00000481048 ALX3O95076 343 aa8.48□□□□□ -1.05
LRCH3-216ENST00000481048 GHRHP01286 108 aa8.48□□□□□ -1.05
LRCH3-216ENST00000481048 PIP4K2AP48426 406 aaPredicted RBP8.48□□□□□ -1.05
LRCH3-216ENST00000481048 EIF4A1P60842 406 aaKnown RBP8.48□□□□□ -1.05
LRCH3-216ENST00000481048 FKBP4Q02790 459 aaKnown RBP eCLIP8.48□□□□□ -1.05
LRCH3-216ENST00000481048 NFE2L2Q16236 605 aa8.48□□□□□ -1.05
LRCH3-216ENST00000481048 IL22RA1Q8N6P7 574 aa8.48□□□□□ -1.05
LRCH3-216ENST00000481048 BABAM1Q9NWV8 329 aa8.48□□□□□ -1.05
LRCH3-216ENST00000481048 MAP3K15Q6ZN16 1313 aa8.48□□□□□ -1.05
LRCH3-216ENST00000481048 PCNTO95613 3336 aa8.47□□□□□ -1.05
LRCH3-216ENST00000481048 RFX1P22670 979 aa8.47□□□□□ -1.05
LRCH3-216ENST00000481048 HLFQ16534 295 aa8.47□□□□□ -1.05
LRCH3-216ENST00000481048 CRY2Q49AN0 593 aa8.47□□□□□ -1.05
LRCH3-216ENST00000481048 COX20Q5RI15 118 aa8.47□□□□□ -1.05
LRCH3-216ENST00000481048 MRPL18Q9H0U6 180 aaKnown RBP8.47□□□□□ -1.05
LRCH3-216ENST00000481048 KCNMB2Q9Y691 235 aa8.47□□□□□ -1.05
LRCH3-216ENST00000481048 IBTKQ9P2D0 1353 aaPredicted RBP8.47□□□□□ -1.05
LRCH3-216ENST00000481048 DDNO94850 711 aaPredicted RBP8.46□□□□□ -1.06
LRCH3-216ENST00000481048 HTRA3P83110 453 aa8.46□□□□□ -1.06
LRCH3-216ENST00000481048 FKBP5Q13451 457 aaPredicted RBP8.46□□□□□ -1.06
LRCH3-216ENST00000481048 RALBP1Q15311 655 aa8.46□□□□□ -1.06
LRCH3-216ENST00000481048 KIF6Q6ZMV9 814 aa8.46□□□□□ -1.06
LRCH3-216ENST00000481048 DZIP1LQ8IYY4 767 aaKnown RBP8.46□□□□□ -1.06
LRCH3-216ENST00000481048 PRIMPOLQ96LW4 560 aa8.46□□□□□ -1.06
LRCH3-216ENST00000481048 PSMD1Q99460 953 aa8.46□□□□□ -1.06
LRCH3-216ENST00000481048 RBSNQ9H1K0 784 aa8.46□□□□□ -1.06
LRCH3-216ENST00000481048 MIS18AQ9NYP9 233 aa8.46□□□□□ -1.06
LRCH3-216ENST00000481048 MAPK8IP3Q9UPT6 1336 aa8.46□□□□□ -1.06
LRCH3-216ENST00000481048 RIC1Q4ADV7 1423 aa8.46□□□□□ -1.06
LRCH3-216ENST00000481048 FZD9O00144 591 aa8.45□□□□□ -1.06
LRCH3-216ENST00000481048 HOXA10P31260 410 aaPredicted RBP8.45□□□□□ -1.06
LRCH3-216ENST00000481048 LMOD3Q0VAK6 560 aa8.45□□□□□ -1.06
LRCH3-216ENST00000481048 PARP10Q53GL7 1025 aa8.45□□□□□ -1.06
LRCH3-216ENST00000481048 PPP1R42Q7Z4L9 355 aa8.45□□□□□ -1.06
LRCH3-216ENST00000481048 PNMA8AQ86V59 439 aaPredicted RBP8.45□□□□□ -1.06
LRCH3-216ENST00000481048 LDHDQ86WU2 507 aa8.45□□□□□ -1.06
LRCH3-216ENST00000481048 TMEM130Q8N3G9 435 aa8.45□□□□□ -1.06
LRCH3-216ENST00000481048 CRAMP1Q96RY5 1269 aa8.45□□□□□ -1.06
LRCH3-216ENST00000481048 VPS33BQ9H267 617 aa8.45□□□□□ -1.06
LRCH3-216ENST00000481048 NOVA2Q9UNW9 492 aaKnown RBP8.45□□□□□ -1.06
LRCH3-216ENST00000481048 RRP7AQ9Y3A4 280 aaKnown RBP8.45□□□□□ -1.06
LRCH3-216ENST00000481048 F8W735 103 aaPredicted RBP8.44□□□□□ -1.06
LRCH3-216ENST00000481048 IARSP41252 1262 aaKnown RBP8.44□□□□□ -1.06
LRCH3-216ENST00000481048 TMEM132AQ24JP5 1023 aa8.44□□□□□ -1.06
LRCH3-216ENST00000481048 ZNF34Q8IZ26 560 aa8.44□□□□□ -1.06
LRCH3-216ENST00000481048 SYNE4Q8N205 404 aa8.44□□□□□ -1.06
LRCH3-216ENST00000481048 NGEFQ8N5V2 710 aa8.44□□□□□ -1.06
LRCH3-216ENST00000481048 JDP2Q8WYK2 163 aa8.44□□□□□ -1.06
LRCH3-216ENST00000481048 RBM17Q96I25 401 aaKnown RBP8.44□□□□□ -1.06
LRCH3-216ENST00000481048 TAF1DQ9H5J8 278 aaPredicted RBP8.44□□□□□ -1.06
LRCH3-216ENST00000481048 TSPYL4Q9UJ04 414 aa8.44□□□□□ -1.06
LRCH3-216ENST00000481048 RNF123Q5XPI4 1314 aa8.44□□□□□ -1.06
LRCH3-216ENST00000481048 FAM177BA6PVY3 158 aa8.43□□□□□ -1.06
LRCH3-216ENST00000481048 MYL6BP14649 208 aa8.43□□□□□ -1.06
LRCH3-216ENST00000481048 FSTP19883 344 aa8.43□□□□□ -1.06
LRCH3-216ENST00000481048 SOX18P35713 384 aa8.43□□□□□ -1.06
LRCH3-216ENST00000481048 RIPK4P57078 832 aa8.43□□□□□ -1.06
LRCH3-216ENST00000481048 SETDB1Q15047 1291 aa8.43□□□□□ -1.06
LRCH3-216ENST00000481048 HSP90AB3PQ58FF7 597 aa8.43□□□□□ -1.06
LRCH3-216ENST00000481048 SLC10A5Q5PT55 438 aa8.43□□□□□ -1.06
LRCH3-216ENST00000481048 TTLL7Q6ZT98 887 aa8.43□□□□□ -1.06
LRCH3-216ENST00000481048 MAP4K3Q8IVH8 894 aa8.43□□□□□ -1.06
LRCH3-216ENST00000481048 ETFBKMTQ8IXQ9 262 aa8.43□□□□□ -1.06
LRCH3-216ENST00000481048 GPC2Q8N158 579 aa8.43□□□□□ -1.06
LRCH3-216ENST00000481048 RPGRQ92834 1020 aaKnown RBP8.43□□□□□ -1.06
LRCH3-216ENST00000481048 TMX4Q9H1E5 349 aaPredicted RBP8.43□□□□□ -1.06
LRCH3-216ENST00000481048 SRA1Q9HD15 236 aaKnown RBP8.43□□□□□ -1.06
LRCH3-216ENST00000481048 ZNF277Q9NRM2 450 aaPredicted RBP8.43□□□□□ -1.06
LRCH3-216ENST00000481048 HACL1Q9UJ83 578 aa8.43□□□□□ -1.06
LRCH3-216ENST00000481048 TRIM33Q9UPN9 1127 aa8.43□□□□□ -1.06
LRCH3-216ENST00000481048 PASKQ96RG2 1323 aa8.43□□□□□ -1.06
LRCH3-216ENST00000481048 ANKRD36CQ5JPF3 1778 aa8.43□□□□□ -1.06
LRCH3-216ENST00000481048 PRMT3O60678 531 aa8.42□□□□□ -1.06
LRCH3-216ENST00000481048 HOXD8P13378 290 aaPredicted RBP8.42□□□□□ -1.06
LRCH3-216ENST00000481048 EPHX2P34913 555 aa8.42□□□□□ -1.06
LRCH3-216ENST00000481048 TMPOP42166 694 aaKnown RBP8.42□□□□□ -1.06
LRCH3-216ENST00000481048 EIF6P56537 245 aaKnown RBP8.42□□□□□ -1.06
LRCH3-216ENST00000481048 SUSD4Q5VX71 490 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms