RNA–Protein interactions for RNA: ENST00000480836.5

PTPN7-212, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,189 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-212ENST00000480836 GRB14Q14449 540 aa16.11■□□□□ 0.17
PTPN7-212ENST00000480836 TTF1Q15361 905 aaPredicted RBP16.11■□□□□ 0.17
PTPN7-212ENST00000480836 HSP90AB4PQ58FF6 505 aa16.11■□□□□ 0.17
PTPN7-212ENST00000480836 WDR78Q5VTH9 848 aa16.11■□□□□ 0.17
PTPN7-212ENST00000480836 CERS3Q8IU89 383 aa16.11■□□□□ 0.17
PTPN7-212ENST00000480836 PAG1Q9NWQ8 432 aa16.11■□□□□ 0.17
PTPN7-212ENST00000480836 BAZ2AQ9UIF9 1905 aaKnown RBP16.1■□□□□ 0.17
PTPN7-212ENST00000480836 USP17L12C9JPN9 530 aa16.1■□□□□ 0.17
PTPN7-212ENST00000480836 USP17L21D6R901 530 aa16.1■□□□□ 0.17
PTPN7-212ENST00000480836 COG2Q14746 738 aa16.1■□□□□ 0.17
PTPN7-212ENST00000480836 PRAMEF19Q5SWL8 479 aa16.1■□□□□ 0.17
PTPN7-212ENST00000480836 C12orf60Q5U649 245 aa16.1■□□□□ 0.17
PTPN7-212ENST00000480836 CCAR1Q8IX12 1150 aaKnown RBP16.1■□□□□ 0.17
PTPN7-212ENST00000480836 SPICE1Q8N0Z3 855 aa16.1■□□□□ 0.17
PTPN7-212ENST00000480836 GTF3C2Q8WUA4 911 aaPredicted RBP16.1■□□□□ 0.17
PTPN7-212ENST00000480836 HAUS7Q99871 368 aa16.1■□□□□ 0.17
PTPN7-212ENST00000480836 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.1■□□□□ 0.17
PTPN7-212ENST00000480836 PUS7LQ9H0K6 701 aaKnown RBP16.1■□□□□ 0.17
PTPN7-212ENST00000480836 CDK8P49336 464 aa16.09■□□□□ 0.17
PTPN7-212ENST00000480836 TMED8Q6PL24 325 aaPredicted RBP16.09■□□□□ 0.17
PTPN7-212ENST00000480836 Q7L0L9 218 aa16.09■□□□□ 0.17
PTPN7-212ENST00000480836 DDX19BQ9UMR2 479 aa16.09■□□□□ 0.17
PTPN7-212ENST00000480836 LAMA3Q16787 3333 aa16.09■□□□□ 0.17
PTPN7-212ENST00000480836 FRMPD3Q5JV73 1810 aa16.08■□□□□ 0.17
PTPN7-212ENST00000480836 A0A1W2PPC1 479 aa16.08■□□□□ 0.16
PTPN7-212ENST00000480836 RAB11FIP3O75154 756 aa16.08■□□□□ 0.16
PTPN7-212ENST00000480836 ERCC3P19447 782 aa16.08■□□□□ 0.16
PTPN7-212ENST00000480836 DSG3P32926 999 aa16.08■□□□□ 0.16
PTPN7-212ENST00000480836 ANO1Q5XXA6 986 aa16.08■□□□□ 0.16
PTPN7-212ENST00000480836 TRMT44Q8IYL2 757 aaKnown RBP16.08■□□□□ 0.16
PTPN7-212ENST00000480836 ATG4CQ96DT6 458 aa16.08■□□□□ 0.16
PTPN7-212ENST00000480836 SPATC1LQ9H0A9 340 aa16.08■□□□□ 0.16
PTPN7-212ENST00000480836 FBXO28Q9NVF7 368 aa16.08■□□□□ 0.16
PTPN7-212ENST00000480836 CYBAP13498 195 aa16.07■□□□□ 0.16
PTPN7-212ENST00000480836 ADORA2AP29274 412 aa16.07■□□□□ 0.16
PTPN7-212ENST00000480836 CCNA1P78396 465 aa16.07■□□□□ 0.16
PTPN7-212ENST00000480836 CTR9Q6PD62 1173 aa16.07■□□□□ 0.16
PTPN7-212ENST00000480836 TMEM179Q6ZVK1 233 aa16.07■□□□□ 0.16
PTPN7-212ENST00000480836 TANGO6Q9C0B7 1094 aa16.07■□□□□ 0.16
PTPN7-212ENST00000480836 SENP6Q9GZR1 1112 aaPredicted RBP16.07■□□□□ 0.16
PTPN7-212ENST00000480836 DDX20Q9UHI6 824 aaKnown RBP16.07■□□□□ 0.16
PTPN7-212ENST00000480836 TMX2Q9Y320 296 aa16.07■□□□□ 0.16
PTPN7-212ENST00000480836 A0A0G2JMZ2 1700 aa16.06■□□□□ 0.16
PTPN7-212ENST00000480836 EEF2P13639 858 aaKnown RBP16.06■□□□□ 0.16
PTPN7-212ENST00000480836 CNGA1P29973 690 aa16.06■□□□□ 0.16
PTPN7-212ENST00000480836 ATN1P54259 1190 aaPredicted RBP16.06■□□□□ 0.16
PTPN7-212ENST00000480836 MDM2Q00987 491 aaPredicted RBP16.06■□□□□ 0.16
PTPN7-212ENST00000480836 ATP2B2Q01814 1243 aa16.06■□□□□ 0.16
PTPN7-212ENST00000480836 TMEM132BQ14DG7 1078 aa16.06■□□□□ 0.16
PTPN7-212ENST00000480836 TSHZ3Q63HK5 1081 aa16.06■□□□□ 0.16
PTPN7-212ENST00000480836 VCPKMTQ9H867 229 aa16.06■□□□□ 0.16
PTPN7-212ENST00000480836 HOXC10Q9NYD6 342 aa16.06■□□□□ 0.16
PTPN7-212ENST00000480836 RCAN3Q9UKA8 241 aa16.06■□□□□ 0.16
PTPN7-212ENST00000480836 ADAMTS5Q9UNA0 930 aa16.06■□□□□ 0.16
PTPN7-212ENST00000480836 HMMRO75330 724 aa16.05■□□□□ 0.16
PTPN7-212ENST00000480836 UBE3CQ15386 1083 aa16.05■□□□□ 0.16
PTPN7-212ENST00000480836 GJC2Q5T442 439 aaPredicted RBP16.05■□□□□ 0.16
PTPN7-212ENST00000480836 MFSD14CQ5VZR4 134 aa16.05■□□□□ 0.16
PTPN7-212ENST00000480836 C16orf86Q6ZW13 317 aa16.05■□□□□ 0.16
PTPN7-212ENST00000480836 CWC22Q9HCG8 908 aaKnown RBP16.05■□□□□ 0.16
PTPN7-212ENST00000480836 ATP8A2Q9NTI2 1148 aa16.05■□□□□ 0.16
PTPN7-212ENST00000480836 SWAP70Q9UH65 585 aa16.05■□□□□ 0.16
PTPN7-212ENST00000480836 SLC4A4Q9Y6R1 1079 aa16.05■□□□□ 0.16
PTPN7-212ENST00000480836 PARP14Q460N5 1801 aa16.05■□□□□ 0.16
PTPN7-212ENST00000480836 MS4A1P11836 297 aa16.04■□□□□ 0.16
PTPN7-212ENST00000480836 ICA1Q05084 483 aa16.04■□□□□ 0.16
PTPN7-212ENST00000480836 SAMD1Q6SPF0 538 aaPredicted RBP16.04■□□□□ 0.16
PTPN7-212ENST00000480836 DPP9Q86TI2 863 aa16.04■□□□□ 0.16
PTPN7-212ENST00000480836 STK11IPQ8N1F8 1099 aa16.04■□□□□ 0.16
PTPN7-212ENST00000480836 LPAR1Q92633 364 aa16.04■□□□□ 0.16
PTPN7-212ENST00000480836 STRBPQ96SI9 672 aaKnown RBP16.04■□□□□ 0.16
PTPN7-212ENST00000480836 GSG1L2A8MUP6 293 aa16.03■□□□□ 0.16
PTPN7-212ENST00000480836 FLOT1O75955 427 aa16.03■□□□□ 0.16
PTPN7-212ENST00000480836 GLRX3O76003 335 aaKnown RBP16.03■□□□□ 0.16
PTPN7-212ENST00000480836 PLS1Q14651 629 aa16.03■□□□□ 0.16
PTPN7-212ENST00000480836 LRIT3Q3SXY7 679 aa16.03■□□□□ 0.16
PTPN7-212ENST00000480836 TDHQ8IZJ6 230 aa16.03■□□□□ 0.16
PTPN7-212ENST00000480836 SHCBP1Q8NEM2 672 aa16.03■□□□□ 0.16
PTPN7-212ENST00000480836 REPS2Q8NFH8 660 aa16.03■□□□□ 0.16
PTPN7-212ENST00000480836 OSBP2Q969R2 916 aa16.03■□□□□ 0.16
PTPN7-212ENST00000480836 NUP88Q99567 741 aaPredicted RBP16.03■□□□□ 0.16
PTPN7-212ENST00000480836 UBE2OQ9C0C9 1292 aaKnown RBP16.03■□□□□ 0.16
PTPN7-212ENST00000480836 IVNS1ABPQ9Y6Y0 642 aa16.03■□□□□ 0.16
PTPN7-212ENST00000480836 ZNFX1Q9P2E3 1918 aaKnown RBP16.02■□□□□ 0.16
PTPN7-212ENST00000480836 STRNO43815 780 aa16.02■□□□□ 0.16
PTPN7-212ENST00000480836 PGK2P07205 417 aa16.02■□□□□ 0.16
PTPN7-212ENST00000480836 TAL1P17542 331 aaPredicted RBP16.02■□□□□ 0.16
PTPN7-212ENST00000480836 OLFML2BQ68BL8 750 aa16.02■□□□□ 0.16
PTPN7-212ENST00000480836 NCAPG2Q86XI2 1143 aa16.02■□□□□ 0.16
PTPN7-212ENST00000480836 LRRCC1Q9C099 1032 aa16.02■□□□□ 0.16
PTPN7-212ENST00000480836 COL11A1P12107 1806 aaPredicted RBP16.02■□□□□ 0.16
PTPN7-212ENST00000480836 SMCHD1A6NHR9 2005 aa16.01■□□□□ 0.15
PTPN7-212ENST00000480836 RASA1P20936 1047 aa16.01■□□□□ 0.15
PTPN7-212ENST00000480836 OTUD7AQ8TE49 926 aaPredicted RBP16.01■□□□□ 0.15
PTPN7-212ENST00000480836 MAML3Q96JK9 1138 aa16.01■□□□□ 0.15
PTPN7-212ENST00000480836 CCDC17Q96LX7 622 aa16.01■□□□□ 0.15
PTPN7-212ENST00000480836 EPB41L4AQ9HCS5 686 aaPredicted RBP16.01■□□□□ 0.15
PTPN7-212ENST00000480836 RIPK3Q9Y572 518 aa16.01■□□□□ 0.15
PTPN7-212ENST00000480836 ZNF236Q9UL36 1845 aa16.01■□□□□ 0.15
PTPN7-212ENST00000480836 MYH8P13535 1937 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms