RNA–Protein interactions for RNA: ENST00000480484.5

COMMD4-203, Transcript of COMM domain containing 4, humanhuman

TSL 1 (best)

Gene COMMD4, Length 3,225 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-203ENST00000480484 ERVV-2B6SEH9 535 aa11.49□□□□□ -0.57
COMMD4-203ENST00000480484 SNAP23O00161 211 aa11.49□□□□□ -0.57
COMMD4-203ENST00000480484 ERLIN1O75477 346 aa11.49□□□□□ -0.57
COMMD4-203ENST00000480484 BEND6Q5SZJ8 279 aaPredicted RBP11.49□□□□□ -0.57
COMMD4-203ENST00000480484 MYSM1Q5VVJ2 828 aa11.49□□□□□ -0.57
COMMD4-203ENST00000480484 FCHSD1Q86WN1 690 aa11.49□□□□□ -0.57
COMMD4-203ENST00000480484 DEF6Q9H4E7 631 aa11.49□□□□□ -0.57
COMMD4-203ENST00000480484 UTRNP46939 3433 aa11.49□□□□□ -0.57
COMMD4-203ENST00000480484 STK10O94804 968 aaKnown RBP11.48□□□□□ -0.57
COMMD4-203ENST00000480484 DNAJC10Q8IXB1 793 aa11.48□□□□□ -0.57
COMMD4-203ENST00000480484 CPLX3Q8WVH0 158 aa11.48□□□□□ -0.57
COMMD4-203ENST00000480484 FAM89AQ96GI7 184 aa11.48□□□□□ -0.57
COMMD4-203ENST00000480484 MRPL44Q9H9J2 332 aaKnown RBP11.48□□□□□ -0.57
COMMD4-203ENST00000480484 PAG1Q9NWQ8 432 aa11.48□□□□□ -0.57
COMMD4-203ENST00000480484 TOGARAM1Q9Y4F4 1720 aa11.48□□□□□ -0.57
COMMD4-203ENST00000480484 PPP4CP60510 307 aa11.48□□□□□ -0.57
COMMD4-203ENST00000480484 EXOSC10Q01780 885 aaKnown RBP11.48□□□□□ -0.57
COMMD4-203ENST00000480484 KIF4BQ2VIQ3 1234 aa11.48□□□□□ -0.57
COMMD4-203ENST00000480484 WDR78Q5VTH9 848 aa11.48□□□□□ -0.57
COMMD4-203ENST00000480484 SRGAP1Q7Z6B7 1085 aa11.48□□□□□ -0.57
COMMD4-203ENST00000480484 IQUBQ8NA54 791 aa11.48□□□□□ -0.57
COMMD4-203ENST00000480484 KBTBD3Q8NAB2 608 aa11.48□□□□□ -0.57
COMMD4-203ENST00000480484 CNNM3Q8NE01 707 aa11.48□□□□□ -0.57
COMMD4-203ENST00000480484 ANKZF1Q9H8Y5 726 aa11.48□□□□□ -0.57
COMMD4-203ENST00000480484 MKRN1Q9UHC7 482 aaKnown RBP11.48□□□□□ -0.57
COMMD4-203ENST00000480484 FBXO9Q9UK97 447 aaPredicted RBP11.48□□□□□ -0.57
COMMD4-203ENST00000480484 AKAP2Q9Y2D5 859 aa11.48□□□□□ -0.57
COMMD4-203ENST00000480484 DPYSL4O14531 572 aa11.48□□□□□ -0.57
COMMD4-203ENST00000480484 CPLX1O14810 134 aa11.48□□□□□ -0.57
COMMD4-203ENST00000480484 ATP2B1P20020 1258 aa11.48□□□□□ -0.57
COMMD4-203ENST00000480484 ANTXR2P58335 489 aa11.48□□□□□ -0.57
COMMD4-203ENST00000480484 ANO1Q5XXA6 986 aa11.48□□□□□ -0.57
COMMD4-203ENST00000480484 CARD10Q9BWT7 1032 aa11.48□□□□□ -0.57
COMMD4-203ENST00000480484 PUS7LQ9H0K6 701 aaKnown RBP11.48□□□□□ -0.57
COMMD4-203ENST00000480484 YY1AP1Q9H869 796 aa11.48□□□□□ -0.57
COMMD4-203ENST00000480484 GEMIN8Q9NWZ8 242 aaKnown RBP11.48□□□□□ -0.57
COMMD4-203ENST00000480484 HPS5Q9UPZ3 1129 aa11.48□□□□□ -0.57
COMMD4-203ENST00000480484 SALL1Q9NSC2 1324 aa11.47□□□□□ -0.57
COMMD4-203ENST00000480484 SOWAHDA6NJG2 315 aa11.47□□□□□ -0.57
COMMD4-203ENST00000480484 CUTAO60888 179 aa11.47□□□□□ -0.57
COMMD4-203ENST00000480484 YEATS4O95619 227 aa11.47□□□□□ -0.57
COMMD4-203ENST00000480484 KCTD19Q17RG1 926 aaPredicted RBP11.47□□□□□ -0.57
COMMD4-203ENST00000480484 PPM1EQ8WY54 764 aa11.47□□□□□ -0.57
COMMD4-203ENST00000480484 BIN2Q9UBW5 565 aaPredicted RBP11.47□□□□□ -0.57
COMMD4-203ENST00000480484 KLF15Q9UIH9 416 aa11.47□□□□□ -0.57
COMMD4-203ENST00000480484 COMMD10Q9Y6G5 202 aa11.47□□□□□ -0.57
COMMD4-203ENST00000480484 EYA2O00167 538 aa11.47□□□□□ -0.57
COMMD4-203ENST00000480484 STX10O60499 249 aa11.47□□□□□ -0.57
COMMD4-203ENST00000480484 GUCY2CP25092 1073 aa11.47□□□□□ -0.57
COMMD4-203ENST00000480484 TC2NQ8N9U0 490 aa11.47□□□□□ -0.57
COMMD4-203ENST00000480484 PIGBQ92521 554 aa11.47□□□□□ -0.57
COMMD4-203ENST00000480484 PCDH12Q9NPG4 1184 aa11.47□□□□□ -0.57
COMMD4-203ENST00000480484 KLF18A0A0U1RQI7 1052 aa11.47□□□□□ -0.57
COMMD4-203ENST00000480484 CMA1P23946 247 aa11.47□□□□□ -0.57
COMMD4-203ENST00000480484 GPTP24298 496 aa11.47□□□□□ -0.57
COMMD4-203ENST00000480484 ZNF569Q5MCW4 686 aa11.47□□□□□ -0.57
COMMD4-203ENST00000480484 AXDND1Q5T1B0 1012 aaPredicted RBP11.47□□□□□ -0.57
COMMD4-203ENST00000480484 ZNF280DQ6N043 979 aa11.47□□□□□ -0.57
COMMD4-203ENST00000480484 LRRC31Q6UY01 552 aa11.47□□□□□ -0.57
COMMD4-203ENST00000480484 USP49Q70CQ1 688 aa11.47□□□□□ -0.57
COMMD4-203ENST00000480484 MICALL1Q8N3F8 863 aa11.47□□□□□ -0.57
COMMD4-203ENST00000480484 FAM204AQ9H8W3 233 aa11.47□□□□□ -0.57
COMMD4-203ENST00000480484 TMOD3Q9NYL9 352 aa11.47□□□□□ -0.57
COMMD4-203ENST00000480484 TAF1LQ8IZX4 1826 aa11.46□□□□□ -0.57
COMMD4-203ENST00000480484 EXOC5O00471 708 aa11.46□□□□□ -0.57
COMMD4-203ENST00000480484 KIF5CO60282 957 aa11.46□□□□□ -0.57
COMMD4-203ENST00000480484 CCDC175P0C221 793 aa11.46□□□□□ -0.57
COMMD4-203ENST00000480484 PRR29P0C7W0 189 aa11.46□□□□□ -0.57
COMMD4-203ENST00000480484 IBSPP21815 317 aaPredicted RBP11.46□□□□□ -0.57
COMMD4-203ENST00000480484 VSNL1P62760 191 aa11.46□□□□□ -0.57
COMMD4-203ENST00000480484 CASP8Q14790 479 aa11.46□□□□□ -0.57
COMMD4-203ENST00000480484 SPECC1LQ69YQ0 1117 aa11.46□□□□□ -0.57
COMMD4-203ENST00000480484 SDR16C5Q8N3Y7 309 aa11.46□□□□□ -0.57
COMMD4-203ENST00000480484 JDP2Q8WYK2 163 aa11.46□□□□□ -0.57
COMMD4-203ENST00000480484 TINF2Q9BSI4 451 aa11.46□□□□□ -0.57
COMMD4-203ENST00000480484 TNS2Q63HR2 1409 aa11.46□□□□□ -0.58
COMMD4-203ENST00000480484 GOLGA8BA8MQT2 603 aa11.46□□□□□ -0.58
COMMD4-203ENST00000480484 IFIT1P09914 478 aaKnown RBP11.46□□□□□ -0.58
COMMD4-203ENST00000480484 HLFQ16534 295 aa11.46□□□□□ -0.58
COMMD4-203ENST00000480484 SHC4Q6S5L8 630 aa11.46□□□□□ -0.58
COMMD4-203ENST00000480484 MED15Q96RN5 788 aa11.46□□□□□ -0.58
COMMD4-203ENST00000480484 MYCBPQ99417 103 aaPredicted RBP11.46□□□□□ -0.58
COMMD4-203ENST00000480484 TFR2Q9UP52 801 aa11.46□□□□□ -0.58
COMMD4-203ENST00000480484 PCNTO95613 3336 aa11.46□□□□□ -0.58
COMMD4-203ENST00000480484 IL15P40933 162 aaPredicted RBP11.45□□□□□ -0.58
COMMD4-203ENST00000480484 FMR1Q06787 632 aaKnown RBP eCLIP11.45□□□□□ -0.58
COMMD4-203ENST00000480484 ENOX2Q16206 610 aaKnown RBP11.45□□□□□ -0.58
COMMD4-203ENST00000480484 WASHC4Q2M389 1173 aa11.45□□□□□ -0.58
COMMD4-203ENST00000480484 RAVER1Q8IY67 606 aaKnown RBP11.45□□□□□ -0.58
COMMD4-203ENST00000480484 CEP112Q8N8E3 955 aa11.45□□□□□ -0.58
COMMD4-203ENST00000480484 L1RE1Q9UN81 338 aa11.45□□□□□ -0.58
COMMD4-203ENST00000480484 NFE2L3Q9Y4A8 694 aa11.45□□□□□ -0.58
COMMD4-203ENST00000480484 PCDHA5Q9Y5H7 936 aa11.45□□□□□ -0.58
COMMD4-203ENST00000480484 ITGB4P16144 1822 aa11.45□□□□□ -0.58
COMMD4-203ENST00000480484 hCG_1642624A0A1W2PR95 340 aa11.45□□□□□ -0.58
COMMD4-203ENST00000480484 GUCY1A2P33402 732 aa11.45□□□□□ -0.58
COMMD4-203ENST00000480484 TMEM164Q5U3C3 297 aa11.45□□□□□ -0.58
COMMD4-203ENST00000480484 FBXO33Q7Z6M2 555 aa11.45□□□□□ -0.58
COMMD4-203ENST00000480484 ATL2Q8NHH9 583 aa11.45□□□□□ -0.58
COMMD4-203ENST00000480484 NLRP7Q8WX94 980 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms