RNA–Protein interactions for RNA: ENST00000480166.3

RN7SL88P-201, Transcript of RNA, 7SL, cytoplasmic 88, pseudogene, humanhuman

BASIC

Gene RN7SL88P, Length 299 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL88P-201ENST00000480166 COL2A1P02458 1487 aaPredicted RBP8.4□□□□□ -1.06
RN7SL88P-201ENST00000480166 PASKQ96RG2 1323 aa8.4□□□□□ -1.06
RN7SL88P-201ENST00000480166 MPHOSPH10O00566 681 aaKnown RBP8.4□□□□□ -1.06
RN7SL88P-201ENST00000480166 CDKL5O76039 1030 aa8.4□□□□□ -1.06
RN7SL88P-201ENST00000480166 GOLGA8HP0CJ92 632 aa8.4□□□□□ -1.06
RN7SL88P-201ENST00000480166 NCLP19338 710 aaKnown RBP8.4□□□□□ -1.06
RN7SL88P-201ENST00000480166 NOVP48745 357 aa8.4□□□□□ -1.06
RN7SL88P-201ENST00000480166 GRM4Q14833 912 aa8.4□□□□□ -1.06
RN7SL88P-201ENST00000480166 TPRNQ4KMQ1 711 aa8.4□□□□□ -1.06
RN7SL88P-201ENST00000480166 CPLX2Q6PUV4 134 aaKnown RBP8.4□□□□□ -1.06
RN7SL88P-201ENST00000480166 USP48Q86UV5 1035 aa8.4□□□□□ -1.06
RN7SL88P-201ENST00000480166 DGKHQ86XP1 1220 aa8.4□□□□□ -1.06
RN7SL88P-201ENST00000480166 GPT2Q8TD30 523 aa8.4□□□□□ -1.06
RN7SL88P-201ENST00000480166 TRPM4Q8TD43 1214 aa8.4□□□□□ -1.06
RN7SL88P-201ENST00000480166 CSRNP1Q96S65 589 aa8.4□□□□□ -1.06
RN7SL88P-201ENST00000480166 TMEM39BQ9GZU3 492 aa8.4□□□□□ -1.06
RN7SL88P-201ENST00000480166 ZNF287Q9HBT7 754 aa8.4□□□□□ -1.06
RN7SL88P-201ENST00000480166 TMOD2Q9NZR1 351 aa8.4□□□□□ -1.06
RN7SL88P-201ENST00000480166 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.4□□□□□ -1.06
RN7SL88P-201ENST00000480166 PI4KBQ9UBF8 816 aa8.4□□□□□ -1.06
RN7SL88P-201ENST00000480166 SWAP70Q9UH65 585 aa8.4□□□□□ -1.06
RN7SL88P-201ENST00000480166 FRMPD2Q68DX3 1309 aaPredicted RBP8.39□□□□□ -1.07
RN7SL88P-201ENST00000480166 CALM1P0DP23 149 aa8.39□□□□□ -1.07
RN7SL88P-201ENST00000480166 CALM2P0DP24 149 aa8.39□□□□□ -1.07
RN7SL88P-201ENST00000480166 CALM3P0DP25 149 aa8.39□□□□□ -1.07
RN7SL88P-201ENST00000480166 RPS12P25398 132 aaKnown RBP8.39□□□□□ -1.07
RN7SL88P-201ENST00000480166 VEGFBP49765 207 aa8.39□□□□□ -1.07
RN7SL88P-201ENST00000480166 ATP2B2Q01814 1243 aa8.39□□□□□ -1.07
RN7SL88P-201ENST00000480166 KIF23Q02241 960 aaPredicted RBP8.39□□□□□ -1.07
RN7SL88P-201ENST00000480166 PKN1Q16512 942 aa8.39□□□□□ -1.07
RN7SL88P-201ENST00000480166 KRT40Q6A162 431 aa8.39□□□□□ -1.07
RN7SL88P-201ENST00000480166 USP17L2Q6R6M4 530 aa8.39□□□□□ -1.07
RN7SL88P-201ENST00000480166 METTL16Q86W50 562 aaKnown RBP8.39□□□□□ -1.07
RN7SL88P-201ENST00000480166 LDHDQ86WU2 507 aa8.39□□□□□ -1.07
RN7SL88P-201ENST00000480166 FBXO18Q8NFZ0 1043 aa8.39□□□□□ -1.07
RN7SL88P-201ENST00000480166 CTCFLQ8NI51 663 aaPredicted RBP8.39□□□□□ -1.07
RN7SL88P-201ENST00000480166 FAM151AQ8WW52 585 aa8.39□□□□□ -1.07
RN7SL88P-201ENST00000480166 GZF1Q9H116 711 aaPredicted RBP8.39□□□□□ -1.07
RN7SL88P-201ENST00000480166 DHX36Q9H2U1 1008 aaKnown RBP8.39□□□□□ -1.07
RN7SL88P-201ENST00000480166 TAF1DQ9H5J8 278 aaPredicted RBP8.39□□□□□ -1.07
RN7SL88P-201ENST00000480166 PRDM10Q9NQV6 1147 aa8.39□□□□□ -1.07
RN7SL88P-201ENST00000480166 RBM28Q9NW13 759 aaKnown RBP8.39□□□□□ -1.07
RN7SL88P-201ENST00000480166 MTMR4Q9NYA4 1195 aa8.39□□□□□ -1.07
RN7SL88P-201ENST00000480166 RBM27Q9P2N5 1060 aaKnown RBP8.39□□□□□ -1.07
RN7SL88P-201ENST00000480166 TFIP11Q9UBB9 837 aaKnown RBP8.39□□□□□ -1.07
RN7SL88P-201ENST00000480166 PGAP2Q9UHJ9 254 aa8.39□□□□□ -1.07
RN7SL88P-201ENST00000480166 MAD2L2Q9UI95 211 aa8.39□□□□□ -1.07
RN7SL88P-201ENST00000480166 CNOT7Q9UIV1 285 aaKnown RBP8.39□□□□□ -1.07
RN7SL88P-201ENST00000480166 KCNJ14Q9UNX9 436 aa8.39□□□□□ -1.07
RN7SL88P-201ENST00000480166 KIF3AQ9Y496 699 aa8.39□□□□□ -1.07
RN7SL88P-201ENST00000480166 GREB1LQ9C091 1923 aaPredicted RBP8.39□□□□□ -1.07
RN7SL88P-201ENST00000480166 CCDC196A0A1B0GTZ2 297 aa8.38□□□□□ -1.07
RN7SL88P-201ENST00000480166 IQCA1LA6NCM1 817 aa8.38□□□□□ -1.07
RN7SL88P-201ENST00000480166 USP17L5A8MUK1 530 aa8.38□□□□□ -1.07
RN7SL88P-201ENST00000480166 GOLGA6L22H0YM25 854 aa8.38□□□□□ -1.07
RN7SL88P-201ENST00000480166 ADAMTS3O15072 1205 aa8.38□□□□□ -1.07
RN7SL88P-201ENST00000480166 CYTH3O43739 400 aa8.38□□□□□ -1.07
RN7SL88P-201ENST00000480166 ITGBL1O95965 494 aaPredicted RBP8.38□□□□□ -1.07
RN7SL88P-201ENST00000480166 TOP1P11387 765 aaKnown RBP8.38□□□□□ -1.07
RN7SL88P-201ENST00000480166 CTCFP49711 727 aaPredicted RBP8.38□□□□□ -1.07
RN7SL88P-201ENST00000480166 NT5C2P49902 561 aa8.38□□□□□ -1.07
RN7SL88P-201ENST00000480166 SEPT2Q15019 361 aa8.38□□□□□ -1.07
RN7SL88P-201ENST00000480166 KIF4BQ2VIQ3 1234 aa8.38□□□□□ -1.07
RN7SL88P-201ENST00000480166 CERKLQ49MI3 558 aaPredicted RBP8.38□□□□□ -1.07
RN7SL88P-201ENST00000480166 TATDN1Q6P1N9 297 aa8.38□□□□□ -1.07
RN7SL88P-201ENST00000480166 TRIM22Q8IYM9 498 aa8.38□□□□□ -1.07
RN7SL88P-201ENST00000480166 TMEM87AQ8NBN3 555 aa8.38□□□□□ -1.07
RN7SL88P-201ENST00000480166 L3MBTL3Q96JM7 780 aaPredicted RBP8.38□□□□□ -1.07
RN7SL88P-201ENST00000480166 USP28Q96RU2 1077 aa8.38□□□□□ -1.07
RN7SL88P-201ENST00000480166 TRIM34Q9BYJ4 488 aa8.38□□□□□ -1.07
RN7SL88P-201ENST00000480166 VPS54Q9P1Q0 977 aa8.38□□□□□ -1.07
RN7SL88P-201ENST00000480166 CLIP2Q9UDT6 1046 aa8.38□□□□□ -1.07
RN7SL88P-201ENST00000480166 V9GY48 417 aaPredicted RBP8.38□□□□□ -1.07
RN7SL88P-201ENST00000480166 PALM3A6NDB9 673 aaPredicted RBP8.37□□□□□ -1.07
RN7SL88P-201ENST00000480166 TMEM88BA6NKF7 163 aa8.37□□□□□ -1.07
RN7SL88P-201ENST00000480166 PRPF3O43395 683 aaKnown RBP8.37□□□□□ -1.07
RN7SL88P-201ENST00000480166 DEXIO95424 95 aa8.37□□□□□ -1.07
RN7SL88P-201ENST00000480166 GH2P01242 217 aa8.37□□□□□ -1.07
RN7SL88P-201ENST00000480166 PDHBP11177 359 aa8.37□□□□□ -1.07
RN7SL88P-201ENST00000480166 EEF2P13639 858 aaKnown RBP8.37□□□□□ -1.07
RN7SL88P-201ENST00000480166 CEBPZQ03701 1054 aaKnown RBP8.37□□□□□ -1.07
RN7SL88P-201ENST00000480166 RASA3Q14644 834 aa8.37□□□□□ -1.07
RN7SL88P-201ENST00000480166 EAPPQ56P03 285 aaPredicted RBP8.37□□□□□ -1.07
RN7SL88P-201ENST00000480166 CCDC178Q5BJE1 867 aa8.37□□□□□ -1.07
RN7SL88P-201ENST00000480166 MIGA2Q7L4E1 593 aa8.37□□□□□ -1.07
RN7SL88P-201ENST00000480166 CCDC84Q86UT8 332 aaPredicted RBP8.37□□□□□ -1.07
RN7SL88P-201ENST00000480166 SIAH1Q8IUQ4 282 aa8.37□□□□□ -1.07
RN7SL88P-201ENST00000480166 OXER1Q8TDS5 423 aa8.37□□□□□ -1.07
RN7SL88P-201ENST00000480166 DPF2Q92785 391 aa8.37□□□□□ -1.07
RN7SL88P-201ENST00000480166 GPKOWQ92917 476 aaPredicted RBP eCLIP8.37□□□□□ -1.07
RN7SL88P-201ENST00000480166 TEPSINQ96N21 525 aa8.37□□□□□ -1.07
RN7SL88P-201ENST00000480166 RNF26Q9BY78 433 aaPredicted RBP8.37□□□□□ -1.07
RN7SL88P-201ENST00000480166 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.37□□□□□ -1.07
RN7SL88P-201ENST00000480166 HACL1Q9UJ83 578 aa8.37□□□□□ -1.07
RN7SL88P-201ENST00000480166 FAM205CA6NFA0 338 aa8.36□□□□□ -1.07
RN7SL88P-201ENST00000480166 MYO1BO43795 1136 aa8.36□□□□□ -1.07
RN7SL88P-201ENST00000480166 TTLL1O95922 423 aa8.36□□□□□ -1.07
RN7SL88P-201ENST00000480166 MMP1P03956 469 aa8.36□□□□□ -1.07
RN7SL88P-201ENST00000480166 KIF5BP33176 963 aa8.36□□□□□ -1.07
RN7SL88P-201ENST00000480166 EPS15P42566 896 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms