RNA–Protein interactions for RNA: ENST00000479958.6

COMMD3-212, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 1,443 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-212ENST00000479958 SCAMP3O14828 347 aaKnown RBP8.78□□□□□ -1
COMMD3-212ENST00000479958 CRKP46108 304 aa8.78□□□□□ -1
COMMD3-212ENST00000479958 RAD51AP2Q09MP3 1159 aa8.78□□□□□ -1
COMMD3-212ENST00000479958 SLITRK4Q8IW52 837 aa8.78□□□□□ -1
COMMD3-212ENST00000479958 TMEM40Q8WWA1 233 aa8.78□□□□□ -1
COMMD3-212ENST00000479958 FAM168AQ92567 244 aa8.78□□□□□ -1
COMMD3-212ENST00000479958 ALPK1Q96QP1 1244 aa8.78□□□□□ -1
COMMD3-212ENST00000479958 CTNND2Q9UQB3 1225 aa8.78□□□□□ -1
COMMD3-212ENST00000479958 DNAJA2O60884 412 aa8.77□□□□□ -1.01
COMMD3-212ENST00000479958 RNF4P78317 190 aa8.77□□□□□ -1.01
COMMD3-212ENST00000479958 FANCCQ00597 558 aa8.77□□□□□ -1.01
COMMD3-212ENST00000479958 CLEC16AQ2KHT3 1053 aa8.77□□□□□ -1.01
COMMD3-212ENST00000479958 CDCP2Q5VXM1 449 aa8.77□□□□□ -1.01
COMMD3-212ENST00000479958 LRRN2O75325 713 aa8.76□□□□□ -1.01
COMMD3-212ENST00000479958 SRFP11831 508 aa8.76□□□□□ -1.01
COMMD3-212ENST00000479958 GDNFP39905 211 aa8.76□□□□□ -1.01
COMMD3-212ENST00000479958 CCNFP41002 786 aa8.76□□□□□ -1.01
COMMD3-212ENST00000479958 CLCQ05315 142 aa8.76□□□□□ -1.01
COMMD3-212ENST00000479958 TSPYL5Q86VY4 417 aaPredicted RBP8.76□□□□□ -1.01
COMMD3-212ENST00000479958 EAF1Q96JC9 268 aaPredicted RBP8.76□□□□□ -1.01
COMMD3-212ENST00000479958 FAM53CQ9NYF3 392 aa8.76□□□□□ -1.01
COMMD3-212ENST00000479958 DUSP13Q9UII6 198 aa8.76□□□□□ -1.01
COMMD3-212ENST00000479958 ESR1P03372 595 aa8.75□□□□□ -1.01
COMMD3-212ENST00000479958 RAC2P15153 192 aa8.75□□□□□ -1.01
COMMD3-212ENST00000479958 KCNMB1Q16558 191 aa8.75□□□□□ -1.01
COMMD3-212ENST00000479958 ATG4CQ96DT6 458 aa8.75□□□□□ -1.01
COMMD3-212ENST00000479958 CNNM2Q9H8M5 875 aa8.75□□□□□ -1.01
COMMD3-212ENST00000479958 GOLGA2P5Q9HBQ8 144 aa8.75□□□□□ -1.01
COMMD3-212ENST00000479958 SLAMF8Q9P0V8 285 aa8.75□□□□□ -1.01
COMMD3-212ENST00000479958 RSF1Q96T23 1441 aaPredicted RBP8.74□□□□□ -1.01
COMMD3-212ENST00000479958 BTBD11A6QL63 1104 aa8.74□□□□□ -1.01
COMMD3-212ENST00000479958 IMPDH2P12268 514 aa8.74□□□□□ -1.01
COMMD3-212ENST00000479958 NLRC3Q7RTR2 1065 aa8.74□□□□□ -1.01
COMMD3-212ENST00000479958 TTC6Q86TZ1 520 aa8.74□□□□□ -1.01
COMMD3-212ENST00000479958 ZSWIM9Q86XI8 627 aa8.74□□□□□ -1.01
COMMD3-212ENST00000479958 ENOX1Q8TC92 643 aaKnown RBP8.74□□□□□ -1.01
COMMD3-212ENST00000479958 CARMIL2Q6F5E8 1435 aa8.73□□□□□ -1.01
COMMD3-212ENST00000479958 GAB4Q2WGN9 574 aa8.73□□□□□ -1.01
COMMD3-212ENST00000479958 OVOS1Q6IE37 1185 aa8.73□□□□□ -1.01
COMMD3-212ENST00000479958 KIRREL1Q96J84 757 aa8.73□□□□□ -1.01
COMMD3-212ENST00000479958 UBOX5O94941 541 aa8.72□□□□□ -1.01
COMMD3-212ENST00000479958 LTKP29376 864 aa8.72□□□□□ -1.01
COMMD3-212ENST00000479958 EGR3Q06889 387 aa8.72□□□□□ -1.01
COMMD3-212ENST00000479958 ZNF394Q53GI3 561 aa8.72□□□□□ -1.01
COMMD3-212ENST00000479958 TMEM67Q5HYA8 995 aa8.72□□□□□ -1.01
COMMD3-212ENST00000479958 ZNF654Q8IZM8 581 aa8.72□□□□□ -1.01
COMMD3-212ENST00000479958 DHX38Q92620 1227 aaKnown RBP8.72□□□□□ -1.01
COMMD3-212ENST00000479958 VWCEQ96DN2 955 aa8.72□□□□□ -1.01
COMMD3-212ENST00000479958 WASH4PA8MWX3 477 aa8.71□□□□□ -1.01
COMMD3-212ENST00000479958 CLEC3AO75596 197 aa8.71□□□□□ -1.01
COMMD3-212ENST00000479958 NME1P15531 152 aaKnown RBP8.71□□□□□ -1.01
COMMD3-212ENST00000479958 OGFOD2Q6N063 350 aa8.71□□□□□ -1.01
COMMD3-212ENST00000479958 DDX41Q9UJV9 622 aaKnown RBP8.71□□□□□ -1.01
COMMD3-212ENST00000479958 TMEM59LQ9UK28 342 aa8.71□□□□□ -1.01
COMMD3-212ENST00000479958 MROH2BQ7Z745 1585 aa8.71□□□□□ -1.02
COMMD3-212ENST00000479958 NBPF12Q5TAG4 269 aaPredicted RBP8.71□□□□□ -1.02
COMMD3-212ENST00000479958 POU5F2Q8N7G0 328 aa8.71□□□□□ -1.02
COMMD3-212ENST00000479958 MRRFQ96E11 262 aaKnown RBP8.71□□□□□ -1.02
COMMD3-212ENST00000479958 DHRS1Q96LJ7 313 aa8.71□□□□□ -1.02
COMMD3-212ENST00000479958 FERD3LQ96RJ6 166 aa8.71□□□□□ -1.02
COMMD3-212ENST00000479958 PCDHGB7Q9Y5F8 929 aa8.71□□□□□ -1.02
COMMD3-212ENST00000479958 MEIS3P2A8K0S8 358 aa8.7□□□□□ -1.02
COMMD3-212ENST00000479958 YBX3P16989 372 aaKnown RBP eCLIP8.7□□□□□ -1.023e-6■□□□□ 10
COMMD3-212ENST00000479958 NMIQ13287 307 aaPredicted RBP8.7□□□□□ -1.02
COMMD3-212ENST00000479958 INTS3Q68E01 1043 aaKnown RBP8.7□□□□□ -1.02
COMMD3-212ENST00000479958 SPATA32Q96LK8 384 aa8.7□□□□□ -1.02
COMMD3-212ENST00000479958 ADAMTS10Q9H324 1103 aa8.7□□□□□ -1.02
COMMD3-212ENST00000479958 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.7□□□□□ -1.02
COMMD3-212ENST00000479958 DNAJC25-GNG10A0A024R161 153 aa8.69□□□□□ -1.02
COMMD3-212ENST00000479958 RBAK-RBAKDNI3L0D1 243 aa8.69□□□□□ -1.02
COMMD3-212ENST00000479958 FARP2O94887 1054 aaPredicted RBP8.69□□□□□ -1.02
COMMD3-212ENST00000479958 RECKO95980 971 aa8.69□□□□□ -1.02
COMMD3-212ENST00000479958 GLI1P08151 1106 aa8.69□□□□□ -1.02
COMMD3-212ENST00000479958 HK2P52789 917 aa8.69□□□□□ -1.02
COMMD3-212ENST00000479958 COL9A2Q14055 689 aaPredicted RBP8.69□□□□□ -1.02
COMMD3-212ENST00000479958 RALGPS1Q5JS13 557 aa8.69□□□□□ -1.02
COMMD3-212ENST00000479958 SSU72P8A0A1W2PR75 194 aa8.68□□□□□ -1.02
COMMD3-212ENST00000479958 TNFRSF10CO14798 259 aa8.68□□□□□ -1.02
COMMD3-212ENST00000479958 RACK1P63244 317 aaKnown RBP8.68□□□□□ -1.02
COMMD3-212ENST00000479958 NBPF9Q3BBW0 867 aa8.68□□□□□ -1.02
COMMD3-212ENST00000479958 FYB2Q5VWT5 728 aa8.68□□□□□ -1.02
COMMD3-212ENST00000479958 FBXW10Q5XX13 1052 aa8.68□□□□□ -1.02
COMMD3-212ENST00000479958 OXR1Q8N573 874 aa8.68□□□□□ -1.02
COMMD3-212ENST00000479958 DAGLBQ8NCG7 672 aa8.68□□□□□ -1.02
COMMD3-212ENST00000479958 ABHD4Q8TB40 342 aa8.68□□□□□ -1.02
COMMD3-212ENST00000479958 SYTL5Q8TDW5 730 aaPredicted RBP8.68□□□□□ -1.02
COMMD3-212ENST00000479958 MYLIPQ8WY64 445 aa8.68□□□□□ -1.02
COMMD3-212ENST00000479958 ANTXR1Q9H6X2 564 aa8.68□□□□□ -1.02
COMMD3-212ENST00000479958 C19orf73Q9NVV2 129 aa8.68□□□□□ -1.02
COMMD3-212ENST00000479958 ZNRF3Q9ULT6 936 aa8.68□□□□□ -1.02
COMMD3-212ENST00000479958 PCDHA11Q9Y5I1 949 aa8.68□□□□□ -1.02
COMMD3-212ENST00000479958 LRRC10BA6NIK2 292 aa8.67□□□□□ -1.02
COMMD3-212ENST00000479958 POLR2BP30876 1174 aaKnown RBP8.67□□□□□ -1.02
COMMD3-212ENST00000479958 MPZL3Q6UWV2 235 aa8.67□□□□□ -1.02
COMMD3-212ENST00000479958 SPPL2CQ8IUH8 684 aa8.67□□□□□ -1.02
COMMD3-212ENST00000479958 CCDC9Q9Y3X0 531 aaKnown RBP8.67□□□□□ -1.02
COMMD3-212ENST00000479958 RNF111Q6ZNA4 994 aa8.66□□□□□ -1.02
COMMD3-212ENST00000479958 ZNF655Q8N720 491 aaPredicted RBP8.66□□□□□ -1.02
COMMD3-212ENST00000479958 PDZD8Q8NEN9 1154 aa8.66□□□□□ -1.02
COMMD3-212ENST00000479958 CRBNQ96SW2 442 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms