RNA–Protein interactions for RNA: ENST00000479660.1

CLDN18-203, Transcript of claudin 18, humanhuman

TSL 2

Gene CLDN18, Length 2,039 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18-203ENST00000479660 MYH8P13535 1937 aa16.65■□□□□ 0.26
CLDN18-203ENST00000479660 IGKV6D-41A0A0C4DH26 115 aa16.65■□□□□ 0.26
CLDN18-203ENST00000479660 MPHOSPH10O00566 681 aaKnown RBP16.65■□□□□ 0.26
CLDN18-203ENST00000479660 STK38Q15208 465 aa16.65■□□□□ 0.26
CLDN18-203ENST00000479660 ANO1Q5XXA6 986 aa16.65■□□□□ 0.26
CLDN18-203ENST00000479660 NOSTRINQ8IVI9 506 aa16.65■□□□□ 0.26
CLDN18-203ENST00000479660 CLRN2A0PK11 232 aa16.64■□□□□ 0.25
CLDN18-203ENST00000479660 YEATS4O95619 227 aa16.64■□□□□ 0.25
CLDN18-203ENST00000479660 TTLL1O95922 423 aa16.64■□□□□ 0.25
CLDN18-203ENST00000479660 PARP1P09874 1014 aaKnown RBP16.64■□□□□ 0.25
CLDN18-203ENST00000479660 SCG2P13521 617 aa16.64■□□□□ 0.25
CLDN18-203ENST00000479660 LIG1P18858 919 aa16.64■□□□□ 0.25
CLDN18-203ENST00000479660 ME1P48163 572 aa16.64■□□□□ 0.25
CLDN18-203ENST00000479660 NASPP49321 788 aaPredicted RBP16.64■□□□□ 0.25
CLDN18-203ENST00000479660 EIF6P56537 245 aaKnown RBP16.64■□□□□ 0.25
CLDN18-203ENST00000479660 SF3A1Q15459 793 aaKnown RBP16.64■□□□□ 0.25
CLDN18-203ENST00000479660 PFKFB3Q16875 520 aaPredicted RBP16.64■□□□□ 0.25
CLDN18-203ENST00000479660 NLGN2Q8NFZ4 835 aa16.64■□□□□ 0.25
CLDN18-203ENST00000479660 SHISA4Q96DD7 197 aa16.64■□□□□ 0.25
CLDN18-203ENST00000479660 LZTS2Q9BRK4 669 aa16.64■□□□□ 0.25
CLDN18-203ENST00000479660 FAM196BA6NMK8 535 aa16.63■□□□□ 0.25
CLDN18-203ENST00000479660 TCP10L2B9ZVM9 353 aa16.63■□□□□ 0.25
CLDN18-203ENST00000479660 GOLGA8HP0CJ92 632 aa16.63■□□□□ 0.25
CLDN18-203ENST00000479660 TNIP1Q15025 636 aa16.63■□□□□ 0.25
CLDN18-203ENST00000479660 CERKLQ49MI3 558 aaPredicted RBP16.63■□□□□ 0.25
CLDN18-203ENST00000479660 LRSAM1Q6UWE0 723 aa16.63■□□□□ 0.25
CLDN18-203ENST00000479660 KCNG4Q8TDN1 519 aa16.63■□□□□ 0.25
CLDN18-203ENST00000479660 PHF20Q9BVI0 1012 aa16.63■□□□□ 0.25
CLDN18-203ENST00000479660 ZNF70Q9UC06 446 aaPredicted RBP16.63■□□□□ 0.25
CLDN18-203ENST00000479660 CLIP2Q9UDT6 1046 aa16.63■□□□□ 0.25
CLDN18-203ENST00000479660 ATRNL1Q5VV63 1379 aa16.63■□□□□ 0.25
CLDN18-203ENST00000479660 KLRF2D3W0D1 207 aa16.63■□□□□ 0.25
CLDN18-203ENST00000479660 NR5A1Q13285 461 aa16.63■□□□□ 0.25
CLDN18-203ENST00000479660 USP17L2Q6R6M4 530 aa16.63■□□□□ 0.25
CLDN18-203ENST00000479660 RASGRP2Q7LDG7 609 aa16.63■□□□□ 0.25
CLDN18-203ENST00000479660 CLEC10AQ8IUN9 316 aa16.63■□□□□ 0.25
CLDN18-203ENST00000479660 MTMR14Q8NCE2 650 aa16.63■□□□□ 0.25
CLDN18-203ENST00000479660 LTBP3Q9NS15 1303 aa16.63■□□□□ 0.25
CLDN18-203ENST00000479660 SPTLC2O15270 562 aa16.62■□□□□ 0.25
CLDN18-203ENST00000479660 CYTH3O43739 400 aa16.62■□□□□ 0.25
CLDN18-203ENST00000479660 LETM1O95202 739 aaPredicted RBP16.62■□□□□ 0.25
CLDN18-203ENST00000479660 MRE11P49959 708 aa16.62■□□□□ 0.25
CLDN18-203ENST00000479660 SPDYE2Q495Y8 402 aa16.62■□□□□ 0.25
CLDN18-203ENST00000479660 LRRC47Q8N1G4 583 aaKnown RBP16.62■□□□□ 0.25
CLDN18-203ENST00000479660 OXER1Q8TDS5 423 aa16.62■□□□□ 0.25
CLDN18-203ENST00000479660 CSRNP1Q96S65 589 aa16.62■□□□□ 0.25
CLDN18-203ENST00000479660 GRPEL1Q9HAV7 217 aa16.62■□□□□ 0.25
CLDN18-203ENST00000479660 PCDHA7Q9UN72 937 aa16.62■□□□□ 0.25
CLDN18-203ENST00000479660 USP17L5A8MUK1 530 aa16.62■□□□□ 0.25
CLDN18-203ENST00000479660 VEGFAP15692 232 aaPredicted RBP16.62■□□□□ 0.25
CLDN18-203ENST00000479660 KRT2P35908 639 aa16.62■□□□□ 0.25
CLDN18-203ENST00000479660 RASSF7Q02833 373 aa16.62■□□□□ 0.25
CLDN18-203ENST00000479660 PPP4R3BQ5MIZ7 849 aa16.62■□□□□ 0.25
CLDN18-203ENST00000479660 TATDN1Q6P1N9 297 aa16.62■□□□□ 0.25
CLDN18-203ENST00000479660 METTL16Q86W50 562 aaKnown RBP16.62■□□□□ 0.25
CLDN18-203ENST00000479660 VEZTQ9HBM0 779 aa16.62■□□□□ 0.25
CLDN18-203ENST00000479660 BRMS1Q9HCU9 246 aa16.62■□□□□ 0.25
CLDN18-203ENST00000479660 DACT1Q9NYF0 836 aa16.62■□□□□ 0.25
CLDN18-203ENST00000479660 SIPA1L1O43166 1804 aa16.61■□□□□ 0.25
CLDN18-203ENST00000479660 MYO1BO43795 1136 aa16.61■□□□□ 0.25
CLDN18-203ENST00000479660 PDHBP11177 359 aa16.61■□□□□ 0.25
CLDN18-203ENST00000479660 ATP2B2Q01814 1243 aa16.61■□□□□ 0.25
CLDN18-203ENST00000479660 SLC39A14Q15043 492 aa16.61■□□□□ 0.25
CLDN18-203ENST00000479660 SLC35G1Q2M3R5 365 aa16.61■□□□□ 0.25
CLDN18-203ENST00000479660 ADALQ6DHV7 355 aa16.61■□□□□ 0.25
CLDN18-203ENST00000479660 CCAR1Q8IX12 1150 aaKnown RBP16.61■□□□□ 0.25
CLDN18-203ENST00000479660 SPON1Q9HCB6 807 aa16.61■□□□□ 0.25
CLDN18-203ENST00000479660 NR1I2O75469 434 aa16.6■□□□□ 0.25
CLDN18-203ENST00000479660 NLRP5P59047 1200 aa16.6■□□□□ 0.25
CLDN18-203ENST00000479660 RILPL1Q5EBL4 403 aa16.6■□□□□ 0.25
CLDN18-203ENST00000479660 FAM151AQ8WW52 585 aa16.6■□□□□ 0.25
CLDN18-203ENST00000479660 SPZ1Q9BXG8 430 aa16.6■□□□□ 0.25
CLDN18-203ENST00000479660 COL2A1P02458 1487 aaPredicted RBP16.6■□□□□ 0.25
CLDN18-203ENST00000479660 WNT10BO00744 389 aa16.6■□□□□ 0.25
CLDN18-203ENST00000479660 XRCC6P12956 609 aaKnown RBP eCLIP16.6■□□□□ 0.25
CLDN18-203ENST00000479660 CPVLQ9H3G5 476 aa16.6■□□□□ 0.25
CLDN18-203ENST00000479660 CABP5Q9NP86 173 aa16.6■□□□□ 0.25
CLDN18-203ENST00000479660 MYOZ2Q9NPC6 264 aa16.6■□□□□ 0.25
CLDN18-203ENST00000479660 DDX19AQ9NUU7 478 aaKnown RBP16.6■□□□□ 0.25
CLDN18-203ENST00000479660 SMARCA1P28370 1054 aa16.59■□□□□ 0.25
CLDN18-203ENST00000479660 TOB1P50616 345 aaPredicted RBP16.59■□□□□ 0.25
CLDN18-203ENST00000479660 FKBP1CQ5VVH2 108 aa16.59■□□□□ 0.25
CLDN18-203ENST00000479660 ZBED3Q96IU2 234 aaPredicted RBP16.59■□□□□ 0.25
CLDN18-203ENST00000479660 NUP62CLQ9H1M0 184 aa16.59■□□□□ 0.25
CLDN18-203ENST00000479660 KANSL2Q9H9L4 492 aa16.59■□□□□ 0.25
CLDN18-203ENST00000479660 SH3GLB2Q9NR46 395 aa16.59■□□□□ 0.25
CLDN18-203ENST00000479660 SHTN1A0MZ66 631 aa16.58■□□□□ 0.25
CLDN18-203ENST00000479660 SNHG28P0DPA3 235 aa16.58■□□□□ 0.25
CLDN18-203ENST00000479660 RPS12P25398 132 aaKnown RBP16.58■□□□□ 0.25
CLDN18-203ENST00000479660 MARCKSP29966 332 aaPredicted RBP16.58■□□□□ 0.25
CLDN18-203ENST00000479660 MMP14P50281 582 aa16.58■□□□□ 0.25
CLDN18-203ENST00000479660 PRELPP51888 382 aa16.58■□□□□ 0.25
CLDN18-203ENST00000479660 PTPAQ15257 358 aa16.58■□□□□ 0.25
CLDN18-203ENST00000479660 NPY5RQ15761 445 aa16.58■□□□□ 0.25
CLDN18-203ENST00000479660 ABCB5Q2M3G0 1257 aa16.58■□□□□ 0.25
CLDN18-203ENST00000479660 SHROOM1Q2M3G4 852 aaPredicted RBP16.58■□□□□ 0.25
CLDN18-203ENST00000479660 NBPF9Q3BBW0 867 aa16.58■□□□□ 0.25
CLDN18-203ENST00000479660 ASPRV1Q53RT3 343 aa16.58■□□□□ 0.25
CLDN18-203ENST00000479660 TMEM179Q6ZVK1 233 aa16.58■□□□□ 0.25
CLDN18-203ENST00000479660 GPKOWQ92917 476 aaPredicted RBP eCLIP16.58■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms