RNA–Protein interactions for RNA: ENST00000479542.1

ABCF1-206, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 2

Gene ABCF1, Length 893 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-206ENST00000479542 ARRDC4Q8NCT1 418 aa16.1■□□□□ 0.17
ABCF1-206ENST00000479542 NPLOC4Q8TAT6 608 aa16.1■□□□□ 0.17
ABCF1-206ENST00000479542 MOV10L1Q9BXT6 1211 aaKnown RBP16.1■□□□□ 0.17
ABCF1-206ENST00000479542 SPATC1LQ9H0A9 340 aa16.1■□□□□ 0.17
ABCF1-206ENST00000479542 MROH8Q9H579 483 aa16.1■□□□□ 0.17
ABCF1-206ENST00000479542 MCM9Q9NXL9 1143 aa16.1■□□□□ 0.17
ABCF1-206ENST00000479542 EXOC6BQ9Y2D4 811 aa16.1■□□□□ 0.17
ABCF1-206ENST00000479542 TMX2Q9Y320 296 aa16.1■□□□□ 0.17
ABCF1-206ENST00000479542 A0A0C4DFX4 3053 aa16.1■□□□□ 0.17
ABCF1-206ENST00000479542 DLL1O00548 723 aa16.09■□□□□ 0.17
ABCF1-206ENST00000479542 RAB11FIP3O75154 756 aa16.09■□□□□ 0.17
ABCF1-206ENST00000479542 HMMRO75330 724 aa16.09■□□□□ 0.17
ABCF1-206ENST00000479542 DSG3P32926 999 aa16.09■□□□□ 0.17
ABCF1-206ENST00000479542 C1orf53Q5VUE5 145 aa16.09■□□□□ 0.17
ABCF1-206ENST00000479542 SENP6Q9GZR1 1112 aaPredicted RBP16.09■□□□□ 0.17
ABCF1-206ENST00000479542 SH2D4AQ9H788 454 aa16.09■□□□□ 0.17
ABCF1-206ENST00000479542 NRBP1Q9UHY1 535 aa16.09■□□□□ 0.17
ABCF1-206ENST00000479542 NDUFB9Q9Y6M9 179 aa16.09■□□□□ 0.17
ABCF1-206ENST00000479542 ZNF532Q9HCE3 1301 aa16.09■□□□□ 0.17
ABCF1-206ENST00000479542 SEPT4O43236 478 aa16.08■□□□□ 0.16
ABCF1-206ENST00000479542 ADORA2AP29274 412 aa16.08■□□□□ 0.16
ABCF1-206ENST00000479542 HNRNPUQ00839 825 aaKnown RBP eCLIP16.08■□□□□ 0.16
ABCF1-206ENST00000479542 DPP9Q86TI2 863 aa16.08■□□□□ 0.16
ABCF1-206ENST00000479542 SIAH1Q8IUQ4 282 aa16.08■□□□□ 0.16
ABCF1-206ENST00000479542 CHMP4BQ9H444 224 aaKnown RBP16.08■□□□□ 0.16
ABCF1-206ENST00000479542 ADAMTS5Q9UNA0 930 aa16.08■□□□□ 0.16
ABCF1-206ENST00000479542 FRMPD3Q5JV73 1810 aa16.08■□□□□ 0.16
ABCF1-206ENST00000479542 RLFQ13129 1914 aa16.07■□□□□ 0.16
ABCF1-206ENST00000479542 SLC25A27O95847 323 aa16.07■□□□□ 0.16
ABCF1-206ENST00000479542 ERCC3P19447 782 aa16.07■□□□□ 0.16
ABCF1-206ENST00000479542 CYP2C19P33261 490 aa16.07■□□□□ 0.16
ABCF1-206ENST00000479542 SNX17Q15036 470 aa16.07■□□□□ 0.16
ABCF1-206ENST00000479542 WDR78Q5VTH9 848 aa16.07■□□□□ 0.16
ABCF1-206ENST00000479542 TRPV1Q8NER1 839 aa16.07■□□□□ 0.16
ABCF1-206ENST00000479542 ARHGEF10LQ9HCE6 1279 aa16.07■□□□□ 0.16
ABCF1-206ENST00000479542 DIS3Q9Y2L1 958 aaKnown RBP16.07■□□□□ 0.16
ABCF1-206ENST00000479542 DNAH12Q6ZR08 3092 aa16.07■□□□□ 0.16
ABCF1-206ENST00000479542 WDR46O15213 610 aaKnown RBP16.06■□□□□ 0.16
ABCF1-206ENST00000479542 IFIT2P09913 472 aaKnown RBP16.06■□□□□ 0.16
ABCF1-206ENST00000479542 ATP5JP18859 108 aa16.06■□□□□ 0.16
ABCF1-206ENST00000479542 ADD2P35612 726 aa16.06■□□□□ 0.16
ABCF1-206ENST00000479542 LBHD1Q9BQE6 289 aaPredicted RBP16.06■□□□□ 0.16
ABCF1-206ENST00000479542 VCPKMTQ9H867 229 aa16.06■□□□□ 0.16
ABCF1-206ENST00000479542 IL1RAPL2Q9NP60 686 aa16.06■□□□□ 0.16
ABCF1-206ENST00000479542 ZBTB40Q9NUA8 1239 aa16.06■□□□□ 0.16
ABCF1-206ENST00000479542 DDX19BQ9UMR2 479 aa16.06■□□□□ 0.16
ABCF1-206ENST00000479542 A0A0G2JMZ2 1700 aa16.05■□□□□ 0.16
ABCF1-206ENST00000479542 ZBED9Q6R2W3 1325 aa16.05■□□□□ 0.16
ABCF1-206ENST00000479542 GOLIM4O00461 696 aa16.05■□□□□ 0.16
ABCF1-206ENST00000479542 COBLO75128 1261 aa16.05■□□□□ 0.16
ABCF1-206ENST00000479542 CNGA1P29973 690 aa16.05■□□□□ 0.16
ABCF1-206ENST00000479542 UBE3CQ15386 1083 aa16.05■□□□□ 0.16
ABCF1-206ENST00000479542 C12orf60Q5U649 245 aa16.05■□□□□ 0.16
ABCF1-206ENST00000479542 SLC39A5Q6ZMH5 540 aa16.05■□□□□ 0.16
ABCF1-206ENST00000479542 LCORLQ8N3X6 602 aa16.05■□□□□ 0.16
ABCF1-206ENST00000479542 SDR42E1Q8WUS8 393 aa16.05■□□□□ 0.16
ABCF1-206ENST00000479542 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.05■□□□□ 0.163e-6■□□□□ 8.5
ABCF1-206ENST00000479542 PRKAG2Q9UGJ0 569 aa16.05■□□□□ 0.16
ABCF1-206ENST00000479542 NAV1Q8NEY1 1877 aa16.04■□□□□ 0.16
ABCF1-206ENST00000479542 MPHOSPH10O00566 681 aaKnown RBP16.04■□□□□ 0.16
ABCF1-206ENST00000479542 COPB2P35606 906 aa16.04■□□□□ 0.16
ABCF1-206ENST00000479542 MDM2Q00987 491 aaPredicted RBP16.04■□□□□ 0.16
ABCF1-206ENST00000479542 C16orf86Q6ZW13 317 aa16.04■□□□□ 0.16
ABCF1-206ENST00000479542 AMOTL1Q8IY63 956 aa16.04■□□□□ 0.16
ABCF1-206ENST00000479542 PANK1Q8TE04 598 aa16.04■□□□□ 0.16
ABCF1-206ENST00000479542 TANGO6Q9C0B7 1094 aa16.04■□□□□ 0.16
ABCF1-206ENST00000479542 KANSL2Q9H9L4 492 aa16.04■□□□□ 0.16
ABCF1-206ENST00000479542 PAG1Q9NWQ8 432 aa16.04■□□□□ 0.16
ABCF1-206ENST00000479542 KBTBD13C9JR72 458 aa16.03■□□□□ 0.16
ABCF1-206ENST00000479542 FLOT1O75955 427 aa16.03■□□□□ 0.16
ABCF1-206ENST00000479542 FCER1AP12319 257 aa16.03■□□□□ 0.16
ABCF1-206ENST00000479542 CDK8P49336 464 aa16.03■□□□□ 0.16
ABCF1-206ENST00000479542 RTP1P59025 263 aa16.03■□□□□ 0.16
ABCF1-206ENST00000479542 ICA1Q05084 483 aa16.03■□□□□ 0.16
ABCF1-206ENST00000479542 KIAA1755Q5JYT7 1200 aa16.03■□□□□ 0.16
ABCF1-206ENST00000479542 RIOX2Q8IUF8 465 aa16.03■□□□□ 0.16
ABCF1-206ENST00000479542 SIRT2Q8IXJ6 389 aa16.03■□□□□ 0.16
ABCF1-206ENST00000479542 MAML3Q96JK9 1138 aa16.03■□□□□ 0.16
ABCF1-206ENST00000479542 HAUS7Q99871 368 aa16.03■□□□□ 0.16
ABCF1-206ENST00000479542 ROBO3Q96MS0 1386 aa16.02■□□□□ 0.16
ABCF1-206ENST00000479542 ZSCAN25Q6NSZ9 544 aa16.02■□□□□ 0.16
ABCF1-206ENST00000479542 Q7L0L9 218 aa16.02■□□□□ 0.16
ABCF1-206ENST00000479542 MSL3Q8N5Y2 521 aaKnown RBP16.02■□□□□ 0.16
ABCF1-206ENST00000479542 DDRGK1Q96HY6 314 aa16.02■□□□□ 0.16
ABCF1-206ENST00000479542 DNAJC2Q99543 621 aaKnown RBP16.02■□□□□ 0.16
ABCF1-206ENST00000479542 ARMT1Q9H993 441 aa16.02■□□□□ 0.16
ABCF1-206ENST00000479542 USP17L12C9JPN9 530 aa16.01■□□□□ 0.15
ABCF1-206ENST00000479542 USP17L21D6R901 530 aa16.01■□□□□ 0.15
ABCF1-206ENST00000479542 AKR1B1P15121 316 aa16.01■□□□□ 0.15
ABCF1-206ENST00000479542 ATN1P54259 1190 aaPredicted RBP16.01■□□□□ 0.15
ABCF1-206ENST00000479542 EVX2Q03828 476 aa16.01■□□□□ 0.15
ABCF1-206ENST00000479542 TMEM132BQ14DG7 1078 aa16.01■□□□□ 0.15
ABCF1-206ENST00000479542 GJC2Q5T442 439 aaPredicted RBP16.01■□□□□ 0.15
ABCF1-206ENST00000479542 GIMAP6Q6P9H5 292 aa16.01■□□□□ 0.15
ABCF1-206ENST00000479542 NCAPG2Q86XI2 1143 aa16.01■□□□□ 0.15
ABCF1-206ENST00000479542 SLC44A5Q8NCS7 719 aa16.01■□□□□ 0.15
ABCF1-206ENST00000479542 ATG4CQ96DT6 458 aa16.01■□□□□ 0.15
ABCF1-206ENST00000479542 MBD4O95243 580 aa16■□□□□ 0.15
ABCF1-206ENST00000479542 CYP2D6P10635 497 aa16■□□□□ 0.15
ABCF1-206ENST00000479542 LRRC41Q15345 812 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms