RNA–Protein interactions for RNA: ENST00000479485.5

SSR1-207, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 2

Gene SSR1, Length 640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-207ENST00000479485 LRRC4CQ9HCJ2 640 aa6.95□□□□□ -1.3
SSR1-207ENST00000479485 PRDM5Q9NQX1 630 aaPredicted RBP6.95□□□□□ -1.3
SSR1-207ENST00000479485 U3KQE9 123 aa6.95□□□□□ -1.3
SSR1-207ENST00000479485 NCANO14594 1321 aa6.95□□□□□ -1.3
SSR1-207ENST00000479485 RBAK-RBAKDNI3L0D1 243 aa6.94□□□□□ -1.3
SSR1-207ENST00000479485 UBOX5O94941 541 aa6.94□□□□□ -1.3
SSR1-207ENST00000479485 HOXA10P31260 410 aaPredicted RBP6.94□□□□□ -1.3
SSR1-207ENST00000479485 ETV3P41162 512 aa6.94□□□□□ -1.3
SSR1-207ENST00000479485 ZNF746Q6NUN9 644 aaPredicted RBP6.94□□□□□ -1.3
SSR1-207ENST00000479485 TAB3Q8N5C8 712 aaPredicted RBP6.94□□□□□ -1.3
SSR1-207ENST00000479485 FAM181AQ8N9Y4 354 aa6.94□□□□□ -1.3
SSR1-207ENST00000479485 HEXIM2Q96MH2 286 aaKnown RBP6.94□□□□□ -1.3
SSR1-207ENST00000479485 GTF2IRD1Q9UHL9 959 aa6.94□□□□□ -1.3
SSR1-207ENST00000479485 CEP131Q9UPN4 1083 aa6.94□□□□□ -1.3
SSR1-207ENST00000479485 MAPK8IP1Q9UQF2 711 aa6.94□□□□□ -1.3
SSR1-207ENST00000479485 LEMD3Q9Y2U8 911 aa6.94□□□□□ -1.3
SSR1-207ENST00000479485 PRRG2O14669 202 aa6.93□□□□□ -1.3
SSR1-207ENST00000479485 ETFBP38117 255 aa6.93□□□□□ -1.3
SSR1-207ENST00000479485 ZYXQ15942 572 aaKnown RBP6.93□□□□□ -1.3
SSR1-207ENST00000479485 FAM214BQ7L5A3 538 aa6.93□□□□□ -1.3
SSR1-207ENST00000479485 PIM2Q9P1W9 311 aa6.93□□□□□ -1.3
SSR1-207ENST00000479485 CNTNAP4Q9C0A0 1308 aa6.93□□□□□ -1.3
SSR1-207ENST00000479485 SMAD7O15105 426 aaKnown RBP6.92□□□□□ -1.3
SSR1-207ENST00000479485 ITIH2P19823 946 aa6.92□□□□□ -1.3
SSR1-207ENST00000479485 ATP2B1P20020 1258 aa6.92□□□□□ -1.3
SSR1-207ENST00000479485 CCNFP41002 786 aa6.92□□□□□ -1.3
SSR1-207ENST00000479485 CHMP4BP1P59074 171 aa6.92□□□□□ -1.3
SSR1-207ENST00000479485 PPP2R5EQ16537 467 aa6.92□□□□□ -1.3
SSR1-207ENST00000479485 SFRP5Q5T4F7 317 aa6.92□□□□□ -1.3
SSR1-207ENST00000479485 ARHGAP27Q6ZUM4 889 aa6.92□□□□□ -1.3
SSR1-207ENST00000479485 TTC6Q86TZ1 520 aa6.92□□□□□ -1.3
SSR1-207ENST00000479485 C19orf47Q8N9M1 422 aaKnown RBP6.92□□□□□ -1.3
SSR1-207ENST00000479485 KREMEN1Q96MU8 473 aa6.92□□□□□ -1.3
SSR1-207ENST00000479485 SLC6A18Q96N87 628 aa6.92□□□□□ -1.3
SSR1-207ENST00000479485 PRKAG3Q9UGI9 489 aa6.92□□□□□ -1.3
SSR1-207ENST00000479485 PRR33A8MZF0 331 aa6.91□□□□□ -1.3
SSR1-207ENST00000479485 CYP26A1O43174 497 aa6.91□□□□□ -1.3
SSR1-207ENST00000479485 GTF2F1P35269 517 aaKnown RBP eCLIP6.91□□□□□ -1.3
SSR1-207ENST00000479485 INTS3Q68E01 1043 aaKnown RBP6.91□□□□□ -1.3
SSR1-207ENST00000479485 UNC5AQ6ZN44 842 aa6.91□□□□□ -1.3
SSR1-207ENST00000479485 TMEM192Q8IY95 271 aa6.91□□□□□ -1.3
SSR1-207ENST00000479485 RNF141Q8WVD5 230 aa6.91□□□□□ -1.3
SSR1-207ENST00000479485 ZNF512BQ96KM6 892 aaPredicted RBP6.91□□□□□ -1.3
SSR1-207ENST00000479485 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.91□□□□□ -1.3
SSR1-207ENST00000479485 A0A1W2PQH9 124 aa6.9□□□□□ -1.3
SSR1-207ENST00000479485 GNAT3A8MTJ3 354 aa6.9□□□□□ -1.3
SSR1-207ENST00000479485 IGF2BP3O00425 579 aaKnown RBP eCLIP6.9□□□□□ -1.3
SSR1-207ENST00000479485 CLEC3AO75596 197 aa6.9□□□□□ -1.3
SSR1-207ENST00000479485 STK10O94804 968 aaKnown RBP6.9□□□□□ -1.3
SSR1-207ENST00000479485 CBX7O95931 251 aa6.9□□□□□ -1.3
SSR1-207ENST00000479485 CEACAM5P06731 702 aa6.9□□□□□ -1.3
SSR1-207ENST00000479485 FOSL1P15407 271 aa6.9□□□□□ -1.3
SSR1-207ENST00000479485 CYP7A1P22680 504 aa6.9□□□□□ -1.3
SSR1-207ENST00000479485 BUD31P41223 144 aaPredicted RBP6.9□□□□□ -1.3
SSR1-207ENST00000479485 OXCT1P55809 520 aa6.9□□□□□ -1.3
SSR1-207ENST00000479485 TNNI3KQ59H18 835 aa6.9□□□□□ -1.3
SSR1-207ENST00000479485 NFXL1Q6ZNB6 911 aa6.9□□□□□ -1.3
SSR1-207ENST00000479485 MFSD4AQ8N468 514 aa6.9□□□□□ -1.3
SSR1-207ENST00000479485 HNRNPLLQ8WVV9 542 aaKnown RBP6.9□□□□□ -1.3
SSR1-207ENST00000479485 DHX38Q92620 1227 aaKnown RBP6.9□□□□□ -1.3
SSR1-207ENST00000479485 ASPNQ9BXN1 380 aa6.9□□□□□ -1.3
SSR1-207ENST00000479485 TNKS2Q9H2K2 1166 aa6.9□□□□□ -1.3
SSR1-207ENST00000479485 ACTR10Q9NZ32 417 aa6.9□□□□□ -1.3
SSR1-207ENST00000479485 PPP1R1BQ9UD71 204 aaPredicted RBP6.9□□□□□ -1.3
SSR1-207ENST00000479485 JUNBP17275 347 aaPredicted RBP6.89□□□□□ -1.31
SSR1-207ENST00000479485 RNF4P78317 190 aa6.89□□□□□ -1.31
SSR1-207ENST00000479485 TDRD10Q5VZ19 366 aaKnown RBP6.89□□□□□ -1.31
SSR1-207ENST00000479485 C22orf34Q6ZV56 151 aa6.89□□□□□ -1.31
SSR1-207ENST00000479485 PLD6Q8N2A8 252 aaKnown RBP6.89□□□□□ -1.31
SSR1-207ENST00000479485 COX4I2Q96KJ9 171 aa6.89□□□□□ -1.31
SSR1-207ENST00000479485 Q96M66 194 aa6.89□□□□□ -1.31
SSR1-207ENST00000479485 ZC3H7BQ9UGR2 993 aaKnown RBP6.89□□□□□ -1.31
SSR1-207ENST00000479485 SLC12A7Q9Y666 1083 aa6.89□□□□□ -1.31
SSR1-207ENST00000479485 CAPN6Q9Y6Q1 641 aa6.89□□□□□ -1.31
SSR1-207ENST00000479485 LTBP3Q9NS15 1303 aa6.89□□□□□ -1.31
SSR1-207ENST00000479485 KIR3DL1P43629 444 aa6.88□□□□□ -1.31
SSR1-207ENST00000479485 CASP7P55210 303 aa6.88□□□□□ -1.31
SSR1-207ENST00000479485 LARP1BQ659C4 914 aaKnown RBP6.88□□□□□ -1.31
SSR1-207ENST00000479485 LILRA6Q6PI73 481 aa6.88□□□□□ -1.31
SSR1-207ENST00000479485 ANKS3Q6ZW76 656 aa6.88□□□□□ -1.31
SSR1-207ENST00000479485 PPFIBP1Q86W92 1011 aa6.88□□□□□ -1.31
SSR1-207ENST00000479485 DHRS1Q96LJ7 313 aa6.88□□□□□ -1.31
SSR1-207ENST00000479485 MKRN2Q9H000 416 aaKnown RBP6.88□□□□□ -1.31
SSR1-207ENST00000479485 MKNK2Q9HBH9 465 aa6.88□□□□□ -1.31
SSR1-207ENST00000479485 FAM86C1Q9NVL1 165 aa6.88□□□□□ -1.31
SSR1-207ENST00000479485 SUCOQ9UBS9 1254 aaKnown RBP6.88□□□□□ -1.31
SSR1-207ENST00000479485 FAM155AB1AL88 458 aaPredicted RBP6.87□□□□□ -1.31
SSR1-207ENST00000479485 B8ZZF3 427 aa6.87□□□□□ -1.31
SSR1-207ENST00000479485 C9IYK1 514 aa6.87□□□□□ -1.31
SSR1-207ENST00000479485 LRRN2O75325 713 aa6.87□□□□□ -1.31
SSR1-207ENST00000479485 PMS1P54277 932 aaKnown RBP6.87□□□□□ -1.31
SSR1-207ENST00000479485 MSMPQ1L6U9 139 aa6.87□□□□□ -1.31
SSR1-207ENST00000479485 NBPF12Q5TAG4 269 aaPredicted RBP6.87□□□□□ -1.31
SSR1-207ENST00000479485 SPACA3Q8IXA5 215 aa6.87□□□□□ -1.31
SSR1-207ENST00000479485 DTWD2Q8NBA8 298 aa6.87□□□□□ -1.31
SSR1-207ENST00000479485 ARMC5Q96C12 935 aa6.87□□□□□ -1.31
SSR1-207ENST00000479485 VWCEQ96DN2 955 aa6.87□□□□□ -1.31
SSR1-207ENST00000479485 DRC1Q96MC2 740 aa6.87□□□□□ -1.31
SSR1-207ENST00000479485 PHAXQ9H814 394 aaKnown RBP6.87□□□□□ -1.31
SSR1-207ENST00000479485 PCDHB10Q9UN67 800 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms