RNA–Protein interactions for RNA: ENST00000479335.5

RAD51B-208, Transcript of RAD51 paralog B, humanhuman

TSL 1 (best)

Gene RAD51B, Length 1,615 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD51B-208ENST00000479335 STX8Q9UNK0 236 aa11.35□□□□□ -0.59
RAD51B-208ENST00000479335 KCNJ14Q9UNX9 436 aa11.35□□□□□ -0.59
RAD51B-208ENST00000479335 CEP131Q9UPN4 1083 aa11.35□□□□□ -0.59
RAD51B-208ENST00000479335 IGKV6D-41A0A0C4DH26 115 aa11.35□□□□□ -0.59
RAD51B-208ENST00000479335 FAM237AA0A1B0GTK4 181 aa11.35□□□□□ -0.59
RAD51B-208ENST00000479335 UBE2Q2LH0YL09 131 aa11.35□□□□□ -0.59
RAD51B-208ENST00000479335 ENTPD3O75355 529 aa11.35□□□□□ -0.59
RAD51B-208ENST00000479335 CAVIN2O95810 425 aa11.35□□□□□ -0.59
RAD51B-208ENST00000479335 VIL1P09327 827 aaKnown RBP11.35□□□□□ -0.59
RAD51B-208ENST00000479335 CALML3P27482 149 aa11.35□□□□□ -0.59
RAD51B-208ENST00000479335 POLD1P28340 1107 aa11.35□□□□□ -0.59
RAD51B-208ENST00000479335 KRT2P35908 639 aa11.35□□□□□ -0.59
RAD51B-208ENST00000479335 MMP14P50281 582 aa11.35□□□□□ -0.59
RAD51B-208ENST00000479335 CCDC173Q0VFZ6 552 aa11.35□□□□□ -0.59
RAD51B-208ENST00000479335 PICALMQ13492 652 aa11.35□□□□□ -0.59
RAD51B-208ENST00000479335 SNW1Q13573 536 aaKnown RBP11.35□□□□□ -0.59
RAD51B-208ENST00000479335 AXDND1Q5T1B0 1012 aaPredicted RBP11.35□□□□□ -0.59
RAD51B-208ENST00000479335 GALNT17Q6IS24 598 aa11.35□□□□□ -0.59
RAD51B-208ENST00000479335 FOXP4Q8IVH2 680 aaPredicted RBP11.35□□□□□ -0.59
RAD51B-208ENST00000479335 FSIP1Q8NA03 581 aa11.35□□□□□ -0.59
RAD51B-208ENST00000479335 PPP1R9BQ96SB3 815 aa11.35□□□□□ -0.59
RAD51B-208ENST00000479335 PANK2Q9BZ23 570 aa11.35□□□□□ -0.59
RAD51B-208ENST00000479335 MTFR1LQ9H019 292 aa11.35□□□□□ -0.59
RAD51B-208ENST00000479335 MTMR4Q9NYA4 1195 aa11.35□□□□□ -0.59
RAD51B-208ENST00000479335 PI4KBQ9UBF8 816 aa11.35□□□□□ -0.59
RAD51B-208ENST00000479335 COL2A1P02458 1487 aaPredicted RBP11.34□□□□□ -0.59
RAD51B-208ENST00000479335 YDJCA8MPS7 323 aa11.34□□□□□ -0.59
RAD51B-208ENST00000479335 KINO60870 393 aaKnown RBP11.34□□□□□ -0.59
RAD51B-208ENST00000479335 CUTAO60888 179 aa11.34□□□□□ -0.59
RAD51B-208ENST00000479335 BMP15O95972 392 aa11.34□□□□□ -0.59
RAD51B-208ENST00000479335 TPRNQ4KMQ1 711 aa11.34□□□□□ -0.59
RAD51B-208ENST00000479335 RSBN1LQ6PCB5 846 aaPredicted RBP11.34□□□□□ -0.59
RAD51B-208ENST00000479335 METTL16Q86W50 562 aaKnown RBP11.34□□□□□ -0.59
RAD51B-208ENST00000479335 FMR1NBQ8N0W7 255 aaPredicted RBP11.34□□□□□ -0.59
RAD51B-208ENST00000479335 SPZ1Q9BXG8 430 aa11.34□□□□□ -0.59
RAD51B-208ENST00000479335 PARP1P09874 1014 aaKnown RBP11.33□□□□□ -0.6
RAD51B-208ENST00000479335 TRAPPC10P48553 1259 aa11.33□□□□□ -0.6
RAD51B-208ENST00000479335 RBM5P52756 815 aaKnown RBP eCLIP11.33□□□□□ -0.6
RAD51B-208ENST00000479335 LARGE2Q8N3Y3 721 aa11.33□□□□□ -0.6
RAD51B-208ENST00000479335 CEP95Q96GE4 821 aa11.33□□□□□ -0.6
RAD51B-208ENST00000479335 TIGD1Q96MW7 591 aa11.33□□□□□ -0.6
RAD51B-208ENST00000479335 GMLQ99445 158 aa11.33□□□□□ -0.6
RAD51B-208ENST00000479335 VPS54Q9P1Q0 977 aa11.33□□□□□ -0.6
RAD51B-208ENST00000479335 HDAC9Q9UKV0 1011 aa11.33□□□□□ -0.6
RAD51B-208ENST00000479335 NOL7Q9UMY1 257 aaKnown RBP11.33□□□□□ -0.6
RAD51B-208ENST00000479335 MYH8P13535 1937 aa11.33□□□□□ -0.6
RAD51B-208ENST00000479335 KLRF2D3W0D1 207 aa11.32□□□□□ -0.6
RAD51B-208ENST00000479335 TTLL1O95922 423 aa11.32□□□□□ -0.6
RAD51B-208ENST00000479335 SHMT1P34896 483 aa11.32□□□□□ -0.6
RAD51B-208ENST00000479335 TOB1P50616 345 aaPredicted RBP11.32□□□□□ -0.6
RAD51B-208ENST00000479335 NFIAQ12857 509 aa11.32□□□□□ -0.6
RAD51B-208ENST00000479335 SASS6Q6UVJ0 657 aa11.32□□□□□ -0.6
RAD51B-208ENST00000479335 STAG2Q8N3U4 1231 aa11.32□□□□□ -0.6
RAD51B-208ENST00000479335 ZNF579Q8NAF0 562 aaKnown RBP11.32□□□□□ -0.6
RAD51B-208ENST00000479335 AGBL3Q8NEM8 1001 aa11.32□□□□□ -0.6
RAD51B-208ENST00000479335 CCDC148Q8NFR7 591 aa11.32□□□□□ -0.6
RAD51B-208ENST00000479335 TNFRSF25Q93038 417 aa11.32□□□□□ -0.6
RAD51B-208ENST00000479335 GOLPH3LQ9H4A5 285 aa11.32□□□□□ -0.6
RAD51B-208ENST00000479335 FAM198AQ9UFP1 575 aa11.32□□□□□ -0.6
RAD51B-208ENST00000479335 ZNRF3Q9ULT6 936 aa11.32□□□□□ -0.6
RAD51B-208ENST00000479335 ATRNL1Q5VV63 1379 aa11.32□□□□□ -0.6
RAD51B-208ENST00000479335 hCG_1984214I3L0E3 225 aa11.31□□□□□ -0.6
RAD51B-208ENST00000479335 SNHG28P0DPA3 235 aa11.31□□□□□ -0.6
RAD51B-208ENST00000479335 PTPREP23469 700 aa11.31□□□□□ -0.6
RAD51B-208ENST00000479335 NLRP5P59047 1200 aa11.31□□□□□ -0.6
RAD51B-208ENST00000479335 NR5A1Q13285 461 aa11.31□□□□□ -0.6
RAD51B-208ENST00000479335 NPY5RQ15761 445 aa11.31□□□□□ -0.6
RAD51B-208ENST00000479335 CAMK4Q16566 473 aa11.31□□□□□ -0.6
RAD51B-208ENST00000479335 CFAP100Q494V2 611 aa11.31□□□□□ -0.6
RAD51B-208ENST00000479335 ASPRV1Q53RT3 343 aa11.31□□□□□ -0.6
RAD51B-208ENST00000479335 DALRD3Q5D0E6 543 aaKnown RBP11.31□□□□□ -0.6
RAD51B-208ENST00000479335 TATDN1Q6P1N9 297 aa11.31□□□□□ -0.6
RAD51B-208ENST00000479335 ELOA2Q8IYF1 753 aaPredicted RBP11.31□□□□□ -0.6
RAD51B-208ENST00000479335 ZNF713Q8N859 430 aaPredicted RBP11.31□□□□□ -0.6
RAD51B-208ENST00000479335 KRI1Q8N9T8 703 aaKnown RBP11.31□□□□□ -0.6
RAD51B-208ENST00000479335 MTMR14Q8NCE2 650 aa11.31□□□□□ -0.6
RAD51B-208ENST00000479335 DAGLBQ8NCG7 672 aa11.31□□□□□ -0.6
RAD51B-208ENST00000479335 OXER1Q8TDS5 423 aa11.31□□□□□ -0.6
RAD51B-208ENST00000479335 CCDC12Q8WUD4 166 aaPredicted RBP11.31□□□□□ -0.6
RAD51B-208ENST00000479335 SHISA4Q96DD7 197 aa11.31□□□□□ -0.6
RAD51B-208ENST00000479335 PDLIM2Q96JY6 352 aa11.31□□□□□ -0.6
RAD51B-208ENST00000479335 CABP5Q9NP86 173 aa11.31□□□□□ -0.6
RAD51B-208ENST00000479335 GREB1LQ9C091 1923 aaPredicted RBP11.31□□□□□ -0.6
RAD51B-208ENST00000479335 TRIM75PA6NK02 468 aa11.31□□□□□ -0.6
RAD51B-208ENST00000479335 AKR1B1P15121 316 aa11.31□□□□□ -0.6
RAD51B-208ENST00000479335 TYRO3Q06418 890 aa11.31□□□□□ -0.6
RAD51B-208ENST00000479335 FKBP1CQ5VVH2 108 aa11.31□□□□□ -0.6
RAD51B-208ENST00000479335 RESP18Q5W5W9 173 aa11.31□□□□□ -0.6
RAD51B-208ENST00000479335 NIM1KQ8IY84 436 aa11.31□□□□□ -0.6
RAD51B-208ENST00000479335 OGFOD1Q8N543 542 aa11.31□□□□□ -0.6
RAD51B-208ENST00000479335 MKL1Q969V6 931 aa11.31□□□□□ -0.6
RAD51B-208ENST00000479335 RIOX1Q9H6W3 641 aa11.31□□□□□ -0.6
RAD51B-208ENST00000479335 BARHL2Q9NY43 387 aa11.31□□□□□ -0.6
RAD51B-208ENST00000479335 TMOD2Q9NZR1 351 aa11.31□□□□□ -0.6
RAD51B-208ENST00000479335 PCDHA4Q9UN74 947 aa11.31□□□□□ -0.6
RAD51B-208ENST00000479335 HPSEQ9Y251 543 aa11.31□□□□□ -0.6
RAD51B-208ENST00000479335 CD2APQ9Y5K6 639 aa11.31□□□□□ -0.6
RAD51B-208ENST00000479335 SRPRBQ9Y5M8 271 aaKnown RBP11.31□□□□□ -0.6
RAD51B-208ENST00000479335 ADAMTSL1Q8N6G6 1762 aa11.31□□□□□ -0.6
RAD51B-208ENST00000479335 A0A1B0GVL5 298 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms