RNA–Protein interactions for RNA: ENST00000479320.5

HLA-A-206, Transcript of major histocompatibility complex, class I, A, human

Gene HLA-A, Length 1,334 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HLA-A-206	ENST00000479320	ZMYM1	Q5SVZ6	1142 aa		21.29	■■□□□ 1
HLA-A-206	ENST00000479320	CCAR1	Q8IX12	1150 aa	Known RBP	21.29	■■□□□ 1
HLA-A-206	ENST00000479320	STK11IP	Q8N1F8	1099 aa		21.29	■■□□□ 1
HLA-A-206	ENST00000479320	RWDD1	Q9H446	243 aa	Predicted RBP	21.29	■■□□□ 1
HLA-A-206	ENST00000479320	SPDYE16	A6NNV3	312 aa	Predicted RBP	21.29	■■□□□ 1
HLA-A-206	ENST00000479320	TDO2	P48775	406 aa		21.29	■■□□□ 1
HLA-A-206	ENST00000479320	COG2	Q14746	738 aa		21.29	■■□□□ 1
HLA-A-206	ENST00000479320	SMC5	Q8IY18	1101 aa		21.29	■■□□□ 1
HLA-A-206	ENST00000479320	IFNL3	Q8IZI9	196 aa		21.29	■■□□□ 1
HLA-A-206	ENST00000479320	NUDT12	Q9BQG2	462 aa		21.29	■■□□□ 1
HLA-A-206	ENST00000479320	KANSL2	Q9H9L4	492 aa		21.29	■■□□□ 1
HLA-A-206	ENST00000479320	BTBD7	Q9P203	1132 aa		21.29	■■□□□ 1
HLA-A-206	ENST00000479320	PCDH10	Q9P2E7	1040 aa		21.29	■■□□□ 1
HLA-A-206	ENST00000479320	RLF	Q13129	1914 aa		21.28	■■□□□ 1
HLA-A-206	ENST00000479320	IGHD	P01880	384 aa		21.28	■■□□□ 1
HLA-A-206	ENST00000479320	EEF2	P13639	858 aa	Known RBP	21.28	■■□□□ 1
HLA-A-206	ENST00000479320	CYP2B6	P20813	491 aa		21.28	■■□□□ 1
HLA-A-206	ENST00000479320	RASA1	P20936	1047 aa		21.28	■■□□□ 1
HLA-A-206	ENST00000479320	GPR142	Q7Z601	462 aa		21.28	■■□□□ 1
HLA-A-206	ENST00000479320	PLEKHH3	Q7Z736	793 aa		21.28	■■□□□ 1
HLA-A-206	ENST00000479320	U2AF1L4	Q8WU68	220 aa	Known RBP	21.28	■■□□□ 1
HLA-A-206	ENST00000479320	LPAR1	Q92633	364 aa		21.28	■■□□□ 1
HLA-A-206	ENST00000479320	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	21.28	■■□□□ 1
HLA-A-206	ENST00000479320	TANGO6	Q9C0B7	1094 aa		21.28	■■□□□ 1
HLA-A-206	ENST00000479320	SH2D4A	Q9H788	454 aa		21.28	■■□□□ 1
HLA-A-206	ENST00000479320	VCPKMT	Q9H867	229 aa		21.28	■■□□□ 1
HLA-A-206	ENST00000479320	MKNK2	Q9HBH9	465 aa		21.28	■■□□□ 1
HLA-A-206	ENST00000479320	TSHZ2	Q9NRE2	1034 aa		21.28	■■□□□ 1
HLA-A-206	ENST00000479320	HOXC10	Q9NYD6	342 aa		21.28	■■□□□ 1
HLA-A-206	ENST00000479320	ROBO3	Q96MS0	1386 aa		21.27	■■□□□ 1
HLA-A-206	ENST00000479320	SGPL1	O95470	568 aa		21.27	■□□□□ 0.99
HLA-A-206	ENST00000479320	HMGCR	P04035	888 aa		21.27	■□□□□ 0.99
HLA-A-206	ENST00000479320	CCNA1	P78396	465 aa		21.27	■□□□□ 0.99
HLA-A-206	ENST00000479320	ATP2B2	Q01814	1243 aa		21.27	■□□□□ 0.99
HLA-A-206	ENST00000479320	SPICE1	Q8N0Z3	855 aa		21.27	■□□□□ 0.99
HLA-A-206	ENST00000479320	SOCS4	Q8WXH5	440 aa		21.27	■□□□□ 0.99
HLA-A-206	ENST00000479320	USP6NL	Q92738	828 aa		21.27	■□□□□ 0.99
HLA-A-206	ENST00000479320	EVI5L	Q96CN4	794 aa		21.27	■□□□□ 0.99
HLA-A-206	ENST00000479320	LNPK	Q9C0E8	428 aa		21.27	■□□□□ 0.99
HLA-A-206	ENST00000479320	GREB1L	Q9C091	1923 aa	Predicted RBP	21.26	■□□□□ 0.99
HLA-A-206	ENST00000479320	XRCC5	P13010	732 aa	Known RBP	21.26	■□□□□ 0.99
HLA-A-206	ENST00000479320	TRIM32	Q13049	653 aa		21.26	■□□□□ 0.99
HLA-A-206	ENST00000479320	MORN1	Q5T089	497 aa		21.26	■□□□□ 0.99
HLA-A-206	ENST00000479320	B4GALNT3	Q6L9W6	998 aa		21.26	■□□□□ 0.99
HLA-A-206	ENST00000479320	TRIB2	Q92519	343 aa		21.26	■□□□□ 0.99
HLA-A-206	ENST00000479320	NACAP1	Q9BZK3	213 aa		21.26	■□□□□ 0.99
HLA-A-206	ENST00000479320	PAK6	Q9NQU5	681 aa	Predicted RBP	21.26	■□□□□ 0.99
HLA-A-206	ENST00000479320	DEFB118	Q96PH6	123 aa		21.25	■□□□□ 0.99
HLA-A-206	ENST00000479320	CWC22	Q9HCG8	908 aa	Known RBP	21.25	■□□□□ 0.99
HLA-A-206	ENST00000479320	DSG3	P32926	999 aa		21.24	■□□□□ 0.99
HLA-A-206	ENST00000479320	CCDC129	Q6ZRS4	1044 aa		21.24	■□□□□ 0.99
HLA-A-206	ENST00000479320	RPTOR	Q8N122	1335 aa		21.23	■□□□□ 0.99
HLA-A-206	ENST00000479320	PARP14	Q460N5	1801 aa		21.23	■□□□□ 0.99
HLA-A-206	ENST00000479320	WDR46	O15213	610 aa	Known RBP	21.23	■□□□□ 0.99
HLA-A-206	ENST00000479320	PRDM1	O75626	825 aa		21.23	■□□□□ 0.99
HLA-A-206	ENST00000479320	FLOT1	O75955	427 aa		21.23	■□□□□ 0.99
HLA-A-206	ENST00000479320	RGS2	P41220	211 aa		21.23	■□□□□ 0.99
HLA-A-206	ENST00000479320	WDR78	Q5VTH9	848 aa		21.23	■□□□□ 0.99
HLA-A-206	ENST00000479320	UBE2Q1	Q7Z7E8	422 aa		21.23	■□□□□ 0.99
HLA-A-206	ENST00000479320	ZNF444	Q8N0Y2	327 aa	Predicted RBP	21.23	■□□□□ 0.99
HLA-A-206	ENST00000479320	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	21.23	■□□□□ 0.99
HLA-A-206	ENST00000479320	NAPB	Q9H115	298 aa		21.23	■□□□□ 0.99
HLA-A-206	ENST00000479320	ZNF287	Q9HBT7	754 aa		21.23	■□□□□ 0.99
HLA-A-206	ENST00000479320	FOXP2	O15409	715 aa		21.22	■□□□□ 0.99
HLA-A-206	ENST00000479320	TFRC	P02786	760 aa	Known RBP	21.22	■□□□□ 0.99
HLA-A-206	ENST00000479320	PTPRE	P23469	700 aa		21.22	■□□□□ 0.99
HLA-A-206	ENST00000479320	MAP2K5	Q13163	448 aa		21.22	■□□□□ 0.99
HLA-A-206	ENST00000479320	CHD1L	Q86WJ1	897 aa		21.22	■□□□□ 0.99
HLA-A-206	ENST00000479320	TRMT44	Q8IYL2	757 aa	Known RBP	21.22	■□□□□ 0.99
HLA-A-206	ENST00000479320	MOV10L1	Q9BXT6	1211 aa	Known RBP	21.22	■□□□□ 0.99
HLA-A-206	ENST00000479320	GOPC	Q9HD26	462 aa		21.22	■□□□□ 0.99
HLA-A-206	ENST00000479320	HMX1	Q9NP08	348 aa	Predicted RBP	21.22	■□□□□ 0.99
HLA-A-206	ENST00000479320	NYAP2	Q9P242	653 aa		21.22	■□□□□ 0.99
HLA-A-206	ENST00000479320		A0A0G2JMZ2	1700 aa		21.22	■□□□□ 0.99
HLA-A-206	ENST00000479320	SLC15A5	A6NIM6	579 aa		21.21	■□□□□ 0.99
HLA-A-206	ENST00000479320	CAPN2	P17655	700 aa		21.21	■□□□□ 0.99
HLA-A-206	ENST00000479320	NUCB1	Q02818	461 aa		21.21	■□□□□ 0.99
HLA-A-206	ENST00000479320	CCL14	Q16627	93 aa		21.21	■□□□□ 0.99
HLA-A-206	ENST00000479320	MAP3K21	Q5TCX8	1036 aa		21.21	■□□□□ 0.99
HLA-A-206	ENST00000479320	MB21D1	Q8N884	522 aa		21.21	■□□□□ 0.99
HLA-A-206	ENST00000479320	ATG4C	Q96DT6	458 aa		21.21	■□□□□ 0.99
HLA-A-206	ENST00000479320	SPATC1L	Q9H0A9	340 aa		21.21	■□□□□ 0.99
HLA-A-206	ENST00000479320	CRISPLD2	Q9H0B8	497 aa		21.21	■□□□□ 0.99
HLA-A-206	ENST00000479320	IGKV6D-41	A0A0C4DH26	115 aa		21.2	■□□□□ 0.98
HLA-A-206	ENST00000479320	ZKSCAN1	P17029	563 aa	Predicted RBP	21.2	■□□□□ 0.98
HLA-A-206	ENST00000479320	PPARA	Q07869	468 aa		21.2	■□□□□ 0.98
HLA-A-206	ENST00000479320	APBA2	Q99767	749 aa		21.2	■□□□□ 0.98
HLA-A-206	ENST00000479320	HELLS	Q9NRZ9	838 aa		21.2	■□□□□ 0.98
HLA-A-206	ENST00000479320	IVNS1ABP	Q9Y6Y0	642 aa		21.2	■□□□□ 0.98
HLA-A-206	ENST00000479320	MYH4	Q9Y623	1939 aa		21.2	■□□□□ 0.98
HLA-A-206	ENST00000479320	COL11A1	P12107	1806 aa	Predicted RBP	21.19	■□□□□ 0.98
HLA-A-206	ENST00000479320	TRIM6-TRIM34	B2RNG4	842 aa		21.19	■□□□□ 0.98
HLA-A-206	ENST00000479320	RAD21	O60216	631 aa		21.19	■□□□□ 0.98
HLA-A-206	ENST00000479320	FARP2	O94887	1054 aa	Predicted RBP	21.19	■□□□□ 0.98
HLA-A-206	ENST00000479320	PRKAR2A	P13861	404 aa	Known RBP	21.19	■□□□□ 0.98
HLA-A-206	ENST00000479320	PDE4B	Q07343	736 aa		21.19	■□□□□ 0.98
HLA-A-206	ENST00000479320	GRB14	Q14449	540 aa		21.19	■□□□□ 0.98
HLA-A-206	ENST00000479320	VPS53	Q5VIR6	699 aa		21.19	■□□□□ 0.98
HLA-A-206	ENST00000479320	SAMD1	Q6SPF0	538 aa	Predicted RBP	21.19	■□□□□ 0.98
HLA-A-206	ENST00000479320	TICAM2	Q86XR7	235 aa		21.19	■□□□□ 0.98

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