RNA–Protein interactions for RNA: ENST00000479136.5

GSDMB-209, Transcript of gasdermin B, humanhuman

TSL 1 (best)

Gene GSDMB, Length 2,209 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSDMB-209ENST00000479136 CTDSPL2Q05D32 466 aa12.5□□□□□ -0.41
GSDMB-209ENST00000479136 COL9A3Q14050 684 aaPredicted RBP12.5□□□□□ -0.41
GSDMB-209ENST00000479136 RPUSD2Q8IZ73 545 aaKnown RBP12.5□□□□□ -0.41
GSDMB-209ENST00000479136 RNF214Q8ND24 703 aa12.5□□□□□ -0.41
GSDMB-209ENST00000479136 SH2B1Q9NRF2 756 aaPredicted RBP12.5□□□□□ -0.41
GSDMB-209ENST00000479136 GOLGA6AQ9NYA3 693 aa12.5□□□□□ -0.41
GSDMB-209ENST00000479136 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.5□□□□□ -0.41
GSDMB-209ENST00000479136 IMPDH2P12268 514 aa12.5□□□□□ -0.41
GSDMB-209ENST00000479136 MFSD6Q6ZSS7 791 aa12.5□□□□□ -0.41
GSDMB-209ENST00000479136 TBC1D10CQ8IV04 446 aa12.5□□□□□ -0.41
GSDMB-209ENST00000479136 GTF3C6Q969F1 213 aa12.5□□□□□ -0.41
GSDMB-209ENST00000479136 MXD3Q9BW11 206 aa12.5□□□□□ -0.41
GSDMB-209ENST00000479136 KCNF1Q9H3M0 494 aa12.5□□□□□ -0.41
GSDMB-209ENST00000479136 RBM27Q9P2N5 1060 aaKnown RBP12.5□□□□□ -0.41
GSDMB-209ENST00000479136 BTDP43251 543 aa12.49□□□□□ -0.41
GSDMB-209ENST00000479136 PPARAQ07869 468 aa12.49□□□□□ -0.41
GSDMB-209ENST00000479136 PDIA5Q14554 519 aa12.49□□□□□ -0.41
GSDMB-209ENST00000479136 RRP12Q5JTH9 1297 aaKnown RBP12.49□□□□□ -0.41
GSDMB-209ENST00000479136 BRF1Q92994 677 aa12.49□□□□□ -0.41
GSDMB-209ENST00000479136 ALDH8A1Q9H2A2 487 aaPredicted RBP12.49□□□□□ -0.41
GSDMB-209ENST00000479136 ARGLU1Q9NWB6 273 aaPredicted RBP12.49□□□□□ -0.41
GSDMB-209ENST00000479136 TPCN1Q9ULQ1 816 aa12.49□□□□□ -0.41
GSDMB-209ENST00000479136 TTF2Q9UNY4 1162 aaKnown RBP12.49□□□□□ -0.41
GSDMB-209ENST00000479136 SUGT1Q9Y2Z0 365 aa12.49□□□□□ -0.41
GSDMB-209ENST00000479136 ELP1O95163 1332 aa12.49□□□□□ -0.41
GSDMB-209ENST00000479136 PRC1O43663 620 aa12.49□□□□□ -0.41
GSDMB-209ENST00000479136 KDM4AO75164 1064 aa12.49□□□□□ -0.41
GSDMB-209ENST00000479136 SKILP12757 684 aa12.49□□□□□ -0.41
GSDMB-209ENST00000479136 MRPL12P52815 198 aaKnown RBP12.49□□□□□ -0.41
GSDMB-209ENST00000479136 STK3Q13188 491 aa12.49□□□□□ -0.41
GSDMB-209ENST00000479136 TOB2Q14106 344 aaPredicted RBP12.49□□□□□ -0.41
GSDMB-209ENST00000479136 NAA30Q147X3 362 aaPredicted RBP12.49□□□□□ -0.41
GSDMB-209ENST00000479136 TBC1D25Q3MII6 688 aa12.49□□□□□ -0.41
GSDMB-209ENST00000479136 CCDC83Q8IWF9 413 aa12.49□□□□□ -0.41
GSDMB-209ENST00000479136 REXO1L1PQ8IX06 675 aa12.49□□□□□ -0.41
GSDMB-209ENST00000479136 AMOTL1Q8IY63 956 aa12.49□□□□□ -0.41
GSDMB-209ENST00000479136 LARGE2Q8N3Y3 721 aa12.49□□□□□ -0.41
GSDMB-209ENST00000479136 SH3RF3Q8TEJ3 882 aaPredicted RBP12.49□□□□□ -0.41
GSDMB-209ENST00000479136 RNF41Q9H4P4 317 aaPredicted RBP12.49□□□□□ -0.41
GSDMB-209ENST00000479136 ATP8A2Q9NTI2 1148 aa12.49□□□□□ -0.41
GSDMB-209ENST00000479136 CD2APQ9Y5K6 639 aa12.49□□□□□ -0.41
GSDMB-209ENST00000479136 USP17L3A6NCW0 530 aa12.48□□□□□ -0.41
GSDMB-209ENST00000479136 USP17L4A6NCW7 530 aa12.48□□□□□ -0.41
GSDMB-209ENST00000479136 SNUPNO95149 360 aaKnown RBP12.48□□□□□ -0.41
GSDMB-209ENST00000479136 EXOSC10Q01780 885 aaKnown RBP12.48□□□□□ -0.41
GSDMB-209ENST00000479136 CUL4AQ13619 759 aa12.48□□□□□ -0.41
GSDMB-209ENST00000479136 ME3Q16798 604 aa12.48□□□□□ -0.41
GSDMB-209ENST00000479136 AKNAD1Q5T1N1 836 aa12.48□□□□□ -0.41
GSDMB-209ENST00000479136 GIMAP6Q6P9H5 292 aa12.48□□□□□ -0.41
GSDMB-209ENST00000479136 USP17L1Q7RTZ2 530 aa12.48□□□□□ -0.41
GSDMB-209ENST00000479136 KRT23Q9C075 422 aa12.48□□□□□ -0.41
GSDMB-209ENST00000479136 CNNM2Q9H8M5 875 aa12.48□□□□□ -0.41
GSDMB-209ENST00000479136 KCNQ5Q9NR82 932 aa12.48□□□□□ -0.41
GSDMB-209ENST00000479136 ZNF277Q9NRM2 450 aaPredicted RBP12.48□□□□□ -0.41
GSDMB-209ENST00000479136 ZNF232Q9UNY5 417 aa12.48□□□□□ -0.41
GSDMB-209ENST00000479136 BCS1LQ9Y276 419 aa12.48□□□□□ -0.41
GSDMB-209ENST00000479136 MAST2Q6P0Q8 1798 aa12.48□□□□□ -0.41
GSDMB-209ENST00000479136 B4E1Z4 1266 aa12.47□□□□□ -0.41
GSDMB-209ENST00000479136 PRPF40AO75400 957 aaKnown RBP12.47□□□□□ -0.41
GSDMB-209ENST00000479136 CDKL5O76039 1030 aa12.47□□□□□ -0.41
GSDMB-209ENST00000479136 LARGE1O95461 756 aa12.47□□□□□ -0.41
GSDMB-209ENST00000479136 PLCG2P16885 1265 aa12.47□□□□□ -0.41
GSDMB-209ENST00000479136 SCNN1DP51172 638 aa12.47□□□□□ -0.41
GSDMB-209ENST00000479136 STRIP1Q5VSL9 837 aa12.47□□□□□ -0.41
GSDMB-209ENST00000479136 RBM12BQ8IXT5 1001 aaKnown RBP12.47□□□□□ -0.41
GSDMB-209ENST00000479136 CERS5Q8N5B7 392 aa12.47□□□□□ -0.41
GSDMB-209ENST00000479136 NECAB1Q8N987 351 aa12.47□□□□□ -0.41
GSDMB-209ENST00000479136 INTS4Q96HW7 963 aaKnown RBP12.47□□□□□ -0.41
GSDMB-209ENST00000479136 MCM9Q9NXL9 1143 aa12.47□□□□□ -0.41
GSDMB-209ENST00000479136 MCM8Q9UJA3 840 aa12.47□□□□□ -0.41
GSDMB-209ENST00000479136 USP17L12C9JPN9 530 aa12.47□□□□□ -0.41
GSDMB-209ENST00000479136 USP17L21D6R901 530 aa12.47□□□□□ -0.41
GSDMB-209ENST00000479136 SLU7O95391 586 aaKnown RBP12.47□□□□□ -0.41
GSDMB-209ENST00000479136 SLC3A2P08195 630 aaKnown RBP12.47□□□□□ -0.41
GSDMB-209ENST00000479136 SLC4A8Q2Y0W8 1093 aa12.47□□□□□ -0.41
GSDMB-209ENST00000479136 NCAPG2Q86XI2 1143 aa12.47□□□□□ -0.41
GSDMB-209ENST00000479136 TGFBRAP1Q8WUH2 860 aa12.47□□□□□ -0.41
GSDMB-209ENST00000479136 BAG1Q99933 345 aaPredicted RBP12.47□□□□□ -0.41
GSDMB-209ENST00000479136 DCP1AQ9NPI6 582 aaPredicted RBP12.47□□□□□ -0.41
GSDMB-209ENST00000479136 INCENPQ9NQS7 918 aa12.47□□□□□ -0.41
GSDMB-209ENST00000479136 CLIP2Q9UDT6 1046 aa12.47□□□□□ -0.41
GSDMB-209ENST00000479136 ZNF215Q9UL58 517 aaPredicted RBP12.47□□□□□ -0.41
GSDMB-209ENST00000479136 NEDD4P46934 1319 aa12.47□□□□□ -0.41
GSDMB-209ENST00000479136 CCDC88AQ3V6T2 1871 aa12.47□□□□□ -0.41
GSDMB-209ENST00000479136 CYP2D7A0A087X1C5 515 aa12.46□□□□□ -0.41
GSDMB-209ENST00000479136 GPR75-ASB3A0A0A6YYF3 556 aa12.46□□□□□ -0.41
GSDMB-209ENST00000479136 PPP4CP60510 307 aa12.46□□□□□ -0.41
GSDMB-209ENST00000479136 APOBRQ0VD83 1088 aa12.46□□□□□ -0.41
GSDMB-209ENST00000479136 MCM6Q14566 821 aa12.46□□□□□ -0.41
GSDMB-209ENST00000479136 KIAA0825Q8IV33 1275 aa12.46□□□□□ -0.41
GSDMB-209ENST00000479136 MB21D2Q8IYB1 491 aaPredicted RBP12.46□□□□□ -0.41
GSDMB-209ENST00000479136 TEKT1Q969V4 418 aa12.46□□□□□ -0.41
GSDMB-209ENST00000479136 ZNF396Q96N95 335 aaPredicted RBP12.46□□□□□ -0.41
GSDMB-209ENST00000479136 SPON1Q9HCB6 807 aa12.46□□□□□ -0.41
GSDMB-209ENST00000479136 ARPP21Q9UBL0 812 aaPredicted RBP12.46□□□□□ -0.41
GSDMB-209ENST00000479136 RTN2O75298 545 aa12.46□□□□□ -0.42
GSDMB-209ENST00000479136 PTGER2P43116 358 aa12.46□□□□□ -0.42
GSDMB-209ENST00000479136 PSMD2Q13200 908 aa12.46□□□□□ -0.42
GSDMB-209ENST00000479136 PKP1Q13835 747 aa12.46□□□□□ -0.42
GSDMB-209ENST00000479136 ELF2Q15723 593 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms